LLPS-Art-1999
At1g26690
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Transmembrane emp24 domain-containing protein p24delta9; p24 family protein delta2c; p24delta2c; p24 family protein delta9; p24delta9 |
| Gene Name: | At1g26690, T24P13.7 |
| Ensembl Gene: | AT1G26690 |
| Ensembl Protein: | AT1G26690.1 |
| Organism: | Arabidopsis thaliana |
| Taxa ID: | 3702 |
| LLPS Type: | LLPS regulator |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| P-body, Stress granule | Predicted from orthologs | (View) |
▼ FUNCTION
| Involved in vesicular protein trafficking. Mainly functions in the early secretory pathway. Thought to act as cargo receptor at the lumenal side for incorporation of secretory cargo molecules into transport vesicles and to be involved in vesicle coat formation at the cytoplasmic side (By similarity). |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | AT1G26690.1 | AT1G26690.1 |
| UniProt | Q9LQY3, P24D9_ARATH, Q8GWZ7, Q8LFL9 | |
| GeneBank | AK118529, AY084765, CP002684, AC006535, BT003733 | BAC43132.1, AAO39961.1, AAM67291.1, AAF87046.1, AEE30721.1 |
| RefSeq | NM_102432.3 | NP_564256.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MFLRSLNLCT ILLFLAISSQ VSQSLHFELQ SGRTKCISED IKSNSMTVGK YTVVNPNEAH 60 61 PSPQSHKISI RVTSSYGNTY HHAEDVESGQ FAFTAVESGD YMACYTAVDH KPEVTLSIDF 120 121 DWRTGVQSKS WSSVAKKSQV EVMEFDVKRL IETVNSIHEE MFYLREREEE MQNLNRATNS 180 181 KMAWLSFLSL FVCLGVAGMQ FVHLKTFFEK KKVI 214 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGTTTCTCC GATCACTCAA TCTCTGTACA ATACTACTCT TCCTAGCGAT TTCATCACAA 60 61 GTTTCTCAAT CTCTCCACTT CGAATTGCAA TCTGGTCGAA CAAAATGTAT ATCGGAAGAC 120 121 ATAAAAAGCA ATTCAATGAC CGTCGGGAAG TACACCGTCG TTAACCCTAA CGAAGCTCAT 180 181 CCTTCTCCTC AATCTCACAA GATCTCCATC AGAGTGACAT CGAGTTACGG GAACACGTAT 240 241 CATCACGCGG AAGATGTAGA ATCGGGACAA TTCGCGTTCA CGGCGGTGGA GTCTGGAGAT 300 301 TACATGGCTT GTTACACAGC TGTTGATCAT AAACCTGAGG TTACATTGAG TATTGATTTC 360 361 GATTGGAGAA CTGGTGTTCA ATCTAAAAGC TGGAGTAGTG TTGCTAAGAA GAGCCAAGTC 420 421 GAAGTTATGG AGTTTGATGT AAAAAGACTT ATTGAAACCG TCAATTCGAT TCATGAAGAG 480 481 ATGTTTTATC TCAGAGAAAG GGAAGAAGAG ATGCAGAATC TGAACCGGGC TACTAACTCG 540 541 AAAATGGCGT GGTTGAGTTT CCTCTCTCTT TTCGTATGCT TAGGAGTCGC GGGAATGCAG 600 601 TTTGTGCATT TGAAGACGTT TTTCGAGAAG AAGAAAGTCA TCTAA 645 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | COPII-coated ER to Golgi transport vesicle | |
Cellular Component | Endoplasmic reticulum | |
Cellular Component | Endoplasmic reticulum membrane | |
Cellular Component | Endoplasmic reticulum-Golgi intermediate compartment | |
Cellular Component | Endoplasmic reticulum-Golgi intermediate compartment membrane | |
Cellular Component | Golgi apparatus | |
Cellular Component | Golgi cisterna membrane | |
Cellular Component | Integral component of membrane | |
Biological Process | Endoplasmic reticulum to Golgi vesicle-mediated transport | |
Biological Process | Golgi organization | |
Biological Process | Intracellular protein transport |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Arl-2215 | Arabidopsis lyrata | 95.79 | 5e-140 | 397 |
| LLPS-Brn-1279 | Brassica napus | 87.38 | 5e-126 | 362 |
| LLPS-Brr-1858 | Brassica rapa | 86.92 | 2e-125 | 360 |
| LLPS-Bro-2493 | Brassica oleracea | 86.92 | 4e-125 | 360 |
| LLPS-Thc-2270 | Theobroma cacao | 63.46 | 2e-87 | 264 |
| LLPS-Sac-0663 | Saccharomyces cerevisiae | 27.88 | 4e-14 | 72.0 |
| LLPS-Ast-1402 | Aspergillus terreus | 27.8 | 8e-11 | 62.8 |
| LLPS-Nef-1500 | Neosartorya fischeri | 25.89 | 6e-09 | 57.8 |
| LLPS-Asfu-1067 | Aspergillus fumigatus | 25.0 | 2e-08 | 56.6 |
| LLPS-Kop-0275 | Komagataella pastoris | 24.38 | 7e-09 | 57.8 |
| LLPS-Orc-2970 | Oryctolagus cuniculus | 23.77 | 1e-11 | 65.5 |