LLPS-Art-2753
RPS17C
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | 40S ribosomal protein S17-3 |
Gene Name: | RPS17C, At3g10610, F13M14.10, F18K10.23 |
Ensembl Gene: | AT3G10610 |
Ensembl Protein: | AT3G10610.1 |
Organism: | Arabidopsis thaliana |
Taxa ID: | 3702 |
LLPS Type: | Regulator |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
P-body | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | AT3G10610.1 | AT3G10610.1 |
UniProt | Q9SQZ1, RS173_ARATH | |
GeneBank | AY088250, AY091313, AC013428, AY063881, CP002686, AC011560 | AAF76367.1, AAL36237.1, AAM14252.1, AAG51372.1, AAM65790.1, AEE74934.1 |
RefSeq | NM_111897.4 | NP_187672.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MGRVRTKTVK KSSRQVIEKY YSRMTLDFHT NKKILEEVAI IPSKRLRNKI AGFSTHLMKR 60 61 IQKGPVRGIS LKLQEEERER RMDFVPDESA IKIDDVKVDK ETLEMLASLG MSDIAGISQV 120 121 ETQQAMAPAV FGRPAGRYQR 140 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGGTCGTG TTCGTACCAA AACGGTTAAG AAGTCTTCAC GTCAGGTGAT TGAGAAGTAC 60 61 TACTCACGGA TGACACTAGA CTTCCACACC AACAAGAAGA TCTTGGAAGA AGTTGCAATC 120 121 ATCCCATCGA AAAGGCTACG CAACAAGATT GCTGGATTCT CCACTCACTT GATGAAACGT 180 181 ATCCAAAAGG GTCCAGTCCG TGGAATCTCC CTCAAGCTAC AAGAGGAAGA GCGTGAAAGG 240 241 CGAATGGACT TTGTTCCCGA TGAGTCAGCC ATTAAAATCG ATGATGTTAA GGTGGACAAA 300 301 GAGACACTAG AGATGCTTGC TTCTTTGGGA ATGTCTGATA TTGCTGGGAT TTCTCAAGTG 360 361 GAGACACAAC AAGCTATGGC ACCTGCTGTG TTTGGACGTC CCGCAGGAAG ATACCAACGC 420 421 TAA 423 |
▼ ANNOTATION
Disorder | ||||
IUPred2A |
PTM | ||||
EPSD |
Physicochemical | ||||
Compute pI/Mw | AAindex |
Function | ||||
PIRSF |
Localization | ||||
COMPARTMENTS |
Expression | ||||
ArrayExpress |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Brr-0363 | Brassica rapa | 91.04 | 1e-80 | 242 |
LLPS-Brn-1524 | Brassica napus | 90.58 | 3e-83 | 247 |
LLPS-Bro-0450 | Brassica oleracea | 90.58 | 3e-83 | 247 |
LLPS-Via-1497 | Vigna angularis | 89.38 | 2e-67 | 209 |
LLPS-Met-2212 | Medicago truncatula | 88.79 | 1e-69 | 213 |
LLPS-Mae-0458 | Manihot esculenta | 87.6 | 2e-71 | 218 |
LLPS-Cus-1900 | Cucumis sativus | 86.78 | 2e-71 | 218 |
LLPS-Sot-0800 | Solanum tuberosum | 86.72 | 1e-73 | 223 |
LLPS-Pot-2728 | Populus trichocarpa | 86.05 | 3e-74 | 224 |
LLPS-Nia-0854 | Nicotiana attenuata | 85.94 | 6e-73 | 221 |
LLPS-Sol-0427 | Solanum lycopersicum | 85.16 | 2e-72 | 220 |
LLPS-Dac-0108 | Daucus carota | 85.04 | 3e-72 | 219 |
LLPS-Arl-0610 | Arabidopsis lyrata | 84.67 | 6e-76 | 229 |
LLPS-Glm-2235 | Glycine max | 84.5 | 4e-72 | 219 |
LLPS-Phv-0433 | Phaseolus vulgaris | 82.64 | 3e-68 | 209 |
LLPS-Thc-1174 | Theobroma cacao | 82.31 | 4e-73 | 222 |
LLPS-Viv-0665 | Vitis vinifera | 80.45 | 4e-72 | 219 |
LLPS-Gor-1424 | Gossypium raimondii | 80.0 | 5e-71 | 216 |
LLPS-Sem-0149 | Selaginella moellendorffii | 79.83 | 6e-63 | 196 |
