LLPS-Brn-0277
BnaC05g10620D
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | BnaC05g10620D protein |
| Gene Name: | BnaC05g10620D, GSBRNA2T00067735001 |
| Ensembl Gene: | GSBRNA2T00067735001 |
| Ensembl Protein: | CDY39317 |
| Organism: | Brassica napus |
| Taxa ID: | 3708 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | CDY39317 | CDY39317 |
| UniProt | A0A078HN63, A0A078HN63_BRANA | |
| GeneBank | LK032445 | CDY39317.1 |
| RefSeq | XM_013841168.1, XM_013841169.1, XM_013841170.1, XM_013841171.1, XM_013841172.1 | XP_013696622.1, XP_013696623.1, XP_013696624.1, XP_013696625.1, XP_013696626.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MGKTPGKWIK TLLLGKKSPK SNLVVSAVKD DFSNLSLDPP VASSQPDTAS SAQNVVPPSN 60 61 GDDLEPRSDV DELKLGQAAS KIQAVFRARQ ARRAIRTLKG IIRLQAVIRG HLVRRQAVAT 120 121 YSCIWGIVKF QALVRGRIAR SSSDSVVQCH KPNMEVNDSE ALQVSMCSWM NDPSKFIIVR 180 181 KLLASSPTAL PLKIQYGPEE PNSANVWLER WTQLHVWSPP PRVAKILVPQ TKTKKRSYQA 240 241 VVDSEKARPK QGVKKQSVPA SGKGSNRSST TESEKPKRST VRKASTLSKD PLRIESDKAK 300 301 HKPRKSRSAA SKEEVKEEKP RPSLKRSSLS NSSLKVTRKS AEKRKETVDS VQIEPEVKVS 360 361 DNVESAEKEK DAADCVQIEP EVKVLDVLEG GGDDVESAEK EKDTAESVQI EPEVRVSGVL 420 421 EEGGDAVESA EKEKDSADSV QMETEVKVSD DLQGGEKEKD TTDVVAKELG VEEKEKSSEE 480 481 DELRTTETND KDEEDLKCSD VKVSSENGNI SSDNSKPSER RVSPHYQDEG RTHSGRKIHS 540 541 YMAPTASTLR RHSLPSPANG KPGVTTTMSP RAHKLLLASA KGSMNGDKSA SSSKNKSDKS 600 601 NKTEWKR 607 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGGAAAGA CACCTGGTAA ATGGATCAAG ACTTTGCTTC TCGGGAAGAA GTCACCAAAG 60 61 TCTAATCTTG TTGTGTCGGC GGTGAAGGAT GATTTTTCAA ACTTATCCCT TGACCCTCCT 120 121 GTGGCTTCAT CACAACCGGA TACAGCTTCA TCTGCTCAAA ATGTTGTTCC CCCAAGCAAC 180 181 GGTGATGATC TTGAGCCGAG GAGTGATGTG GATGAACTCA AGCTTGGACA AGCTGCAAGT 240 241 AAGATTCAGG CCGTTTTCAG AGCTCGTCAG GCACGTAGAG CGATTCGGAC CCTTAAAGGT 300 301 ATCATCAGGC TGCAAGCAGT TATCCGTGGT CACCTGGTCA GAAGACAAGC CGTTGCTACT 360 361 TATTCATGTA TTTGGGGTAT TGTGAAGTTT CAGGCCCTTG TTCGTGGCCG CATAGCTAGA 420 421 TCTTCTTCAG ACAGTGTGGT TCAGTGTCAC AAACCAAATA TGGAAGTTAA TGATTCCGAA 480 481 GCTTTGCAAG TGAGCATGTG TAGTTGGATG AATGATCCTT CAAAATTCAT CATTGTCAGA 540 541 AAGCTTCTGG CTTCATCACC AACCGCATTG CCTCTGAAGA TCCAGTACGG TCCTGAGGAA 600 601 CCTAACTCAG CTAACGTTTG GCTAGAACGC TGGACACAGT TGCATGTTTG GTCTCCTCCT 660 661 CCACGAGTAG CTAAGATTCT TGTTCCACAA ACTAAGACGA AGAAGCGAAG TTATCAAGCA 720 721 GTGGTTGACT CAGAAAAGGC GAGACCAAAG CAAGGTGTCA AGAAACAATC AGTCCCAGCT 780 781 AGTGGAAAGG GCTCTAACCG TTCTTCTACA ACTGAAAGTG AGAAACCTAA ACGAAGTACT 840 841 GTGAGGAAGG CTTCCACGCT TAGTAAAGAT CCCCTGAGAA TTGAGAGTGA CAAGGCGAAG 900 901 CACAAGCCAA GAAAGAGTAG AAGCGCCGCC TCAAAGGAGG AGGTTAAAGA AGAGAAGCCT 960 961 AGGCCTAGTC TTAAAAGGTC TTCTCTTTCG AACTCGTCGT TGAAAGTCAC CCGTAAATCT 1020 1021 GCTGAGAAGA GGAAAGAGAC TGTGGATTCT GTGCAGATAG AGCCTGAAGT GAAGGTTTCA 1080 1081 GATAATGTTG AGTCTGCTGA AAAGGAGAAA GATGCGGCAG ATTGTGTGCA GATAGAGCCT 1140 1141 GAAGTGAAGG TTTTGGATGT TCTTGAAGGA GGAGGAGACG ATGTTGAGTC AGCTGAAAAG 1200 1201 GAGAAAGATA CTGCAGAGTC TGTGCAGATA GAGCCTGAAG TGAGGGTTTC AGGTGTTCTT 1260 1261 GAAGAAGGAG GAGACGCTGT TGAATCAGCT