LLPS-Art-1939
At2g03640
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein |
Gene Name: | At2g03640, F19B11.9, F19B11_9 |
Ensembl Gene: | AT2G03640 |
Ensembl Protein: | AT2G03640.3 |
Organism: | Arabidopsis thaliana |
Taxa ID: | 3702 |
LLPS Type: | LLPS regulator |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
P-body, Stress granule, Others | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | AT2G03640.3 | AT2G03640.3 |
Ensembl | AT2G03640.1 | AT2G03640.1 |
Ensembl | AT2G03640.5 | AT2G03640.5 |
Ensembl | AT2G03640.2 | AT2G03640.2 |
Ensembl | AT2G03640.4 | AT2G03640.4 |
UniProt | F4IT98, F4IT98_ARATH | |
GeneBank | CP002685 | AEC05731.1 |
RefSeq | NM_001202578.1 | NP_001189507.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MTPESNAPSV DPQFVGNGFV QEYYNHLYDS TSEVHKFYLE DSMISRPGLD GEIVTIKSLK 60 61 GINDQIMSID YKSSRIEILT ADSQSTLKNG VVTLVTGLVI GNDGGRRKFS QSFFLVSRNG 120 121 SYFVLNDTFR YVSDEFVEPE ATKEVEESQS TNAITEPANE SVEAVIVPTE AKTTVTKPAS 180 181 AIPNGHAKVP EEKVVNENSS LPKAAEAKLQ EEVPKKSFAL IVQSLAQSAG TLQVKASPVK 240 241 RKPVEKPVAA PERKAPSPIR KQASAESIKP QAQGSSIFVA NLPMDATIEQ LYETFKSFGA 300 301 IRKDGIQVRS YPEKKNCIGF VAFENGEAVK NVFQAHRESP IRIGNRRASI EEKRGKFLKG 360 361 IVVSKIVTLI KCKNKILILL FLDYAGGNNQ NGNRVSTRNN SGYKNEDGFR RDGYKPRGSG 420 421 VNGGRGYGRR NSESNGDGKA YQNNGHGNTE AKN 453 |
Nucleotide CDS Sequence (FASTA) |
1 ATGACACCTG AATCAAACGC TCCCTCAGTA GATCCACAAT TTGTAGGCAA TGGGTTTGTT 60 61 CAAGAATACT ATAACCACCT TTATGATTCA ACCTCGGAAG TACACAAATT CTATCTCGAG 120 121 GATAGTATGA TTTCACGGCC TGGTCTCGAT GGTGAGATAG TTACTATCAA ATCCTTGAAA 180 181 GGGATTAATG ATCAGATAAT GTCCATTGAC TACAAAAGCT CAAGGATCGA GATTCTAACT 240 241 GCTGATTCTC AATCAACTTT AAAGAATGGT GTTGTAACTC TAGTCACGGG TTTAGTGATC 300 301 GGGAACGATG GAGGAAGGAG GAAATTTTCT CAGAGTTTCT TTCTTGTGTC GCGGAATGGA 360 361 AGCTACTTTG TGCTGAATGA TACCTTTAGG TATGTGTCTG ATGAGTTTGT TGAACCAGAA 420 421 GCTACCAAGG AGGTTGAGGA GAGTCAGTCA ACAAATGCTA TCACTGAGCC TGCAAATGAA 480 481 AGTGTAGAGG CGGTTATTGT CCCTACTGAA GCTAAAACTA CGGTGACGAA GCCAGCAAGT 540 541 GCCATACCAA ACGGACATGC GAAAGTCCCT GAGGAGAAAG TTGTGAATGA AAACAGTAGC 600 601 TTACCTAAAG CTGCTGAAGC AAAACTTCAA GAGGAGGTTC CCAAGAAATC GTTTGCATTA 660 661 ATTGTTCAAT CTCTGGCTCA AAGCGCTGGT ACTTTACAGG TTAAAGCCTC GCCGGTCAAG 720 721 CGTAAACCTG TCGAAAAACC GGTTGCTGCT CCGGAGCGCA AAGCTCCTTC CCCAATTCGT 780 781 AAACAGGCTT CTGCTGAAAG CATTAAACCA CAAGCTCAGG GTAGTTCCAT ATTTGTTGCA 840 841 AACTTGCCTA TGGATGCGAC TATTGAGCAA CTTTATGAAA CATTTAAAAG TTTTGGAGCT 900 901 ATTAGAAAGG ATGGTATCCA AGTCAGAAGT TACCCGGAAA AAAAGAACTG TATTGGGTTT 960 961 GTGGCATTCG AAAATGGTGA AGCAGTAAAA AATGTCTTTC AGGCTCACAG GGAATCACCA 1020 1021 ATCAGAATCG GAAACCGAAG AGCATCTATA GAAGAAAAGC GAGGCAAGTT TCTGAAAGGC 