LLPS-Orbr-0263 | Oryza brachyantha | 79.49 | 4e-67 | 209 |
LLPS-Mua-0842 | Musa acuminata | 79.02 | 4e-74 | 224 |
LLPS-Prp-1068 | Prunus persica | 78.83 | 2e-73 | 223 |
LLPS-Orb-0341 | Oryza barthii | 77.27 | 1e-72 | 221 |
LLPS-Vir-0732 | Vigna radiata | 76.92 | 5e-59 | 185 |
LLPS-Hea-0202 | Helianthus annuus | 76.76 | 6e-72 | 219 |
LLPS-Sob-0600 | Sorghum bicolor | 76.47 | 1e-70 | 215 |
LLPS-Amt-0804 | Amborella trichopoda | 76.26 | 2e-70 | 215 |
LLPS-Sei-2148 | Setaria italica | 76.12 | 4e-72 | 219 |
LLPS-Orp-0220 | Oryza punctata | 76.12 | 1e-71 | 218 |
LLPS-Lep-0860 | Leersia perrieri | 74.63 | 3e-70 | 214 |
LLPS-Orgl-1247 | Oryza glumaepatula | 74.63 | 9e-71 | 216 |
LLPS-Ori-1045 | Oryza indica | 74.63 | 9e-71 | 216 |
LLPS-Orni-0969 | Oryza nivara | 74.63 | 9e-71 | 216 |
LLPS-Orr-1109 | Oryza rufipogon | 74.63 | 9e-71 | 216 |
LLPS-Orm-1143 | Oryza meridionalis | 74.63 | 9e-71 | 216 |
LLPS-Org-0253 | Oryza glaberrima | 74.63 | 9e-71 | 216 |
LLPS-Ors-1825 | Oryza sativa | 74.63 | 9e-71 | 216 |
LLPS-Brd-1638 | Brachypodium distachyon | 74.44 | 6e-71 | 216 |
LLPS-Zem-1673 | Zea mays | 73.88 | 6e-70 | 214 |
LLPS-Osl-0421 | Ostreococcus lucimarinus | 73.73 | 2e-61 | 192 |
LLPS-Hov-0656 | Hordeum vulgare | 73.13 | 1e-66 | 207 |
LLPS-Tra-1765 | Triticum aestivum | 72.66 | 3e-68 | 209 |
LLPS-Chc-0563 | Chondrus crispus | 72.36 | 6e-59 | 186 |
LLPS-Php-0157 | Physcomitrella patens | 72.14 | 6e-64 | 199 |
LLPS-Tru-1077 | Triticum urartu | 71.94 | 2e-67 | 207 |
LLPS-Gas-0331 | Galdieria sulphuraria | 69.4 | 2e-57 | 181 |
LLPS-Mal-3229 | Mandrillus leucophaeus | 68.81 | 2e-48 | 159 |
LLPS-Aon-3636 | Aotus nancymaae | 68.81 | 2e-48 | 159 |
LLPS-Eqc-1637 | Equus caballus | 68.81 | 3e-48 | 158 |
LLPS-Hos-3572 | Homo sapiens | 68.81 | 2e-48 | 159 |
LLPS-Scj-0617 | Schizosaccharomyces japonicus | 67.54 | 2e-50 | 164 |
LLPS-Cym-0407 | Cyanidioschyzon merolae | 67.21 | 4e-55 | 176 |
LLPS-Crn-1249 | Cryptococcus neoformans | 66.95 | 1e-50 | 165 |
LLPS-Abg-0955 | Absidia glauca | 66.67 | 3e-51 | 166 |
LLPS-Put-0978 | Puccinia triticina | 66.38 | 1e-47 | 157 |
LLPS-Pug-0486 | Puccinia graminis | 66.38 | 5e-48 | 158 |
LLPS-Scp-0447 | Schizosaccharomyces pombe | 65.81 | 1e-49 | 161 |
LLPS-Cii-1066 | Ciona intestinalis | 65.57 | 4e-52 | 168 |
LLPS-Miv-0646 | Microbotryum violaceum | 64.29 | 3e-52 | 169 |
LLPS-Caf-1379 | Canis familiaris | 64.17 | 7e-49 | 161 |
LLPS-Drm-1162 | Drosophila melanogaster | 64.1 | 6e-47 | 155 |
LLPS-Scc-0906 | Schizosaccharomyces cryophilus | 64.1 | 4e-48 | 157 |
LLPS-Icp-1556 | Ictalurus punctatus | 63.57 | 8e-48 | 157 |
LLPS-Chr-0237 | Chlamydomonas reinhardtii | 63.31 | 3e-59 | 186 |
LLPS-Asm-1179 | Astyanax mexicanus | 63.25 | 2e-47 | 156 |
LLPS-Mea-4252 | Mesocricetus auratus | 62.64 | 4e-35 | 124 |
