DrLLPS - Data resource of LLPS

LLPS-Brn-0272

Integrated Annotations

▼ OVERVIEW


Status:	Unreviewed
Ensembl Gene:	GSBRNA2T00127644001
Ensembl Protein:	CDX77068
Organism:	Brassica napus
Taxa ID:	3708
LLPS Type:	Others

▼ PROPERTY

——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:

Condensate	Evidence	Orthologs
Nucleolus	Predicted from orthologs	(View)

Organism	DrLLPS ID	UniProt ID	LLPS type	Condensate	Identity	E-value	Score
Arabidopsis thaliana	LLPS-Art-0564	Q9ZVD0	Client	Nucleolus	33.33	1e-49	177

▼ CROSS REFERENCE

Database	Nucleotide ID	Protein ID
Ensembl	CDX77068	CDX77068

▼ SEQUENCE

Protein Sequence (FASTA)
1 MADVTLPPPD SVDIRPPENT TTSLPPPQQD HEPQEQQQPP QRDSRERRDD RDLERPPNRC 60 61 DRSPLPPPPR RDYKRRPSGS PPPPYRDRRH SPPMRRSPPP PKRYRRDDNG YDGRRGGGYG 120 121 PPDRRFGYEN DREMGGRHGY GDERPPGRFM GRYQDWEGGR GGYGDASNRG STQRDGLMSY 180 181 KQFIQELEDD ILPSEAERRY QEYKSEYITT QKRVYFNTHK EEEWLKDKYH PTNLLTVIEK 240 241 RNEHARKVAK DFLLELQSGN LDLGPAVTAL NKTSEPKSED EAGGGGGGKR GKESDFSAAP 300 301 KAPSFTSDPK RILTDIEQAQ ALVRKLDSEK GIVDNVLSSS ETETSGKDKS HSGSTGPVII 360 361 IRGLTSVKGL EGVELLDTLI TYLWRVHGVD YYGKVETSEA KGLRHVRAEG KGPDAKGDEG 420 421 EDKFDSHWQQ RLKGQDPLEV MAAKEKLDAA AIEALDPHVR KIRDEKYGWK YGCGAKGCTK 480 481 LFHAAEFVHK HLKLKHAELI VDMTVKVREE LYFQNYMNDP NAPGGQPATQ QPGPRDRPMM 540 541 RRKPSMESRL RDDRGGRRER DRIDRSEDQQ RGDGNGPNGP NPEEGGYDAF GGQGGVHVPS 600 601 YSADMNAPPV LMPVPGAGPL GPFVPAPPEF AMQMFRDPSG PNPPLEGGGR GGPAPFLLSP 660 661 AFRQDPRRLR SYQDLDAPEE EVTVIDYRSL 690
Nucleotide CDS Sequence (FASTA)
1 ATGGCCGATG TGACGCTCCC TCCGCCTGAT TCCGTCGACA TCCGTCCCCC GGAGAATACC 60 61 ACCACCTCTC TTCCTCCGCC ACAGCAGGAC CATGAGCCGC AAGAGCAGCA GCAGCCTCCT 120 121 CAGAGAGATT CCCGCGAGAG ACGCGACGAC AGAGACCTAG AACGTCCGCC TAATCGCTGT 180 181 GACCGTTCTC CCCTCCCGCC GCCGCCCCGC AGGGACTACA AGAGGCGGCC TAGCGGGAGC 240 241 CCTCCGCCGC CGTACAGAGA CAGGCGGCAC TCTCCTCCCA TGCGCCGCTC GCCTCCTCCT 300 301 CCCAAGCGCT ACCGGAGGGA CGATAACGGA TACGATGGTC GGCGTGGTGG TGGCTATGGA 360 361 CCTCCCGATA GAAGATTTGG ATATGAGAAT GACCGTGAAA TGGGTGGAAG GCATGGTTAC 420 421 GGTGATGAAA GACCTCCTGG