LLPS-Art-1865
KNAT4
▼ OVERVIEW
| Status: | Reviewed |
| Protein Name: | Homeobox protein knotted-1-like 4; Protein KNAT4 |
| Gene Name: | KNAT4, At5g11060, T5K6_50 |
| Ensembl Gene: | AT5G11060 |
| Ensembl Protein: | AT5G11060.1 |
| Organism: | Arabidopsis thaliana |
| Taxa ID: | 3702 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Description | Tissue/Cell | PMIDs |
|---|---|---|---|
| Nucleolus | "...Comparative analysis revealed that 562 proteins were consistently identified in both experimental data sets." | 3 weeks-old Arabidopsis thaliana plants | 29104584 |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | AT5G11060.1 | AT5G11060.1 |
| UniProt | P48001, KNAT4_ARATH, Q8GXD4, Q9FY59 | |
| GeneBank | AK118296, X92393, CP002688, AL391222 | CAC03454.1, BAC42914.1, AED91630.1, CAA63131.1 |
| RefSeq | NM_121144.4 | NP_196667.2 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MAFHNNHFNH FTDQQQHQPP PPPQQQQQQH FQESAPPNWL LRSDNNFLNL HTAASAAATS 60 61 SDSPSSAAAN QWLSRSSSFL QRGNTANNNN NETSGDVIED VPGGEESMIG EKKEAERWQN 120 121 ARHKAEILSH PLYEQLLSAH VACLRIATPV DQLPRIDAQL AQSQNVVAKY STLEAAQGLL 180 181 AGDDKELDHF MTHYVLLLCS FKEQLQQHVR VHAMEAVMAC WEIEQSLQSF TGVSPGEGTG 240 241 ATMSEDEDEQ VESDAHLFDG SLDGLGFGPL VPTESERSLM ERVRQELKHE LKQGYKEKIV 300 301 DIREEILRKR RAGKLPGDTT SVLKSWWQSH SKWPYPTEED KARLVQETGL QLKQINNWFI 360 361 NQRKRNWHSN PSSSTVSKNK RRSNAGENSG RDR 393 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCGTTTC ATAACAATCA CTTTAATCAT TTCACCGACC AACAACAACA TCAGCCTCCT 60 61 CCTCCGCCGC AACAGCAGCA GCAACAACAT TTTCAAGAAT CAGCACCCCC TAATTGGCTC 120 121 CTCCGCTCCG ACAACAACTT CCTCAATCTC CACACAGCTG CCTCTGCCGC CGCTACAAGC 180 181 TCCGATTCTC CTTCTTCCGC CGCCGCTAAC CAGTGGCTCT CACGATCCTC ATCCTTCCTC 240 241 CAACGAGGCA ACACCGCAAA CAACAACAAC AACGAAACAT CCGGTGACGT CATCGAAGAC 300 301 GTTCCCGGCG GAGAGGAGTC AATGATCGGA GAGAAGAAGG AGGCGGAGAG GTGGCAGAAT 360 361 GCGAGACACA AGGCGGAGAT ACTGTCTCAT CCACTATACG AGCAACTTTT GTCGGCACAC 420 421 GTGGCGTGCC TGAGGATCGC AACGCCGGTG GATCAGCTTC CGAGGATAGA CGCACAGCTT 480 481 GCTCAGTCTC AAAACGTCGT GGCTAAGTAC TCAACTTTAG AAGCCGCTCA AGGACTCCTC 540 541 GCCGGCGATG ACAAGGAGCT TGACCACTTC ATGACGCATT ATGTACTATT GCTTTGCTCT 600 601 TTCAAAGAAC AACTGCAACA GCATGTTCGT GTTCATGCAA TGGAAGCTGT TATGGCCTGT 660 661 TGGGAGATTG AACAGTCGCT TCAAAGTTTT ACAGGGGTAT CTCCTGGTGA AGGCACAGGA 720 721 GCAACAATGT CTGAGGATGA AGATGAGCAA GTAGAGAGTG ATGCTCATTT GTTTGATGGA 780 781 AGCTTAGATG GGTTAGGGTT TGGTCCTCTA GTTCCCACTG AGAGCGAGAG ATCTTTGATG 840 841 GAACGAGTCA GACAAGAACT CAAACATGAA CTCAAGCAGG GTTACAAGGA GAAAATTGTG 900 901 GACATAAGAG AGGAGATACT GAGGAAGAGA AGAGCTGGAA AATTACCAGG AGACACCACC 960 961 TCTGTTCTCA AATCATGGTG GCAATCTCAT TCTAAGTGGC CTTACCCTAC TGAGGAAGAT 1020 1021 AAGGCGAGGT TGGTGCAGGA GACGGGTTTG CAGCTCAAAC AGATAAACAA TTGGTTCATC 1080 1081 AATCAAAGAA AGAGGAATTG GCATAGCAAT CCATCTTCTT CTACCGTCTC AAAGAATAAA 1140 1141 CGCCGAAGCA ATGCAGGTGA AAACAGCGGA AGAGACCGTT GA 1182 |