LLPS-Cae-0304 | Caenorhabditis elegans | 61.74 | 8e-44 | 147 |
LLPS-Zyt-0765 | Zymoseptoria tritici | 61.67 | 2e-45 | 151 |
LLPS-Dos-0498 | Dothistroma septosporum | 61.67 | 1e-45 | 152 |
LLPS-Ten-3505 | Tetraodon nigroviridis | 61.19 | 8e-51 | 164 |
LLPS-Trv-0238 | Trichoderma virens | 61.07 | 1e-48 | 159 |
LLPS-Trr-0594 | Trichoderma reesei | 61.07 | 5e-48 | 158 |
LLPS-Yal-0706 | Yarrowia lipolytica | 61.02 | 7e-47 | 155 |
LLPS-Mup-2726 | Mustela putorius furo | 60.48 | 3e-38 | 132 |
LLPS-Tar-3397 | Takifugu rubripes | 60.45 | 2e-49 | 161 |
LLPS-Rhb-0322 | Rhinopithecus bieti | 60.31 | 1e-48 | 160 |
LLPS-Gaa-2916 | Gasterosteus aculeatus | 60.29 | 5e-50 | 163 |
LLPS-Dar-0053 | Danio rerio | 60.29 | 5e-50 | 162 |
LLPS-Ran-2634 | Rattus norvegicus | 59.7 | 1e-49 | 162 |
LLPS-Asfu-0751 | Aspergillus fumigatus | 59.66 | 7e-45 | 152 |
LLPS-Bot-0217 | Bos taurus | 59.56 | 1e-49 | 164 |
LLPS-Scf-1130 | Scleropages formosus | 59.56 | 2e-50 | 164 |
LLPS-Xim-1907 | Xiphophorus maculatus | 59.56 | 2e-50 | 164 |
LLPS-Tut-0729 | Tursiops truncatus | 59.56 | 2e-50 | 164 |
LLPS-Paa-3148 | Papio anubis | 59.56 | 2e-50 | 164 |
LLPS-Ova-0344 | Ovis aries | 59.56 | 2e-50 | 164 |
LLPS-Orl-1958 | Oryzias latipes | 59.56 | 9e-51 | 164 |
LLPS-Cea-1622 | Cercocebus atys | 59.56 | 2e-50 | 164 |
LLPS-Sus-2204 | Sus scrofa | 59.56 | 2e-50 | 164 |
LLPS-Leo-0109 | Lepisosteus oculatus | 59.56 | 2e-50 | 164 |
LLPS-Mum-1634 | Mus musculus | 59.56 | 2e-50 | 164 |
LLPS-Maf-0129 | Macaca fascicularis | 59.56 | 2e-50 | 164 |
LLPS-Ora-0204 | Ornithorhynchus anatinus | 59.56 | 2e-50 | 164 |
LLPS-Fud-1189 | Fukomys damarensis | 59.56 | 2e-50 | 164 |
LLPS-Caj-2267 | Callithrix jacchus | 59.56 | 2e-50 | 164 |
LLPS-Mam-1213 | Macaca mulatta | 59.56 | 2e-50 | 164 |
LLPS-Poa-3043 | Pongo abelii | 59.56 | 2e-50 | 164 |
LLPS-Cap-1170 | Cavia porcellus | 59.56 | 2e-50 | 164 |
LLPS-Ict-0298 | Ictidomys tridecemlineatus | 59.56 | 2e-50 | 164 |
LLPS-Cas-1124 | Carlito syrichta | 59.56 | 2e-50 | 164 |
LLPS-Gaga-1500 | Gallus gallus | 59.56 | 2e-50 | 164 |
LLPS-Man-1066 | Macaca nemestrina | 59.56 | 2e-50 | 164 |
LLPS-Pof-0283 | Poecilia formosa | 59.56 | 2e-50 | 165 |
LLPS-Fec-0362 | Felis catus | 59.56 | 2e-50 | 164 |
LLPS-Mod-2120 | Monodelphis domestica | 59.56 | 2e-50 | 164 |
LLPS-Orc-1432 | Oryctolagus cuniculus | 59.56 | 2e-50 | 164 |
LLPS-Orn-1126 | Oreochromis niloticus | 59.56 | 9e-51 | 164 |
LLPS-Otg-0825 | Otolemur garnettii | 59.56 | 2e-50 | 164 |
LLPS-Aim-0883 | Ailuropoda melanoleuca | 59.26 | 1e-49 | 163 |
LLPS-Anc-0592 | Anolis carolinensis | 59.26 | 1e-49 | 162 |
LLPS-Xet-0064 | Xenopus tropicalis | 59.26 | 1e-49 | 162 |
LLPS-Loa-2889 | Loxodonta africana | 59.26 | 2e-49 | 162 |
LLPS-Scm-0743 | Scophthalmus maximus | 59.26 | 4e-49 | 162 |
LLPS-Fia-0548 | Ficedula albicollis | 59.26 | 1e-49 | 162 |
