LLPS-Asn-0866
fip1
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Pre-mRNA polyadenylation factor fip1 |
Gene Name: | fip1, AN2433 |
Ensembl Gene: | ANIA_02433 |
Ensembl Protein: | CBF86845 |
Organism: | Aspergillus nidulans |
Taxa ID: | 227321 |
LLPS Type: | Regulator |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Histone locus body | Predicted from orthologs | (View) |
▼ FUNCTION
Pre-mRNA polyadenylation factor that directly interacts with poly(A) polymerase. |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | CBF86845 | CBF86845 |
UniProt | Q5BAJ7, FIP1_EMENI, C8VNZ9 | |
GeneBank | AACD01000040, BN001307 | EAA64139.1, CBF86845.1 |
RefSeq | XM_654945.1 | XP_660037.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MSHAMDDDDD DLYDPADAVP VTNPSDPRGP SADAPMNDNV EEEEEEVEED DEDDFNIITE 60 61 APPDAPPPET SHPRHANLRT ESQRPTSADS TSAQKSQTPT LTPKVDTSAS VPAGTRPTSQ 120 121 KPGSAYPPVH ASNIDVNANP VHPATGKPIL MTDMDADFPD DDKPWRRPGT DLTDYFNYGF 180 181 DEFTWASYVL KQQELRKEVG DQKRQLDDMQ NFLTMGLPPM PGAQPGAGPA AVSAPPPMPG 240 241 MPGIPDMNPD MMQGMLASMM SQGLDPSSMD PMSFMQHAQT MMGGQSGAGG GQQGQGGFGG 300 301 QGGGQSQMGY GNAGGGYGGG RGRGRRW 327 |
Nucleotide CDS Sequence (FASTA) |
1 ATGTCACACG CCATGGATGA CGACGATGAT GACCTCTATG ATCCCGCTGA TGCGGTGCCG 60 61 GTTACCAATC CTAGTGATCC TCGAGGGCCA TCAGCCGACG CTCCGATGAA CGACAATGTA 120 121 GAGGAGGAGG AAGAGGAGGT GGAGGAAGAC GACGAGGATG ACTTTAACAT CATCACAGAG 180 181 GCACCTCCGG ACGCGCCTCC TCCAGAAACT TCACATCCTC GACATGCTAA CTTACGAACC 240 241 GAGTCGCAAC GCCCTACATC CGCCGATTCC ACTTCAGCCC AGAAATCTCA GACGCCCACA 300 301 TTAACACCGA AGGTAGACAC GTCTGCCTCA GTGCCTGCCG GTACTAGACC TACATCACAA 360 361 AAACCAGGAT CCGCTTACCC TCCAGTGCAC GCGTCTAATA TTGACGTGAA CGCCAACCCG 420 421 GTTCACCCAG CTACCGGCAA GCCAATCTTG ATGACTGATA TGGATGCCGA TTTTCCCGAC 480 481 GATGATAAGC CATGGAGGCG GCCTGGCACG GACTTAACAG ATTACTTCAA CTACGGATTT 540 541 GACGAGTTTA CTTGGGCAAG TTATGTCTTG AAGCAACAAG AGTTACGAAA GGAAGTCGGA 600 601 GATCAGAAGA GGCAGCTGGA TGATATGCAG AACTTCCTGA CTATGGGGCT ACCCCCAATG 660 661 CCTGGCGCCC AACCCGGCGC TGGGCCAGCT GCGGTTAGCG CACCGCCTCC GATGCCTGGC 720 721 ATGCCGGGAA TACCAGATAT GAATCCGGAT ATGATGCAGG GGATGTTGGC ATCAATGATG 780 781 TCGCAAGGAT TAGACCCCTC ATCCATGGAT CCCATGTCTT TCATGCAGCA TGCCCAAACG 840 841 ATGATGGGTG GGCAATCCGG CGCAGGCGGC GGACAACAGG GCCAAGGGGG ATTCGGTGGC 900 901 CAAGGTGGTG GTCAAAGCCA GATGGGTTAT GGGAATGCTG GAGGTGGTTA TGGTGGAGGC 960 961 CGCGGGCGGG GGAGGAGATG GTAA 984 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | MRNA cleavage and polyadenylation specificity factor complex | |
Biological Process | Pre-mRNA cleavage required for polyadenylation |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Asc-0782 | Aspergillus clavatus | 79.8 | 1e-76 | 244 |
