LLPS-Brn-0293
BnaA01g27000D
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | BnaA01g27000D protein |
| Gene Name: | BnaA01g27000D, GSBRNA2T00005505001 |
| Ensembl Gene: | GSBRNA2T00101403001 |
| Ensembl Protein: | CDX95557 |
| Organism: | Brassica napus |
| Taxa ID: | 3708 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | CDX95557 | CDX95557 |
| UniProt | A0A078FVQ1, A0A078FVQ1_BRANA | |
| GeneBank | LK032086 | CDY18495.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MRHLIAPPWP LFLLALILLC FFSSGESSPF GEKIKLDTGG LSRQSFPKDF LFGTATSAYQ 60 61 VEGETHQDGR GPSIWDAFVK IPGTIAKNAT AELTVDQYHR YKEDVDLMKK LNFDAYRFSI 120 121 SWSRIFPEGT GKINWKGVDY YNRLINYLIQ KGITPYANLY HYDLPLALEK KYKGLLDRQV 180 181 VNDFADYAEF CFNIFGDRVK NWMTFNEPRV VAALGYDNGI FAPGRCSKSY GNCTQGNSGT 240 241 EPYIVSHHLI LAHAAAAQRY RKYYQAKQKG RIGILLDFVW YEPLTRSKAD YLAAQRARDF 300 301 HIGWFIHPIV YGEYPQTMQN IVKDRLPKFT EEEVKMVKGS IDFVGINQYT TYFMSDTHNA 360 361 TIPKELGYQQ DWNATFGFAK LGKPIGPRAY SYWLYNVPWG MYKALMYMKE RYGNPTMILS 420 421 ENGMDDSGNV TLAQGLHDTT RIKYYKDYLT QLKKAVDDGA NVKGYFAWSL LDNFEWLSGY 480 481 TSRFGIVYVD YKTLKRYPKM SAQWFMQLLK RNKK 514 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGAGGCACC TCATTGCACC TCCGTGGCCT CTCTTTCTTC TTGCCCTCAT CCTCCTCTGT 60 61 TTTTTCAGTT CCGGCGAATC CTCACCGTTC GGAGAGAAGA TTAAACTGGA CACCGGCGGT 120 121 CTAAGTAGAC AGAGTTTTCC AAAGGACTTC TTGTTCGGAA CAGCCACGTC AGCTTATCAG 180 181 GTCGAAGGCG AAACTCATCA AGATGGTCGT GGCCCAAGCA TTTGGGACGC CTTCGTCAAG 240 241 ATTCCTGGGA CTATCGCCAA GAATGCCACG GCTGAGCTAA CAGTGGATCA ATATCATCGT 300 301 TACAAGGAAG ATGTGGATTT GATGAAGAAA CTTAATTTCG ATGCTTATAG ATTTTCCATT 360 361 TCATGGTCCA GAATATTCCC TGAGGGAACC GGTAAAATCA ACTGGAAAGG AGTTGATTAT 420 421 TACAACCGAT TGATCAATTA TTTGATCCAA AAAGGGATTA CACCGTATGC AAATCTGTAC 480 481 CATTACGATC TTCCATTGGC TTTGGAAAAG AAGTATAAAG GCTTGCTTGA TAGACAAGTT 540 541 GTGAATGATT TTGCGGATTA CGCAGAGTTT TGTTTCAATA TATTTGGAGA TAGAGTGAAA 600 601 AACTGGATGA CGTTTAATGA ACCGCGTGTG GTAGCTGCCT TGGGTTATGA TAATGGTATA 660 661 TTCGCACCGG GTAGATGCTC TAAATCGTAT GGAAACTGCA CACAGGGGAA CTCAGGTACT 720 721 GAGCCATACA TTGTTTCCCA TCACCTTATC TTGGCCCATG CAGCAGCCGC CCAAAGATAC 780 781 CGCAAATATT ACCAAGCGAA ACAAAAAGGA AGAATTGGGA TTCTTCTAGA TTTCGTTTGG 840 841 TATGAGCCGC TTACTAGAAG TAAAGCAGAT TATCTTGCAG CTCAAAGGGC AAGAGACTTC 900 901 CATATCGGAT GGTTTATTCA CCCAATAGTA TACGGAGAGT ATCCACAGAC AATGCAGAAT 960 961 ATCGTGAAAG ATAGGCTTCC GAAATTTACA GAGGAGGAAG TGAAAATGGT GAAAGGTTCC 1020 1021 ATAGATTTCG TGGGAATAAA CCAATACACA ACTTATTTCA TGTCAGATAC TCATAACGCC 1080 1081 ACCATACCTA AGGAGCTGGG TTACCAACAA GATTGGAATG CTACTTTCGG GTTTGCAAAG 1140 1141 TTGGGGAAGC CAATTGGTCC AAGGGCGTAC TCTTATTGGT TATACAACGT ACCATGGGGA 1200 1201 ATGTACAAAG CCTTGATGTA CATGAAGGAA CGTTACGGCA ACCCAACTAT GATTCTCTCC 1260 1261 GAAAATGGTA TGGATGATTC AGGCAACGTT ACTTTAGCTC AAGGACTACA CGACACAACG 1320 1321 AGAATCAAGT ACTATAAAGA TTACTTAACT CAACTTAAGA AAGCTGTGGA TGATGGAGCC 1380 1381 AATGTGAAGG GATATTTCGC GTGGTCATTG CTTGATAATT TCGAATGGCT GTCAGGATAT 1440 1441 ACTTCAAGGT TCGGGATCGT CTATGTTGAT TACAAGACCC TGAAGAGGTA CCCCAAGATG 1500 1501 TCTGCACAAT GGTTTATGCA ACTTCTGAAA CGAAACAAGA AATGA 1545 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Bro-2929 | Brassica oleracea | 99.79 | 0.0 | 939 |