LLPS-Pes-0905 | Pelodiscus sinensis | 59.26 | 1e-49 | 162 |
LLPS-Mel-0045 | Melampsora laricipopulina | 58.91 | 8e-47 | 155 |
LLPS-Asc-0373 | Aspergillus clavatus | 58.82 | 1e-44 | 149 |
LLPS-Lac-1588 | Latimeria chalumnae | 58.82 | 7e-50 | 163 |
LLPS-Nef-0740 | Neosartorya fischeri | 58.82 | 1e-44 | 149 |
LLPS-Asni-0072 | Aspergillus niger | 58.78 | 1e-46 | 154 |
LLPS-Beb-0117 | Beauveria bassiana | 58.65 | 2e-46 | 154 |
LLPS-Blg-0778 | Blumeria graminis | 58.33 | 1e-47 | 157 |
LLPS-Chs-1305 | Chlorocebus sabaeus | 58.09 | 1e-48 | 159 |
LLPS-Gog-3296 | Gorilla gorilla | 58.09 | 2e-43 | 145 |
LLPS-Pap-0245 | Pan paniscus | 58.09 | 3e-48 | 158 |
LLPS-Pat-0617 | Pan troglodytes | 58.09 | 3e-48 | 158 |
LLPS-Aso-1162 | Aspergillus oryzae | 57.58 | 2e-45 | 151 |
LLPS-Asf-1065 | Aspergillus flavus | 57.58 | 2e-45 | 151 |
LLPS-Asg-0293 | Ashbya gossypii | 57.48 | 1e-45 | 151 |
LLPS-Nol-1516 | Nomascus leucogenys | 57.35 | 7e-48 | 157 |
LLPS-Map-0868 | Magnaporthe poae | 57.25 | 5e-45 | 150 |
LLPS-Scs-0786 | Sclerotinia sclerotiorum | 57.14 | 8e-49 | 160 |
LLPS-Ved-0352 | Verticillium dahliae | 57.04 | 1e-46 | 155 |
LLPS-Phn-1061 | Phaeosphaeria nodorum | 56.94 | 3e-46 | 153 |
LLPS-Asn-0702 | Aspergillus nidulans | 56.93 | 8e-48 | 157 |
LLPS-Spr-0050 | Sporisorium reilianum | 56.93 | 9e-46 | 152 |
LLPS-Usm-0077 | Ustilago maydis | 56.93 | 9e-46 | 152 |
LLPS-Ast-0245 | Aspergillus terreus | 56.92 | 8e-45 | 149 |
LLPS-Tum-0772 | Tuber melanosporum | 56.85 | 3e-45 | 151 |
LLPS-Gag-0277 | Gaeumannomyces graminis | 56.39 | 5e-45 | 150 |
LLPS-Nec-0177 | Neurospora crassa | 56.34 | 6e-45 | 150 |
LLPS-Sac-1257 | Saccharomyces cerevisiae | 56.25 | 1e-44 | 149 |
LLPS-Mao-0155 | Magnaporthe oryzae | 56.03 | 3e-46 | 153 |
LLPS-Lem-0911 | Leptosphaeria maculans | 55.94 | 2e-46 | 154 |
LLPS-Tag-2106 | Taeniopygia guttata | 55.74 | 1e-37 | 130 |
LLPS-Kop-0082 | Komagataella pastoris | 55.64 | 1e-42 | 144 |
LLPS-Fuv-0827 | Fusarium verticillioides | 55.63 | 1e-45 | 152 |
LLPS-Fuo-0900 | Fusarium oxysporum | 55.63 | 1e-45 | 152 |
LLPS-Meg-0503 | Meleagris gallopavo | 55.34 | 2e-30 | 112 |
LLPS-Fus-0420 | Fusarium solani | 55.24 | 2e-45 | 151 |
LLPS-Pyt-1490 | Pyrenophora teres | 54.79 | 1e-45 | 152 |
LLPS-Pytr-0328 | Pyrenophora triticirepentis | 54.79 | 1e-45 | 152 |
LLPS-Sah-0313 | Sarcophilus harrisii | 54.39 | 6e-35 | 123 |
LLPS-Coo-0951 | Colletotrichum orbiculare | 53.74 | 2e-44 | 149 |
LLPS-Cogr-0740 | Colletotrichum graminicola | 53.06 | 8e-45 | 150 |
LLPS-Cog-1061 | Colletotrichum gloeosporioides | 53.06 | 2e-44 | 149 |
LLPS-Anp-0620 | Anas platyrhynchos | 52.46 | 2e-36 | 127 |
LLPS-Dio-2821 | Dipodomys ordii | 50.0 | 1e-18 | 80.1 |
LLPS-Myl-0700 | Myotis lucifugus | 50.0 | 1e-18 | 80.1 |
LLPS-Urm-2046 | Ursus maritimus | 49.37 | 2e-15 | 71.6 |