CCGCTTCATG GGGCGCTATC AAGACTGGGA GGGAGGTCGT 480 481 GGAGGTTATG GTGATGCATC TAACAGAGGA AGTACTCAAA GGGACGGATT GATGTCATAC 540 541 AAGCAGTTTA TCCAGGAGCT GGAAGATGAT ATATTGCCAT CAGAAGCTGA ACGCAGATAT 600 601 CAAGAATACA AGTCAGAGTA TATCACAACA CAGAAACGTG TCTATTTTAA CACTCACAAA 660 661 GAGGAAGAAT GGTTAAAAGA CAAGTATCAT CCAACCAACT TGCTAACTGT CATAGAAAAG 720 721 AGGAATGAAC ATGCACGGAA GGTGGCGAAG GACTTCTTAC TTGAGTTACA GAGCGGGAAT 780 781 CTTGATTTAG GTCCTGCAGT GACAGCACTG AATAAAACAA GTGAGCCAAA GTCTGAGGAT 840 841 GAAGCAGGTG GTGGTGGTGG TGGTAAAAGA GGTAAAGAGA GTGACTTTTC AGCGGCACCA 900 901 AAAGCACCCA GCTTCACTTC TGACCCAAAG AGAATCCTAA CTGACATTGA GCAAGCACAA 960 961 GCCCTTGTTC GTAAGCTGGA CTCTGAGAAA GGAATCGTGG ATAATGTTTT ATCAAGTTCA 1020 1021 GAAACTGAAA CGTCGGGAAA AGATAAGTCG CACAGTGGCT CGACTGGTCC AGTTATAATC 1080 1081 ATAAGAGGTT TGACATCTGT GAAAGGCCTC GAGGGTGTTG AATTGCTTGA CACGCTTATC 1140 1141 ACGTATCTCT GGCGTGTTCA TGGTGTGGAC TATTACGGAA AGGTTGAAAC AAGCGAAGCT 1200 1201 AAGGGTCTGC GGCATGTGAG AGCGGAAGGA AAAGGCCCTG ATGCGAAAGG AGATGAGGGT 1260 1261 GAAGATAAAT TTGATTCTCA TTGGCAACAG AGGTTGAAAG GTCAAGATCC ACTGGAAGTG 1320 1321 ATGGCTGCCA AAGAGAAGCT AGATGCTGCT GCTATTGAAG CTTTAGATCC ACATGTCCGA 1380 1381 AAGATTAGGG ATGAGAAGTA TGGTTGGAAA TATGGTTGTG GAGCTAAAGG CTGCACGAAA 1440 1441 CTGTTTCATG CTGCTGAATT TGTGCACAAG CATCTCAAGC TGAAGCACGC TGAGCTTATA 1500 1501 GTGGATATGA CTGTCAAAGT GCGGGAAGAA CTGTATTTTC AGAACTATAT GAATGATCCT 1560 1561 AATGCTCCAG GAGGACAACC AGCCACGCAG CAACCTGGCC CGAGAGATAG ACCTATGATG 1620 1621 AGACGTAAAC CAAGCATGGA GAGCAGATTG AGGGATGATC GAGGTGGACG CAGAGAGCGT 1680 1681 GACAGAATTG ATCGGTCAGA GGATCAGCAG AGAGGTGATG GTAACGGTCC TAATGGTCCT 1740 1741 AATCCCGAGG AAGGTGGTTA CGATGCATTT GGTGGACAAG GCGGTGTTCA TGTTCCTTCC 1800 1801 TACTCTGCTG ATATGAACGC ACCGCCAGTG CTCATGCCTG TTCCCGGTGC CGGGCCACTA 1860 1861 GGACCATTTG TACCAGCACC ACCTGAGTTT GCAATGCAGA TGTTCAGGGA CCCAAGCGGA 1920 1921 CCAAACCCTC CTTTAGAAGG TGGTGGCAGA GGTGGACCAG CCCCTTTTCT TTTGTCTCCG 1980 1981 GCCTTTAGAC AGGATCCTAG ACGGCTACGC AGCTACCAAG ACCTAGATGC TCCAGAGGAA 2040 2041 GAGGTAACCG TTATTGATTA TAGGAGCTTG TAG 2073