LLPS-Asni-0883 | Aspergillus niger | 78.47 | 4e-83 | 261 |
LLPS-Asf-0715 | Aspergillus flavus | 78.2 | 2e-83 | 262 |
LLPS-Nef-0913 | Neosartorya fischeri | 75.0 | 1e-75 | 242 |
LLPS-Asfu-0815 | Aspergillus fumigatus | 73.56 | 6e-76 | 243 |
LLPS-Scm-1405 | Scophthalmus maximus | 67.65 | 5e-09 | 61.6 |
LLPS-Lac-0519 | Latimeria chalumnae | 67.65 | 2e-09 | 62.8 |
LLPS-Dar-2878 | Danio rerio | 67.65 | 3e-09 | 62.0 |
LLPS-Orn-0257 | Oreochromis niloticus | 67.65 | 4e-09 | 61.6 |
LLPS-Ten-1537 | Tetraodon nigroviridis | 67.65 | 4e-09 | 62.0 |
LLPS-Leo-3932 | Lepisosteus oculatus | 67.65 | 5e-09 | 61.6 |
LLPS-Tar-3210 | Takifugu rubripes | 67.65 | 4e-09 | 61.6 |
LLPS-Xim-2589 | Xiphophorus maculatus | 67.65 | 4e-09 | 61.6 |
LLPS-Scf-2736 | Scleropages formosus | 67.65 | 6e-09 | 61.2 |
LLPS-Asg-0082 | Ashbya gossypii | 66.67 | 5e-10 | 63.9 |
LLPS-Scj-0849 | Schizosaccharomyces japonicus | 65.85 | 1e-12 | 71.6 |
LLPS-Mod-2480 | Monodelphis domestica | 64.71 | 8e-09 | 60.8 |
LLPS-Fec-2399 | Felis catus | 64.71 | 1e-08 | 60.5 |
LLPS-Meg-0728 | Meleagris gallopavo | 64.71 | 5e-09 | 61.2 |
LLPS-Hos-0667 | Homo sapiens | 64.71 | 1e-08 | 60.5 |
LLPS-Pap-1285 | Pan paniscus | 64.71 | 1e-08 | 60.5 |
LLPS-Urm-1378 | Ursus maritimus | 64.71 | 1e-08 | 60.5 |
LLPS-Pof-0926 | Poecilia formosa | 64.71 | 1e-08 | 60.5 |
LLPS-Pat-2384 | Pan troglodytes | 64.71 | 1e-08 | 60.5 |
LLPS-Loa-1430 | Loxodonta africana | 64.71 | 1e-08 | 60.5 |
LLPS-Anp-1362 | Anas platyrhynchos | 64.71 | 6e-09 | 61.2 |
LLPS-Man-1262 | Macaca nemestrina | 64.71 | 1e-08 | 60.5 |
LLPS-Otg-1245 | Otolemur garnettii | 64.71 | 1e-08 | 60.5 |
LLPS-Rhb-2162 | Rhinopithecus bieti | 64.71 | 1e-08 | 60.5 |
LLPS-Orc-2277 | Oryctolagus cuniculus | 64.71 | 1e-08 | 60.5 |
LLPS-Fia-2545 | Ficedula albicollis | 64.71 | 7e-09 | 60.8 |
LLPS-Cap-3889 | Cavia porcellus | 64.71 | 9e-09 | 60.8 |
LLPS-Eqc-2452 | Equus caballus | 64.71 | 1e-08 | 60.5 |
LLPS-Caf-0021 | Canis familiaris | 64.71 | 8e-09 | 60.8 |
LLPS-Poa-3825 | Pongo abelii | 64.71 | 1e-08 | 60.5 |
LLPS-Cas-1083 | Carlito syrichta | 64.71 | 9e-09 | 60.8 |
LLPS-Gaga-3099 | Gallus gallus | 64.71 | 6e-09 | 61.2 |
LLPS-Tag-2883 | Taeniopygia guttata | 64.71 | 7e-09 | 60.8 |
LLPS-Nol-1445 | Nomascus leucogenys | 64.71 | 1e-08 | 60.5 |
LLPS-Anc-2292 | Anolis carolinensis | 64.71 | 1e-08 | 60.5 |
LLPS-Ict-3778 | Ictidomys tridecemlineatus | 64.71 | 1e-08 | 60.5 |
LLPS-Chs-2001 | Chlorocebus sabaeus | 64.71 | 1e-08 | 60.5 |
LLPS-Mum-2597 | Mus musculus | 64.71 | 1e-08 | 60.5 |
LLPS-Maf-0258 | Macaca fascicularis | 64.71 | 1e-08 | 60.5 |