1080 1081 ATTGTTGTCT CAAAGATTGT AACTTTAATT AAATGTAAAA ACAAAATCCT AATCTTACTT 1140 1141 TTTCTGGATT ATGCAGGAGG TAACAATCAA AATGGCAACA GAGTCTCTAC AAGAAACAAC 1200 1201 AGTGGTTATA AAAATGAGGA TGGTTTCAGA CGTGATGGAT ACAAACCTAG GGGCAGTGGC 1260 1261 GTCAATGGAG GACGAGGCTA TGGGAGACGG AACAGTGAGT CTAATGGGGA TGGTAAAGCA 1320 1321 TACCAGAACA ATGGCCATGG CAATACTGAG GCCAAAAACT AG 1362 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Arl-0778 | Arabidopsis lyrata | 55.32 | 4e-134 | 401 |
LLPS-Orm-1736 | Oryza meridionalis | 43.96 | 5e-15 | 81.3 |
LLPS-Ori-0992 | Oryza indica | 43.96 | 5e-15 | 81.3 |
LLPS-Brd-1592 | Brachypodium distachyon | 42.52 | 4e-17 | 88.2 |
LLPS-Thc-0028 | Theobroma cacao | 41.76 | 4e-72 | 243 |
LLPS-Sem-1968 | Selaginella moellendorffii | 41.75 | 4e-14 | 73.6 |
LLPS-Via-0086 | Vigna angularis | 41.5 | 1e-68 | 232 |
LLPS-Gor-2003 | Gossypium raimondii | 41.49 | 2e-76 | 253 |
LLPS-Sot-0535 | Solanum tuberosum | 41.43 | 6e-21 | 95.9 |
LLPS-Viv-0823 | Vitis vinifera | 40.98 | 7e-18 | 87.4 |
LLPS-Phv-0687 | Phaseolus vulgaris | 40.86 | 2e-73 | 244 |
LLPS-Glm-0298 | Glycine max | 40.8 | 4e-67 | 226 |
LLPS-Vir-1350 | Vigna radiata | 40.39 | 3e-66 | 226 |
LLPS-Mae-0442 | Manihot esculenta | 40.1 | 1e-66 | 227 |
LLPS-Hov-1474 | Hordeum vulgare | 39.85 | 3e-18 | 88.6 |
LLPS-Lep-0161 | Leersia perrieri | 38.72 | 3e-51 | 186 |
LLPS-Amt-0147 | Amborella trichopoda | 38.5 | 2e-57 | 203 |
LLPS-Met-0201 | Medicago truncatula | 37.98 | 1e-60 | 211 |
LLPS-Abg-0597 | Absidia glauca | 37.9 | 5e-13 | 75.1 |
LLPS-Coc-0234 | Corchorus capsularis | 37.5 | 4e-59 | 206 |
LLPS-Mua-0084 | Musa acuminata | 37.27 | 8e-51 | 182 |
LLPS-Hea-1049 | Helianthus annuus | 36.98 | 3e-50 | 184 |
LLPS-Cus-0287 | Cucumis sativus | 36.18 | 8e-53 | 190 |
LLPS-Pot-2153 | Populus trichocarpa | 36.13 | 2e-59 | 207 |
LLPS-Crn-0619 | Cryptococcus neoformans | 36.0 | 8e-18 | 89.7 |
LLPS-Orbr-1818 | Oryza brachyantha | 35.95 | 2e-46 | 172 |
LLPS-Nia-0213 | Nicotiana attenuata | 35.88 | 4e-47 | 174 |
LLPS-Sol-0347 | Solanum lycopersicum | 35.86 | 8e-50 | 182 |
LLPS-Prp-1294 | Prunus persica | 35.37 | 2e-46 | 172 |
LLPS-Zem-0237 | Zea mays | 35.1 | 1e-44 | 168 |
LLPS-Org-2257 | Oryza glaberrima | 34.65 | 1e-41 | 159 |
LLPS-Orgl-0549 | Oryza glumaepatula | 34.65 | 2e-42 | 162 |
LLPS-Brr-0241 | Brassica rapa | 34.58 | 1e-40 | 156 |
LLPS-Brn-1844 | Brassica napus | 34.58 | 1e-40 | 156 |
LLPS-Ors-0333 | Oryza sativa | 34.47 | 3e-42 | 161 |
LLPS-Orr-1686 | Oryza rufipogon | 34.47 | 3e-42 | 161 |
LLPS-Dac-0651 | Daucus carota | 34.46 | 9e-45 | 167 |
LLPS-Bro-0356 | Brassica oleracea | 34.44 | 6e-44 | 166 |
LLPS-Sei-0543 | Setaria italica | 34.44 | 5e-49 | 182 |