Nucleotide Sequence

>LLPS-Brn-0272|GSBRNA2T00127644001
ATGGCCGATGTGACGCTCCCTCCGCCTGATTCCGTCGACATCCGTCCCCCGGAGAATACCACCACCTCTCTTCCTCCGCCACAGCAGGACCATGAGCCGCAAGAGCAGCAGCAGCCTCCTCAGAGAGATTCCCGCGAGAGACGCGACGACAGAGACCTAGAACGTCCGCCTAATCGCTGTGACCGTTCTCCCCTCCCGCCGCCGCCCCGCAGGGACTACAAGAGGCGGCCTAGCGGGAGCCCTCCGCCGCCGTACAGAGACAGGCGGCACTCTCCTCCCATGCGCCGCTCGCCTCCTCCTCCCAAGCGCTACCGGAGGGACGATAACGGATACGATGGTCGGCGTGGTGGTGGCTATGGACCTCCCGATAGAAGATTTGGATATGAGAATGACCGTGAAATGGGTGGAAGGCATGGTTACGGTGATGAAAGACCTCCTGGCCGCTTCATGGGGCGCTATCAAGACTGGGAGGGAGGTCGTGGAGGTTATGGTGATGCATCTAACAGAGGAAGTACTCAAAGGGACGGATTGATGTCATACAAGCAGTTTATCCAGGAGCTGGAAGATGATATATTGCCATCAGAAGCTGAACGCAGATATCAAGAATACAAGTCAGAGTATATCACAACACAGAAACGTGTCTATTTTAACACTCACAAAGAGGAAGAATGGTTAAAAGACAAGTATCATCCAACCAACTTGCTAACTGTCATAGAAAAGAGGAATGAACATGCACGGAAGGTGGCGAAGGACTTCTTACTTGAGTTACAGAGCGGGAATCTTGATTTAGGTCCTGCAGTGACAGCACTGAATAAAACAAGTGAGCCAAAGTCTGAGGATGAAGCAGGTGGTGGTGGTGGTGGTAAAAGAGGTAAAGAGAGTGACTTTTCAGCGGCACCAAAAGCACCCAGCTTCACTTCTGACCCAAAGAGAATCCTAACTGACATTGAGCAAGCACAAGCCCTTGTTCGTAAGCTGGACTCTGAGAAAGGAATCGTGGATAATGTTTTATCAAGTTCAGAAACTGAAACGTCGGGAAAAGATAAGTCGCACAGTGGCTCGACTGGTCCAGTTATAATCATAAGAGGTTTGACATCTGTGAAAGGCCTCGAGGGTGTTGAATTGCTTGACACGCTTATCACGTATCTCTGGCGTGTTCATGGTGTGGACTATTACGGAAAGGTTGAAACAAGCGAAGCTAAGGGTCTGCGGCATGTGAGAGCGGAAGGAAAAGGCCCTGATGCGAAAGGAGATGAGGGTGAAGATAAATTTGATTCTCATTGGCAACAGAGGTTGAAAGGTCAAGATCCACTGGAAGTGATGGCTGCCAAAGAGAAGCTAGATGCTGCTGCTATTGAAGCTTTAGATCCACATGTCCGAAAGATTAGGGATGAGAAGTATGGTTGGAAATATGGTTGTGGAGCTAAAGGCTGCACGAAACTGTTTCATGCTGCTGAATTTGTGCACAAGCATCTCAAGCTGAAGCACGCTGAGCTTATAGTGGATATGACTGTCAAAGTGCGGGAAGAACTGTATTTTCAGAACTATATGAATGATCCTAATGCTCCAGGAGGACAACCAGCCACGCAGCAACCTGGCCCGAGAGATAGACCTATGATGAGACGTAAACCAAGCATGGAGAGCAGATTGAGGGATGATCGAGGTGGACGCAGAGAGCGTGACAGAATTGATCGGTCAGAGGATCAGCAGAGAGGTGATGGTAACGGTCCTAATGGTCCTAATCCCGAGGAAGGTGGTTACGATGCATTTGGTGGACAAGGCGGTGTTCATGTTCCTTCCTACTCTGCTGATATGAACGCACCGCCAGTGCTCATGCCTGTTCCCGGTGCCGGGCCACTAGGACCATTTGTACCAGCACCACCTGAGTTTGCAATGCAGATGTTCAGGGACCCAAGCGGACCAAACCCTCCTTTAGAAGGTGGTGGCAGAGGTGGACCAGCCCCTTTTCTTTTGTCTCCGGCCTTTAGACAGGATCCTAGACGGCTACGCAGCTACCAAGACCTAGATGCTCCAGAGGAAGAGGTAACCGTTATTGATTATAGGAGCTTGTAG

