LLPS-Art-1819
sks9

▼ OVERVIEW

Status: Reviewed
Protein Name: Putative pectinesterase
Gene Name: sks9, SKU5 similar 9, At4g38420, F22I13.190, F22I13_190
Ensembl Gene: AT4G38420
Ensembl Protein: AT4G38420.2
Organism: Arabidopsis thaliana
Taxa ID: 3702
LLPS Type: Others


▼ PROPERTY


——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:
CondensateDescriptionTissue/CellPMIDs
Nucleolus
"...We identified 1602 proteins in the nucleolar and 2544 proteins in the nuclear fraction with an overlap of 1429 proteins."
Arabidopsis thaliana cells26980300

▼ SEQUENCE

Protein Sequence (FASTA)
1     MCWWLNGAVW  TMMMMTISII  SFVQADDPYR  FFDWRVTYGN  ISPLGIPQRG  ILINGQYPGP  60
61    DIYSVTNDNL  IINVHNDLDE  PFLLSWNGVQ  LRKNSYQDGV  YGTTCPIPPG  KNYTYAIQVK  120
121   DQIGSFFYFP  SLAVHKAAGG  FGGFRILSRP  RIPVPFPEPA  GDFTFLIGDW  FKHDHKVLKA  180
181   ILDRGHKLPL  PQGVLINGQG  VSYMSSITVH  KGKTYRFRIS  NVGLQHTLNF  RIQGHQMKLV  240
241   EVEGTHTVQS  MYTSLDIHVG  QSYSVLVTMD  QPDQDYDIVV  STKFVAKKLL  VSSTIHYSNS  300
301   RHSHSSSANS  VHVQQPADEL  DWSIKQARSI  RTNLTASGPR  PNPQGSYHYG  RIKISRTLIL  360
361   ESSAALVKRK  QRYAINGVSF  VPGDTPLKLA  DYFKIKGVFK  MGSIPDKPRR  GRGMRMETSV  420
421   MGAHHRDFLE  IIFQNREKIV  QSYHLDGYSF  WVVGTDRGTW  SKASRREYNL  RDAISRSTTQ  480
481   VYPESWTAVY  VALDNVGMWN  LRSEYWARQY  LGQQFYLRVY  SPTHSLRDEY  LLPKNALLCG  540
541   RASNKHTTP  549
Nucleotide CDS Sequence (FASTA)
1     ATGTGCTGGT  GGCTAAATGG  GGCCGTTTGG  ACGATGATGA  TGATGACGAT  ATCCATCATT  60
61    TCTTTTGTTC  AAGCTGATGA  TCCCTACCGT  TTTTTCGACT  GGAGAGTCAC  TTACGGCAAC  120
121   ATTTCTCCAC  TTGGCATTCC  TCAAAGGGGA  ATCCTGATAA  ACGGACAATA  TCCAGGACCC  180
181   GATATTTACT  CAGTCACCAA  TGACAATTTG  ATCATCAATG  TTCACAACGA  TCTCGACGAG  240
241   CCCTTTCTCT  TATCTTGGAA  CGGAGTGCAA  CTGAGGAAGA  ATTCTTACCA  AGATGGAGTG  300
301   TATGGGACGA  CTTGTCCAAT  CCCACCGGGT  AAAAACTACA  CTTATGCCAT  CCAAGTCAAA  360
361   GACCAGATCG  GTAGTTTCTT  CTATTTCCCT  TCCCTCGCCG  TTCACAAAGC  TGCCGGTGGT  420
421   TTTGGCGGTT  TCCGTATCCT  CAGCCGCCCT  CGCATCCCCG  TCCCTTTCCC  TGAACCCGCT  480
481   GGAGATTTCA  CCTTCCTCAT  TGGTGATTGG  TTTAAGCATG  ACCACAAGGT  TTTGAAGGCA  540
541   ATTTTGGATA  GAGGACACAA  GCTACCTTTG  CCTCAAGGGG  TTTTGATCAA  TGGCCAAGGA  600
601   GTCAGTTACA  TGTCTTCCAT  CACCGTCCAC  AAAGGTAAAA  CATACAGATT  TAGGATATCG  660
661   AATGTAGGGC  TTCAACACAC  TCTGAATTTC  AGAATCCAAG  GTCATCAGAT  GAAGCTCGTT  720
721   GAGGTAGAGG  GAACACACAC  AGTCCAGTCC  ATGTATACCT  CTCTCGACAT  TCACGTTGGA  780
781   CAGTCTTACT  CGGTCTTGGT  CACCATGGAC  CAGCCTGACC  AAGACTATGA  CATTGTCGTC  840
841   TCCACAAAAT  TTGTCGCCAA  AAAACTCTTG  GTCTCATCTA  CTATCCACTA  CTCCAACTCA  900
901   AGACATAGCC  ACTCATCTTC  TGCTAATTCA  GTCCATGTTC  AACAACCTGC  CGATGAACTA  960
961   GATTGGTCTA  TCAAACAAGC  CCGGTCCATT  AGGACCAATC  TAACCGCGTC  TGGGCCAAGG  1020
1021  CCTAACCCTC  AGGGTTCGTA  CCACTATGGT  CGAATCAAGA  TTTCTAGGAC  TTTGATATTG  1080
1081  GAAAGCTCAG  CGGCACTAGT  GAAGAGGAAG  CAACGCTACG  CCATAAACGG  AGTGTCGTTT  1140
1141  GTACCTGGAG  ATACTCCGCT  AAAGCTTGCG  GATTACTTCA  AGATCAAAGG  CGTTTTCAAA  1200
1201  ATGGGAAGCA  TACCTGACAA  GCCGAGAAGA  GGAAGAGGGA  TGAGAATGGA  GACGTCAGTG  1260
1261  ATGGGAGCAC  ACCATAGAGA  CTTCCTTGAA  ATCATATTTC  AAAACCGCGA  GAAGATCGTC  1320
1321  CAAAGCTACC  ACCTCGATGG  ATATAGTTTT  TGGGTTGTTG  GGACGGATAG  AGGAACATGG  1380
1381  TCAAAAGCAA  GCAGACGAGA  GTATAATCTT  AGGGATGCTA  TTTCTCGCTC  CACCACTCAG  1440
1441  GTACAAATAG  TTTCTAACTC  CATATATCTT  ACCAAAAATT  TTAAAAAATC  ATCTCAAAAC  1500
1501  TAG  1503