GAAAAGGAGA AAGATTCTGC AGATTCTGTT 1320 1321 CAGATGGAGA CTGAAGTGAA GGTCTCAGAT GATCTTCAAG GAGGAGAGAA GGAGAAAGAT 1380 1381 ACCACAGATG TAGTTGCTAA GGAGCTTGGT GTCGAAGAAA AAGAGAAATC ATCAGAGGAA 1440 1441 GATGAACTCA GAACTACAGA GACCAATGAT AAAGATGAAG AAGACCTCAA ATGCTCAGAT 1500 1501 GTGAAGGTAA GCTCTGAGAA TGGTAATATT TCTTCTGATA ACTCAAAGCC AAGTGAAAGA 1560 1561 CGAGTGTCAC CGCACTATCA AGATGAAGGG CGTACACATA GCGGGAGGAA AATCCACAGC 1620 1621 TACATGGCCC CAACTGCATC TACATTGCGG CGCCATTCTC TGCCTTCTCC AGCCAATGGT 1680 1681 AAGCCGGGTG TTACTACTAC TATGTCTCCA AGGGCTCACA AGCTTCTCCT AGCCTCGGCC 1740 1741 AAAGGATCTA TGAACGGCGA CAAATCTGCT TCTTCTTCGA AGAACAAAAG TGATAAGTCA 1800 1801 AACAAAACCG AGTGGAAACG GTGA 1824 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Brr-2669 | Brassica rapa | 86.33 | 0.0 | 894 |
| LLPS-Arl-2487 | Arabidopsis lyrata | 62.95 | 0.0 | 610 |
| LLPS-Art-1576 | Arabidopsis thaliana | 61.37 | 0.0 | 608 |
| LLPS-Bro-0689 | Brassica oleracea | 47.4 | 1e-26 | 118 |
| LLPS-Dac-1011 | Daucus carota | 46.15 | 5e-25 | 113 |
| LLPS-Prp-1752 | Prunus persica | 42.33 | 5e-46 | 176 |
| LLPS-Coc-2084 | Corchorus capsularis | 40.16 | 5e-17 | 89.4 |
| LLPS-Sol-2269 | Solanum lycopersicum | 40.0 | 8e-13 | 75.9 |
| LLPS-Sot-1298 | Solanum tuberosum | 40.0 | 6e-13 | 76.3 |
| LLPS-Thc-0897 | Theobroma cacao | 39.67 | 4e-15 | 83.2 |
| LLPS-Lep-1861 | Leersia perrieri | 39.66 | 2e-14 | 80.9 |
| LLPS-Viv-0990 | Vitis vinifera | 38.79 | 4e-13 | 76.6 |
| LLPS-Via-0197 | Vigna angularis | 38.71 | 1e-11 | 72.0 |
| LLPS-Orbr-0358 | Oryza brachyantha | 37.93 | 8e-13 | 75.9 |
| LLPS-Orni-0575 | Oryza nivara | 37.93 | 4e-12 | 73.6 |
| LLPS-Phv-0730 | Phaseolus vulgaris | 37.7 | 2e-11 | 71.2 |
| LLPS-Ors-0678 | Oryza sativa | 36.67 | 2e-12 | 74.3 |
| LLPS-Orr-2328 | Oryza rufipogon | 36.67 | 2e-12 | 74.7 |
| LLPS-Orm-1574 | Oryza meridionalis | 36.67 | 7e-13 | 76.3 |
| LLPS-Ori-0608 | Oryza indica | 36.67 | 2e-12 | 74.3 |
| LLPS-Orb-0354 | Oryza barthii | 36.67 | 2e-12 | 74.7 |
| LLPS-Orgl-2343 | Oryza glumaepatula | 36.67 | 2e-12 | 74.7 |
| LLPS-Hea-1925 | Helianthus annuus | 35.9 | 1e-10 | 68.6 |
| LLPS-Orp-0656 | Oryza punctata | 35.83 | 2e-12 | 74.7 |
| LLPS-Met-2363 | Medicago truncatula | 35.81 | 1e-23 | 109 |
| LLPS-Nia-1429 | Nicotiana attenuata | 35.71 | 4e-12 | 73.6 |
| LLPS-Cus-1431 | Cucumis sativus | 35.71 | 6e-12 | 72.8 |
| LLPS-Brd-2403 | Brachypodium distachyon | 35.34 | 9e-11 | 69.3 |
| LLPS-Gor-2642 | Gossypium raimondii | 35.0 | 7e-12 | 72.8 |
| LLPS-Vir-1300 | Vigna radiata | 34.82 | 1e-07 | 58.9 |
| LLPS-Hov-1543 | Hordeum vulgare | 34.71 | 6e-10 | 66.6 |
| LLPS-Mua-0083 | Musa acuminata | 34.48 | 3e-11 | 70.5 |
| LLPS-Sei-1779 | Setaria italica | 34.48 | 1e-09 | 65.5 |
| LLPS-Tru-0260 | Triticum urartu | 34.17 | 9e-09 | 62.8 |
| LLPS-Tra-0307 | Triticum aestivum | 34.17 | 1e-09 | 65.9 |
| LLPS-Pot-1227 | Populus trichocarpa | 32.48 | 3e-14 | 80.5 |
| LLPS-Zem-1502 | Zea mays | 31.67 | 2e-10 | 68.6 |
| LLPS-Sob-1972 | Sorghum bicolor | 30.83 | 3e-09 | 64.3 |
| LLPS-Mae-0725 | Manihot esculenta | 30.18 | 1e-14 | 81.6 |