| LLPS-Brr-2551 | Brassica rapa | 98.55 | 0.0 | 926 |
| LLPS-Arl-0645 | Arabidopsis lyrata | 92.53 | 0.0 | 896 |
| LLPS-Art-1325 | Arabidopsis thaliana | 90.46 | 0.0 | 881 |
| LLPS-Thc-0764 | Theobroma cacao | 82.47 | 0.0 | 772 |
| LLPS-Glm-0517 | Glycine max | 81.46 | 0.0 | 798 |
| LLPS-Via-1819 | Vigna angularis | 80.83 | 0.0 | 788 |
| LLPS-Mae-2210 | Manihot esculenta | 80.83 | 0.0 | 790 |
| LLPS-Phv-1589 | Phaseolus vulgaris | 80.0 | 0.0 | 781 |
| LLPS-Pot-2061 | Populus trichocarpa | 79.83 | 0.0 | 777 |
| LLPS-Met-0678 | Medicago truncatula | 79.58 | 0.0 | 775 |
| LLPS-Cus-1012 | Cucumis sativus | 79.3 | 0.0 | 776 |
| LLPS-Prp-2579 | Prunus persica | 78.96 | 0.0 | 775 |
| LLPS-Viv-2057 | Vitis vinifera | 78.57 | 0.0 | 771 |
| LLPS-Hea-0511 | Helianthus annuus | 78.44 | 0.0 | 763 |
| LLPS-Mua-1794 | Musa acuminata | 75.78 | 0.0 | 739 |
| LLPS-Dac-0473 | Daucus carota | 75.58 | 0.0 | 748 |
| LLPS-Sol-1760 | Solanum lycopersicum | 75.31 | 0.0 | 745 |
| LLPS-Sot-1378 | Solanum tuberosum | 75.1 | 0.0 | 737 |
| LLPS-Vir-2126 | Vigna radiata | 74.38 | 0.0 | 699 |
| LLPS-Coc-1660 | Corchorus capsularis | 73.39 | 0.0 | 685 |
| LLPS-Nia-0723 | Nicotiana attenuata | 73.39 | 0.0 | 732 |
| LLPS-Amt-1760 | Amborella trichopoda | 73.17 | 0.0 | 717 |
| LLPS-Orb-0676 | Oryza barthii | 72.63 | 0.0 | 701 |
| LLPS-Ori-1658 | Oryza indica | 72.42 | 0.0 | 701 |
| LLPS-Orni-2297 | Oryza nivara | 72.42 | 0.0 | 701 |
| LLPS-Orr-0583 | Oryza rufipogon | 72.42 | 0.0 | 701 |
| LLPS-Ors-1046 | Oryza sativa | 72.42 | 0.0 | 701 |
| LLPS-Sob-1890 | Sorghum bicolor | 71.67 | 0.0 | 701 |
| LLPS-Gor-1548 | Gossypium raimondii | 71.49 | 0.0 | 712 |
| LLPS-Orbr-1749 | Oryza brachyantha | 71.05 | 0.0 | 696 |
| LLPS-Zem-0434 | Zea mays | 69.13 | 0.0 | 663 |
| LLPS-Orp-1239 | Oryza punctata | 68.71 | 0.0 | 651 |
| LLPS-Hov-2172 | Hordeum vulgare | 68.62 | 0.0 | 637 |
| LLPS-Tru-0512 | Triticum urartu | 68.57 | 0.0 | 644 |
| LLPS-Sei-1481 | Setaria italica | 67.99 | 0.0 | 643 |
| LLPS-Tra-1152 | Triticum aestivum | 67.64 | 0.0 | 646 |
| LLPS-Brd-1343 | Brachypodium distachyon | 67.43 | 0.0 | 644 |
| LLPS-Sem-1783 | Selaginella moellendorffii | 66.46 | 0.0 | 636 |
| LLPS-Lep-2084 | Leersia perrieri | 64.98 | 0.0 | 622 |
| LLPS-Orm-0130 | Oryza meridionalis | 64.77 | 0.0 | 625 |
| LLPS-Org-1390 | Oryza glaberrima | 64.56 | 0.0 | 625 |
| LLPS-Orgl-2271 | Oryza glumaepatula | 62.89 | 0.0 | 614 |