LLPS-Orp-0830 | Oryza punctata | 34.42 | 6e-43 | 163 |
LLPS-Tum-0382 | Tuber melanosporum | 34.38 | 1e-11 | 70.5 |
LLPS-Ast-0772 | Aspergillus terreus | 34.29 | 8e-14 | 77.4 |
LLPS-Asni-0500 | Aspergillus niger | 34.04 | 3e-13 | 75.9 |
LLPS-Sob-0556 | Sorghum bicolor | 34.01 | 1e-43 | 165 |
LLPS-Usm-0768 | Ustilago maydis | 33.6 | 7e-13 | 74.7 |
LLPS-Xet-2055 | Xenopus tropicalis | 33.59 | 4e-09 | 62.8 |
LLPS-Tra-1592 | Triticum aestivum | 33.59 | 4e-42 | 160 |
LLPS-Trv-1304 | Trichoderma virens | 33.33 | 8e-12 | 71.2 |
LLPS-Scs-0924 | Sclerotinia sclerotiorum | 33.33 | 4e-11 | 68.9 |
LLPS-Asf-0508 | Aspergillus flavus | 33.33 | 7e-12 | 71.6 |
LLPS-Aso-1009 | Aspergillus oryzae | 33.33 | 7e-12 | 71.6 |
LLPS-Orb-1725 | Oryza barthii | 33.02 | 2e-43 | 164 |
LLPS-Php-1590 | Physcomitrella patens | 32.99 | 2e-35 | 141 |
LLPS-Tru-0544 | Triticum urartu | 32.84 | 2e-42 | 163 |
LLPS-Scm-0186 | Scophthalmus maximus | 32.82 | 1e-09 | 64.7 |
LLPS-Anc-2217 | Anolis carolinensis | 32.82 | 3e-09 | 63.2 |
LLPS-Spr-0523 | Sporisorium reilianum | 32.8 | 1e-12 | 73.9 |
LLPS-Map-0451 | Magnaporthe poae | 32.79 | 2e-10 | 67.0 |
LLPS-Trr-0431 | Trichoderma reesei | 32.52 | 7e-11 | 68.2 |
LLPS-Fus-0501 | Fusarium solani | 32.52 | 1e-11 | 70.9 |
LLPS-Mao-0426 | Magnaporthe oryzae | 32.5 | 8e-09 | 62.0 |
LLPS-Lem-0203 | Leptosphaeria maculans | 32.48 | 7e-11 | 68.2 |
LLPS-Asc-0920 | Aspergillus clavatus | 32.39 | 5e-11 | 68.9 |
LLPS-Nef-1421 | Neosartorya fischeri | 32.23 | 1e-11 | 70.9 |
LLPS-Drm-0009 | Drosophila melanogaster | 32.17 | 4e-10 | 65.9 |
LLPS-Ten-0970 | Tetraodon nigroviridis | 32.06 | 2e-09 | 63.9 |
LLPS-Asfu-1059 | Aspergillus fumigatus | 32.0 | 1e-11 | 70.5 |
LLPS-Coo-1257 | Colletotrichum orbiculare | 31.97 | 3e-12 | 72.4 |
LLPS-Gag-0034 | Gaeumannomyces graminis | 31.97 | 7e-10 | 65.1 |
LLPS-Mel-0279 | Melampsora laricipopulina | 31.82 | 2e-12 | 73.6 |
LLPS-Miv-0080 | Microbotryum violaceum | 31.75 | 9e-12 | 71.2 |
LLPS-Asn-0000 | Aspergillus nidulans | 31.69 | 2e-11 | 70.1 |
LLPS-Dos-0147 | Dothistroma septosporum | 31.5 | 1e-10 | 67.8 |
LLPS-Orni-0763 | Oryza nivara | 31.49 | 2e-39 | 154 |
LLPS-Put-0016 | Puccinia triticina | 31.36 | 3e-11 | 69.3 |
LLPS-Cog-0139 | Colletotrichum gloeosporioides | 31.09 | 1e-10 | 67.0 |
LLPS-Fuo-0198 | Fusarium oxysporum | 31.01 | 7e-10 | 65.1 |
LLPS-Zyt-0484 | Zymoseptoria tritici | 30.43 | 2e-11 | 68.9 |
LLPS-Orl-0003 | Oryzias latipes | 30.19 | 4e-10 | 65.5 |
LLPS-Nec-1393 | Neurospora crassa | 30.08 | 1e-09 | 64.7 |
LLPS-Beb-0276 | Beauveria bassiana | 29.95 | 1e-10 | 67.4 |
LLPS-Gaa-0163 | Gasterosteus aculeatus | 28.99 | 4e-09 | 62.8 |
LLPS-Cogr-1049 | Colletotrichum graminicola | 28.7 | 2e-12 | 73.2 |