▼ ANNOTATION
| Disorder | ||||
| IUPred2A | ||||
| Physicochemical | ||||
| Compute pI/Mw | AAindex | |||
| Function | ||||
| CGDB | ||||
| Localization | ||||
| COMPARTMENTS | ||||
| Expression | ||||
| ArrayExpress | ||||
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Arl-1330 | Arabidopsis lyrata | 92.42 | 0.0 | 657 |
| LLPS-Brn-3086 | Brassica napus | 90.38 | 0.0 | 618 |
| LLPS-Bro-1244 | Brassica oleracea | 90.36 | 0.0 | 619 |
| LLPS-Brr-2880 | Brassica rapa | 90.36 | 0.0 | 614 |
| LLPS-Abg-0215 | Absidia glauca | 55.93 | 1e-12 | 72.4 |
| LLPS-Fuv-0600 | Fusarium verticillioides | 55.17 | 8e-13 | 72.0 |
| LLPS-Mel-0663 | Melampsora laricipopulina | 50.88 | 4e-12 | 72.0 |
| LLPS-Xim-2585 | Xiphophorus maculatus | 47.37 | 1e-09 | 63.9 |
| LLPS-Tut-1168 | Tursiops truncatus | 47.17 | 2e-09 | 63.2 |
| LLPS-Dio-2513 | Dipodomys ordii | 47.17 | 2e-09 | 63.5 |
| LLPS-Bot-3425 | Bos taurus | 47.17 | 2e-09 | 63.2 |
| LLPS-Ran-1603 | Rattus norvegicus | 47.17 | 2e-09 | 63.2 |
| LLPS-Mal-4113 | Mandrillus leucophaeus | 47.17 | 2e-09 | 63.2 |
| LLPS-Paa-3523 | Papio anubis | 47.17 | 2e-09 | 63.2 |
| LLPS-Mup-3372 | Mustela putorius furo | 47.17 | 2e-09 | 63.2 |
| LLPS-Aim-2861 | Ailuropoda melanoleuca | 47.17 | 2e-09 | 63.2 |
| LLPS-Myl-3869 | Myotis lucifugus | 47.17 | 2e-09 | 63.2 |
| LLPS-Ova-4420 | Ovis aries | 47.17 | 2e-09 | 63.2 |
| LLPS-Maf-1296 | Macaca fascicularis | 47.17 | 2e-09 | 63.2 |
| LLPS-Mum-0994 | Mus musculus | 47.17 | 2e-09 | 63.5 |
| LLPS-Mea-0553 | Mesocricetus auratus | 47.17 | 2e-09 | 63.2 |
| LLPS-Chs-1639 | Chlorocebus sabaeus | 47.17 | 2e-09 | 63.2 |
| LLPS-Ora-0562 | Ornithorhynchus anatinus | 47.17 | 2e-09 | 63.2 |
| LLPS-Sus-3327 | Sus scrofa | 47.17 | 2e-09 | 63.5 |
| LLPS-Cea-2627 | Cercocebus atys | 47.17 | 2e-09 | 63.2 |
| LLPS-Sah-2226 | Sarcophilus harrisii | 47.17 | 2e-09 | 63.2 |
| LLPS-Aon-2305 | Aotus nancymaae | 47.17 | 2e-09 | 63.2 |
| LLPS-Gog-3336 | Gorilla gorilla | 47.17 | 2e-09 | 63.2 |
| LLPS-Caj-2914 | Callithrix jacchus | 47.17 | 2e-09 | 63.2 |
| LLPS-Poa-0819 | Pongo abelii | 47.17 | 2e-09 | 63.2 |
| LLPS-Caf-4325 | Canis familiaris | 47.17 | 2e-09 | 63.2 |
| LLPS-Cap-4634 | Cavia porcellus | 47.17 | 2e-09 | 63.2 |
| LLPS-Eqc-2066 | Equus caballus | 47.17 | 2e-09 | 63.2 |
| LLPS-Mam-0545 | Macaca mulatta | 47.17 | 2e-09 | 63.2 |
| LLPS-Gaga-1951 | Gallus gallus | 47.17 | 2e-09 | 63.2 |
| LLPS-Xet-0182 | Xenopus tropicalis | 47.17 | 2e-09 | 63.2 |