LLPS-Cii-1144 | Ciona intestinalis | 64.71 | 1e-08 | 60.5 |
LLPS-Mea-2599 | Mesocricetus auratus | 64.71 | 9e-09 | 60.8 |
LLPS-Sus-1663 | Sus scrofa | 64.71 | 1e-08 | 60.5 |
LLPS-Aon-2706 | Aotus nancymaae | 64.71 | 1e-08 | 60.5 |
LLPS-Cea-1022 | Cercocebus atys | 64.71 | 1e-08 | 60.5 |
LLPS-Cis-2058 | Ciona savignyi | 64.71 | 7e-10 | 60.8 |
LLPS-Sah-2731 | Sarcophilus harrisii | 64.71 | 1e-08 | 60.5 |
LLPS-Gog-3697 | Gorilla gorilla | 64.71 | 1e-08 | 60.5 |
LLPS-Caj-3092 | Callithrix jacchus | 64.71 | 1e-08 | 60.5 |
LLPS-Fud-3257 | Fukomys damarensis | 64.71 | 1e-08 | 60.5 |
LLPS-Bot-1538 | Bos taurus | 64.71 | 1e-08 | 60.5 |
LLPS-Dio-3781 | Dipodomys ordii | 64.71 | 1e-08 | 60.5 |
LLPS-Ran-0550 | Rattus norvegicus | 64.71 | 1e-08 | 60.5 |
LLPS-Myl-0289 | Myotis lucifugus | 64.71 | 9e-09 | 60.8 |
LLPS-Ova-0822 | Ovis aries | 64.71 | 9e-09 | 60.5 |
LLPS-Aim-3962 | Ailuropoda melanoleuca | 64.71 | 1e-08 | 60.5 |
LLPS-Mup-2013 | Mustela putorius furo | 64.71 | 1e-08 | 60.5 |
LLPS-Paa-0727 | Papio anubis | 64.71 | 1e-08 | 60.5 |
LLPS-Mal-0775 | Mandrillus leucophaeus | 64.71 | 1e-08 | 60.5 |
LLPS-Coo-1062 | Colletotrichum orbiculare | 63.08 | 1e-19 | 92.0 |
LLPS-Pes-0503 | Pelodiscus sinensis | 62.86 | 2e-07 | 56.2 |
LLPS-Ora-0634 | Ornithorhynchus anatinus | 62.86 | 2e-07 | 56.2 |
LLPS-Cogr-0192 | Colletotrichum graminicola | 62.12 | 2e-19 | 91.3 |
LLPS-Drm-1054 | Drosophila melanogaster | 61.76 | 3e-08 | 59.3 |
LLPS-Cae-0522 | Caenorhabditis elegans | 59.52 | 5e-09 | 61.6 |
LLPS-Gas-0015 | Galdieria sulphuraria | 58.82 | 3e-06 | 52.0 |
LLPS-Php-1190 | Physcomitrella patens | 56.76 | 3e-07 | 56.2 |
LLPS-Cym-0507 | Cyanidioschyzon merolae | 52.27 | 2e-07 | 56.2 |
LLPS-Scc-0708 | Schizosaccharomyces cryophilus | 50.0 | 8e-13 | 72.4 |
LLPS-Mao-1573 | Magnaporthe oryzae | 49.48 | 1e-19 | 91.3 |
LLPS-Yal-0295 | Yarrowia lipolytica | 48.44 | 4e-11 | 65.5 |
LLPS-Abg-1544 | Absidia glauca | 47.54 | 6e-10 | 63.5 |
LLPS-Fuo-0346 | Fusarium oxysporum | 45.74 | 1e-22 | 100 |
LLPS-Kop-0145 | Komagataella pastoris | 45.07 | 7e-11 | 66.2 |
LLPS-Fuv-0669 | Fusarium verticillioides | 44.96 | 3e-22 | 99.0 |
LLPS-Trv-1005 | Trichoderma virens | 44.88 | 2e-23 | 102 |
LLPS-Fus-0834 | Fusarium solani | 42.31 | 5e-21 | 95.5 |
LLPS-Xet-3085 | Xenopus tropicalis | 40.0 | 3e-10 | 65.1 |
LLPS-Scp-1091 | Schizosaccharomyces pombe | 39.81 | 2e-12 | 71.2 |
LLPS-Tum-0259 | Tuber melanosporum | 36.96 | 2e-15 | 79.0 |
LLPS-Asm-1016 | Astyanax mexicanus | 36.36 | 3e-09 | 62.4 |
LLPS-Orl-1082 | Oryzias latipes | 35.4 | 2e-09 | 62.4 |
LLPS-Gaa-0067 | Gasterosteus aculeatus | 34.48 | 4e-08 | 58.5 |
LLPS-Sac-1304 | Saccharomyces cerevisiae | 29.36 | 7e-10 | 63.5 |