LLPS-Brn-0046
BnaC09g11820D
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Reticulon-like protein |
| Gene Name: | BnaC09g11820D, GSBRNA2T00032815001 |
| Ensembl Gene: | GSBRNA2T00032815001 |
| Ensembl Protein: | CDY25557 |
| Organism: | Brassica napus |
| Taxa ID: | 3708 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | CDY25557 | CDY25557 |
| UniProt | A0A078GKB0, A0A078GKB0_BRANA | |
| GeneBank | LK032176 | CDY25557.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MAEEHKHEES IMEKIAEKIH GHDNSSSSDS DDEKKASSIK TKIYRLFGRE KPVHKVFGGG 60 61 KPADIFLWRN KKVSGGVLGA ATLSWILFEL LQYNLLTLFG HISILALAVL FLWSSATTFI 120 121 HKTPPHIPEV HIPEDVVLQL ASGLRNEINR GFTLLRNIAL GRDLKKFLMV VAGLWVLSKV 180 181 GSSCNFLTLI YIATVLLFTV PVLYEKYEDK VDDFGEKAMK EIKKQYAVLD EKVLSKVMSK 240 241 IPRGAFNKKK D 251 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCGGAAG AGCACAAGCA CGAGGAATCG ATCATGGAGA AGATCGCGGA GAAGATCCAT 60 61 GGCCACGATA ACTCTTCTTC TTCAGATTCA GATGACGAGA AGAAAGCGTC GTCTATCAAG 120 121 ACGAAGATCT ACCGCCTCTT CGGAAGAGAA AAGCCTGTCC ACAAGGTCTT CGGTGGCGGA 180 181 AAACCTGCCG ACATATTCCT GTGGAGGAAC AAGAAGGTAT CAGGAGGAGT GTTGGGTGCT 240 241 GCAACTCTCT CCTGGATCTT ATTCGAGTTG CTTCAGTACA ACCTCCTCAC TCTCTTCGGC 300 301 CACATCTCGA TCCTTGCTCT CGCTGTGTTG TTCTTGTGGT CTAGTGCTAC TACCTTCATT 360 361 CACAAGACGC CTCCTCATAT TCCTGAAGTG CACATCCCCG AGGATGTTGT TCTCCAGCTT 420 421 GCCTCTGGGC TCAGGAATGA AATCAATCGT GGTTTTACTC TTCTTAGGAA CATTGCGTTA 480 481 GGAAGAGATC TCAAGAAGTT CCTTATGGTT GTTGCTGGGT TGTGGGTTTT GTCCAAAGTT 540 541 GGTAGCTCAT GCAACTTCTT GACCTTGATC TATATCGCAA CTGTTCTTCT CTTCACTGTC 600 601 CCCGTGCTTT ACGAAAAGTA TGAGGATAAA GTAGATGACT TTGGTGAAAA GGCAATGAAG 660 661 GAGATCAAGA AGCAATACGC TGTGCTCGAT GAGAAGGTTT TGAGCAAGGT GATGAGCAAA 720 721 ATCCCAAGAG GAGCCTTCAA CAAGAAGAAG GATTAG 756 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Bro-2560 | Brassica oleracea | 99.2 | 1e-166 | 468 |
| LLPS-Brr-0955 | Brassica rapa | 96.02 | 6e-161 | 454 |
| LLPS-Arl-1384 | Arabidopsis lyrata | 86.22 | 2e-145 | 415 |
| LLPS-Art-0787 | Arabidopsis thaliana | 80.81 | 5e-141 | 404 |
| LLPS-Hea-2762 | Helianthus annuus | 31.03 | 1e-07 | 56.2 |
| LLPS-Zem-2261 | Zea mays | 28.57 | 7e-06 | 50.8 |
| LLPS-Viv-2403 | Vitis vinifera | 25.81 | 2e-07 | 55.8 |
| LLPS-Php-1788 | Physcomitrella patens | 25.67 | 4e-09 | 60.5 |