| LLPS-Cas-0359 | Carlito syrichta | 47.17 | 2e-09 | 63.2 |
| LLPS-Anc-2134 | Anolis carolinensis | 47.17 | 2e-09 | 63.2 |
| LLPS-Nol-2859 | Nomascus leucogenys | 47.17 | 2e-09 | 63.2 |
| LLPS-Ict-3050 | Ictidomys tridecemlineatus | 47.17 | 2e-09 | 63.2 |
| LLPS-Hos-4335 | Homo sapiens | 47.17 | 2e-09 | 63.2 |
| LLPS-Pat-2232 | Pan troglodytes | 47.17 | 2e-09 | 63.2 |
| LLPS-Pap-2444 | Pan paniscus | 47.17 | 2e-09 | 63.2 |
| LLPS-Fec-3802 | Felis catus | 47.17 | 2e-09 | 63.2 |
| LLPS-Mod-1335 | Monodelphis domestica | 47.17 | 2e-09 | 63.2 |
| LLPS-Lac-0432 | Latimeria chalumnae | 47.17 | 2e-09 | 63.2 |
| LLPS-Man-2078 | Macaca nemestrina | 47.17 | 2e-09 | 63.5 |
| LLPS-Anp-2051 | Anas platyrhynchos | 47.17 | 2e-09 | 63.2 |
| LLPS-Loa-3936 | Loxodonta africana | 47.17 | 2e-09 | 63.5 |
| LLPS-Otg-1692 | Otolemur garnettii | 47.17 | 2e-09 | 63.2 |
| LLPS-Pes-0982 | Pelodiscus sinensis | 47.17 | 3e-09 | 62.8 |
| LLPS-Orc-2791 | Oryctolagus cuniculus | 47.17 | 2e-09 | 63.2 |
| LLPS-Fia-2580 | Ficedula albicollis | 47.17 | 2e-09 | 63.2 |
| LLPS-Tar-1680 | Takifugu rubripes | 46.43 | 8e-10 | 64.3 |
| LLPS-Beb-0753 | Beauveria bassiana | 46.27 | 2e-13 | 75.1 |
| LLPS-Icp-2983 | Ictalurus punctatus | 45.45 | 7e-12 | 70.9 |
| LLPS-Asm-2565 | Astyanax mexicanus | 45.16 | 7e-10 | 64.3 |
| LLPS-Leo-2819 | Lepisosteus oculatus | 44.83 | 2e-10 | 66.2 |
| LLPS-Dar-1560 | Danio rerio | 44.83 | 2e-10 | 66.2 |
| LLPS-Scf-3386 | Scleropages formosus | 44.64 | 2e-09 | 63.5 |
| LLPS-Orl-2008 | Oryzias latipes | 44.64 | 1e-09 | 63.5 |
| LLPS-Pof-2568 | Poecilia formosa | 44.64 | 2e-09 | 63.2 |
| LLPS-Coo-1119 | Colletotrichum orbiculare | 44.44 | 3e-13 | 74.7 |
| LLPS-Cog-1316 | Colletotrichum gloeosporioides | 44.44 | 3e-13 | 74.7 |
| LLPS-Ere-1039 | Erinaceus europaeus | 43.1 | 3e-08 | 58.5 |
| LLPS-Urm-0673 | Ursus maritimus | 43.1 | 4e-08 | 58.2 |
| LLPS-Rhb-4745 | Rhinopithecus bieti | 43.08 | 7e-11 | 67.8 |
| LLPS-Ved-1528 | Verticillium dahliae | 42.86 | 2e-13 | 75.1 |
| LLPS-Gaa-2134 | Gasterosteus aculeatus | 41.56 | 2e-10 | 66.2 |
| LLPS-Scm-3847 | Scophthalmus maximus | 41.56 | 4e-10 | 65.5 |
| LLPS-Orn-2793 | Oreochromis niloticus | 41.56 | 2e-10 | 65.9 |
| LLPS-Yal-1457 | Yarrowia lipolytica | 40.0 | 6e-12 | 71.2 |
| LLPS-Cii-1316 | Ciona intestinalis | 39.73 | 3e-09 | 62.8 |
| LLPS-Fud-1078 | Fukomys damarensis | 38.75 | 3e-10 | 65.5 |
| LLPS-Tag-0709 | Taeniopygia guttata | 38.75 | 3e-10 | 65.5 |
| LLPS-Meg-0540 | Meleagris gallopavo | 38.75 | 4e-10 | 65.1 |
| LLPS-Ten-1812 | Tetraodon nigroviridis | 34.02 | 2e-08 | 59.7 |
| LLPS-Coc-0849 | Corchorus capsularis | 31.56 | 1e-27 | 119 |