▼ ANNOTATION

Disorder
IUPred2A
Physicochemical
Compute pI/MwAAindex
Function
PIRSF
Localization
COMPARTMENTS

▼ ORTHOLOGY

DrLLPS IDOrganismIdentityE-valueScore
LLPS-Arl-1956Arabidopsis lyrata94.880.01009
LLPS-Brn-0907Brassica napus85.660.0 915
LLPS-Brr-1421Brassica rapa85.660.0 915
LLPS-Bro-2844Brassica oleracea72.640.0 765
LLPS-Viv-0955Vitis vinifera67.170.0 723
LLPS-Mae-1247Manihot esculenta66.790.0 690
LLPS-Pot-0434Populus trichocarpa66.030.0 695
LLPS-Via-1815Vigna angularis65.720.0 677
LLPS-Vir-0990Vigna radiata65.720.0 676
LLPS-Phv-0641Phaseolus vulgaris65.530.0 674
LLPS-Prp-1815Prunus persica65.150.0 693
LLPS-Hea-1389Helianthus annuus65.090.0 694
LLPS-Nia-0170Nicotiana attenuata65.090.0 671
LLPS-Glm-0670Glycine max64.710.0 686
LLPS-Gor-1108Gossypium raimondii63.950.0 687
LLPS-Sob-0061Sorghum bicolor63.760.0 694
LLPS-Met-2031Medicago truncatula63.710.0 654
LLPS-Thc-1888Theobroma cacao63.640.0 679
LLPS-Sol-2337Solanum lycopersicum63.570.0 680
LLPS-Sot-0943Solanum tuberosum63.380.0 677
LLPS-Dac-1552Daucus carota63.380.0 687
LLPS-Zem-1745Zea mays63.380.0 690
LLPS-Lep-1658Leersia perrieri58.580.0 591
LLPS-Mua-0926Musa acuminata58.490.0 605
LLPS-Coc-0806Corchorus capsularis58.331e-166 514
LLPS-Sei-2093Setaria italica56.70.0 578
LLPS-Tra-1132Triticum aestivum56.050.0 595
LLPS-Orgl-1066Oryza glumaepatula55.920.0 576
LLPS-Ori-2177Oryza indica55.920.0 574
LLPS-Orb-0694Oryza barthii55.920.0 574
LLPS-Orni-2145Oryza nivara55.920.0 574
LLPS-Orr-0953Oryza rufipogon55.660.0 568
LLPS-Orm-0525Oryza meridionalis55.640.0 572
LLPS-Orp-0824Oryza punctata55.470.0 563
LLPS-Org-2213Oryza glaberrima55.280.0 568
LLPS-Brd-2452Brachypodium distachyon54.370.0 545
LLPS-Sem-2274Selaginella moellendorffii52.690.0 558
LLPS-Cus-0501Cucumis sativus50.196e-170 502
LLPS-Ors-2380Oryza sativa48.894e-168 497
LLPS-Amt-2002Amborella trichopoda48.113e-160 477
LLPS-Tru-1826Triticum urartu47.844e-155 464
LLPS-Hov-0210Hordeum vulgare47.595e-170 502
LLPS-Orbr-0554Oryza brachyantha47.223e-165 489
LLPS-Spr-1433Sporisorium reilianum25.58e-2097.4
LLPS-Php-1865Physcomitrella patens24.915e-45 172
LLPS-Chc-0024Chondrus crispus22.871e-1789.4