LLPS-Fuv-0048 | Fusarium verticillioides | 27.71 | 4e-10 | 65.9 |
LLPS-Pytr-0021 | Pyrenophora triticirepentis | 27.32 | 4e-11 | 68.9 |
LLPS-Aon-1125 | Aotus nancymaae | 26.99 | 2e-13 | 75.9 |
LLPS-Mod-0112 | Monodelphis domestica | 26.7 | 7e-14 | 77.8 |
LLPS-Caf-3516 | Canis familiaris | 26.7 | 3e-13 | 75.9 |
LLPS-Fud-1603 | Fukomys damarensis | 26.7 | 9e-14 | 77.4 |
LLPS-Tut-1340 | Tursiops truncatus | 26.7 | 4e-14 | 78.6 |
LLPS-Sah-1211 | Sarcophilus harrisii | 26.46 | 2e-12 | 73.2 |
LLPS-Mup-1775 | Mustela putorius furo | 26.46 | 3e-12 | 72.4 |
LLPS-Pyt-1137 | Pyrenophora teres | 26.39 | 3e-11 | 67.4 |
LLPS-Man-1156 | Macaca nemestrina | 26.34 | 4e-12 | 72.0 |
LLPS-Cas-0577 | Carlito syrichta | 26.34 | 9e-13 | 74.3 |
LLPS-Eqc-0111 | Equus caballus | 26.34 | 4e-13 | 75.1 |
LLPS-Ova-1235 | Ovis aries | 26.34 | 4e-13 | 75.5 |
LLPS-Bot-1295 | Bos taurus | 26.34 | 4e-13 | 75.1 |
LLPS-Sus-1545 | Sus scrofa | 26.16 | 9e-13 | 73.9 |
LLPS-Rhb-1270 | Rhinopithecus bieti | 26.1 | 1e-12 | 73.9 |
LLPS-Orc-1231 | Oryctolagus cuniculus | 26.1 | 8e-13 | 74.3 |
LLPS-Fec-0958 | Felis catus | 26.1 | 2e-12 | 73.2 |
LLPS-Hos-0367 | Homo sapiens | 26.1 | 8e-13 | 74.3 |
LLPS-Pat-2542 | Pan troglodytes | 26.1 | 8e-13 | 74.3 |
LLPS-Pap-0818 | Pan paniscus | 26.1 | 8e-13 | 74.3 |
LLPS-Urm-0216 | Ursus maritimus | 26.1 | 2e-12 | 72.8 |
LLPS-Loa-2171 | Loxodonta africana | 26.1 | 1e-12 | 73.6 |
LLPS-Nol-0049 | Nomascus leucogenys | 26.1 | 7e-13 | 74.3 |
LLPS-Ict-0884 | Ictidomys tridecemlineatus | 26.1 | 3e-14 | 79.0 |
LLPS-Cap-0780 | Cavia porcellus | 26.1 | 1e-12 | 73.9 |
LLPS-Poa-1371 | Pongo abelii | 26.1 | 8e-13 | 74.3 |
LLPS-Gog-2734 | Gorilla gorilla | 26.1 | 8e-13 | 74.3 |
LLPS-Caj-0333 | Callithrix jacchus | 26.1 | 8e-13 | 74.3 |
LLPS-Maf-1220 | Macaca fascicularis | 26.1 | 8e-13 | 74.3 |
LLPS-Mum-1263 | Mus musculus | 26.1 | 7e-13 | 74.3 |
LLPS-Cea-1731 | Cercocebus atys | 26.1 | 8e-13 | 74.3 |
LLPS-Aim-1166 | Ailuropoda melanoleuca | 26.1 | 2e-12 | 73.2 |
LLPS-Paa-0267 | Papio anubis | 26.1 | 8e-13 | 74.3 |
LLPS-Mal-1007 | Mandrillus leucophaeus | 26.1 | 8e-13 | 74.3 |
LLPS-Scf-0819 | Scleropages formosus | 25.97 | 7e-11 | 68.2 |
LLPS-Pes-1084 | Pelodiscus sinensis | 25.85 | 8e-13 | 74.3 |
LLPS-Gaga-1744 | Gallus gallus | 25.6 | 2e-09 | 63.5 |
LLPS-Scp-0050 | Schizosaccharomyces pombe | 25.49 | 2e-15 | 82.0 |
LLPS-Mea-1479 | Mesocricetus auratus | 25.36 | 1e-11 | 70.5 |
LLPS-Scc-0709 | Schizosaccharomyces cryophilus | 24.78 | 6e-14 | 77.8 |
LLPS-Icp-2148 | Ictalurus punctatus | 24.59 | 4e-11 | 68.9 |
LLPS-Osl-0373 | Ostreococcus lucimarinus | 24.03 | 3e-10 | 65.9 |
LLPS-Xim-0859 | Xiphophorus maculatus | 23.47 | 2e-12 | 73.2 |