▼ ORTHOLOGY

DrLLPS ID	Organism	Identity	E-value	Score
LLPS-Bro-2345	Brassica oleracea	100.0	0.0	1001
LLPS-Brr-2806	Brassica rapa	100.0	1e-05	53.1
LLPS-Arl-1005	Arabidopsis lyrata	81.98	0.0	851
LLPS-Art-0564	Arabidopsis thaliana	81.6	0.0	856
LLPS-Dac-0649	Daucus carota	67.24	0.0	540
LLPS-Prp-0643	Prunus persica	67.11	0.0	676
LLPS-Coc-0392	Corchorus capsularis	67.01	0.0	709
LLPS-Thc-1839	Theobroma cacao	67.0	0.0	714
LLPS-Mua-1042	Musa acuminata	66.58	2e-166	503
LLPS-Gor-1586	Gossypium raimondii	66.55	0.0	704
LLPS-Pot-0033	Populus trichocarpa	66.05	0.0	696
LLPS-Mae-0100	Manihot esculenta	65.83	0.0	656
LLPS-Hea-2715	Helianthus annuus	65.58	0.0	636
LLPS-Nia-0046	Nicotiana attenuata	65.49	0.0	671
LLPS-Viv-1290	Vitis vinifera	65.43	0.0	650
LLPS-Amt-1989	Amborella trichopoda	65.24	4e-164	497
LLPS-Sol-1028	Solanum lycopersicum	64.98	0.0	663
LLPS-Cus-0745	Cucumis sativus	62.63	0.0	644
LLPS-Glm-1779	Glycine max	61.69	0.0	645
LLPS-Vir-1976	Vigna radiata	61.57	0.0	580
LLPS-Phv-1688	Phaseolus vulgaris	61.32	0.0	625
LLPS-Via-1867	Vigna angularis	60.94	0.0	617
LLPS-Met-1120	Medicago truncatula	60.07	0.0	591
LLPS-Lep-1342	Leersia perrieri	59.3	4e-17	89.0
LLPS-Zem-0095	Zea mays	59.27	0.0	565
LLPS-Sei-2258	Setaria italica	58.57	0.0	549
LLPS-Tru-1451	Triticum urartu	58.41	0.0	553
LLPS-Sob-2081	Sorghum bicolor	58.33	2e-179	536
LLPS-Orbr-1024	Oryza brachyantha	57.22	5e-138	422
LLPS-Brd-2060	Brachypodium distachyon	56.39	6e-180	538
LLPS-Orm-1303	Oryza meridionalis	56.12	0.0	551
LLPS-Orp-0746	Oryza punctata	56.06	0.0	542
LLPS-Org-0765	Oryza glaberrima	55.97	0.0	541
LLPS-Ori-1816	Oryza indica	55.94	0.0	549
LLPS-Orr-2344	Oryza rufipogon	55.85	0.0	544
LLPS-Orb-1485	Oryza barthii	55.85	0.0	543
LLPS-Ors-1798	Oryza sativa	55.8	0.0	541
LLPS-Orgl-1063	Oryza glumaepatula	55.72	1e-178	532
LLPS-Hov-0256	Hordeum vulgare	55.72	8e-176	520
LLPS-Orni-1785	Oryza nivara	55.58	4e-180	535
LLPS-Php-0680	Physcomitrella patens	55.49	1e-120	385
LLPS-Tra-1741	Triticum aestivum	55.46	0.0	548
LLPS-Sem-1980	Selaginella moellendorffii	46.98	2e-135	414
LLPS-Anc-0714	Anolis carolinensis	41.82	2e-06	55.5
LLPS-Lac-2010	Latimeria chalumnae	41.82	7e-07	57.0
LLPS-Asm-1224	Astyanax mexicanus	41.82	9e-07	56.6
LLPS-Pes-1185	Pelodiscus sinensis	40.0	3e-06	54.7
LLPS-Scf-1144	Scleropages formosus	40.0	2e-06	55.5
LLPS-Xim-3547	Xiphophorus maculatus	40.0	2e-06	55.5
LLPS-Icp-0569	Ictalurus punctatus	40.0	4e-06	54.7
LLPS-Orn-1654	Oreochromis niloticus	38.33	2e-07	58.5
LLPS-Dar-0811	Danio rerio	38.18	4e-06	54.3
LLPS-Gaa-0520	Gasterosteus aculeatus	37.04	4e-07	57.8
LLPS-Scm-0174	Scophthalmus maximus	35.8	2e-07	58.5
LLPS-Orl-1570	Oryzias latipes	35.8	3e-07	58.2
LLPS-Pof-1494	Poecilia formosa	35.59	3e-06	55.1
LLPS-Dio-0807	Dipodomys ordii	34.44	6e-07	57.4
LLPS-Myl-1373	Myotis lucifugus	34.44	1e-07	59.3
LLPS-Mea-4033	Mesocricetus auratus	34.44	1e-07	59.7
LLPS-Mum-1770	Mus musculus	34.44	1e-07	59.3
LLPS-Eqc-1797	Equus caballus	33.33	2e-07	58.5
LLPS-Cap-3060	Cavia porcellus	33.33	2e-07	58.5
LLPS-Caf-1460	Canis familiaris	33.33	2e-07	58.5
LLPS-Ict-2850	Ictidomys tridecemlineatus	33.33	2e-07	58.5
LLPS-Loa-2481	Loxodonta africana	33.33	2e-07	58.5
LLPS-Fec-0683	Felis catus	33.33	2e-07	58.5
LLPS-Urm-0481	Ursus maritimus	33.33	2e-07	58.5
LLPS-Otg-0942	Otolemur garnettii	33.33	2e-07	58.5
LLPS-Bot-1808	Bos taurus	33.33	3e-07	58.2
LLPS-Tut-1617	Tursiops truncatus	33.33	2e-07	58.5
LLPS-Mup-3391	Mustela putorius furo	33.33	2e-07	58.5
LLPS-Aim-0105	Ailuropoda melanoleuca	33.33	2e-07	58.9
LLPS-Sus-0216	Sus scrofa	33.33	2e-07	58.5
LLPS-Fud-3210	Fukomys damarensis	33.33	3e-07	58.2
LLPS-Tar-1616	Takifugu rubripes	32.67	1e-06	56.2
LLPS-Mam-3438	Macaca mulatta	32.22	1e-06	56.6
LLPS-Poa-0169	Pongo abelii	32.22	3e-07	57.8
LLPS-Nol-1304	Nomascus leucogenys	32.22	7e-07	57.0
LLPS-Cas-0717	Carlito syrichta	32.22	4e-07	57.8
LLPS-Man-2942	Macaca nemestrina	32.22	1e-06	56.6
LLPS-Pat-2547	Pan troglodytes	32.22	4e-07	57.8
LLPS-Pap-0293	Pan paniscus	32.22	4e-07	57.8
LLPS-Hos-0393	Homo sapiens	32.22	4e-07	57.8
LLPS-Rhb-1015	Rhinopithecus bieti	32.22	1e-06	56.6
LLPS-Ova-3247	Ovis aries	32.22	1e-06	56.6
LLPS-Mal-1041	Mandrillus leucophaeus	32.22	1e-06	56.6
LLPS-Paa-3258	Papio anubis	32.22	1e-06	56.6
LLPS-Cea-1403	Cercocebus atys	32.22	1e-06	56.6
LLPS-Aon-2459	Aotus nancymaae	32.22	4e-07	57.8
LLPS-Leo-1087	Lepisosteus oculatus	32.22	8e-07	56.6
LLPS-Chs-0881	Chlorocebus sabaeus	32.22	1e-06	56.6
LLPS-Maf-1119	Macaca fascicularis	32.22	1e-06	56.6
LLPS-Caj-0146	Callithrix jacchus	32.22	5e-07	57.4
LLPS-Gog-2520	Gorilla gorilla	32.22	4e-07	57.8
LLPS-Cae-0639	Caenorhabditis elegans	31.85	5e-07	57.4
LLPS-Drm-0337	Drosophila melanogaster	28.91	6e-08	60.5
LLPS-Osl-0939	Ostreococcus lucimarinus	28.73	4e-18	91.7
LLPS-Chr-0431	Chlamydomonas reinhardtii	27.09	2e-26	119
LLPS-Abg-0428	Absidia glauca	25.21	1e-09	65.9

LLPS-Brn-0272

Protein Sequence

Nucleotide Sequence