LLPS-Art-1617
RPP2C
▼ OVERVIEW
| Status: | Reviewed |
| Protein Name: | 60S acidic ribosomal protein P2-3 |
| Gene Name: | RPP2C, At3g28500, T20D4.1 |
| Ensembl Gene: | AT3G28500 |
| Ensembl Protein: | AT3G28500.1 |
| Organism: | Arabidopsis thaliana |
| Taxa ID: | 3702 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Description | Tissue/Cell | PMIDs |
|---|---|---|---|
| Nucleolus | "...We identified 1602 proteins in the nucleolar and 2544 proteins in the nuclear fraction with an overlap of 1429 proteins." | Arabidopsis thaliana cells | 26980300 |
▼ FUNCTION
| Plays an important role in the elongation step of protein synthesis. |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | AT3G28500.1 | AT3G28500.1 |
| UniProt | Q9LH85, RLA23_ARATH | |
| GeneBank | AP002059, CP002686, BT003971, BT005087, AY086773 | AEE77453.1, AAO50620.1, BAB01952.1, AAM63824.1, AAO42015.1 |
| RefSeq | NM_113770.3 | NP_189491.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MKVIAAFLLA KLGGNENPTS NDLKKILESV GAEIDETKID LLFSLIKDHD VTELIAAGRE 60 61 KMSALSSGGP AVAMVAGGGG GGAASAAEPV AESKKKVEEV KDESSDDAGM MGLFD 115 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGAAGGTGA TTGCTGCATT TCTCCTCGCG AAACTCGGTG GAAACGAGAA TCCAACCTCA 60 61 AATGATCTGA AGAAGATCTT GGAATCTGTT GGTGCTGAAA TCGATGAAAC GAAGATAGAT 120 121 CTGTTGTTTT CTCTCATCAA GGATCATGAT GTGACGGAGC TTATTGCTGC TGGGAGAGAA 180 181 AAGATGTCTG CTTTGTCTTC TGGTGGTCCA GCTGTTGCTA TGGTGGCTGG AGGTGGTGGT 240 241 GGTGGTGCTG CTTCGGCGGC TGAGCCGGTT GCTGAATCTA AGAAGAAGGT TGAAGAAGTG 300 301 AAGGATGAAT CTTCTGACGA TGCAGGCATG ATGGGTCTCT TTGATTGA 348 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Cytosol | |
Cellular Component | Cytosolic ribosome | |
Cellular Component | Plasma membrane | |
Cellular Component | Polysomal ribosome | |
Molecular Function | Structural constituent of ribosome | |
Biological Process | Translational elongation |
▼ ANNOTATION
| Disorder | ||||
| IUPred2A | ||||
| Physicochemical | ||||
| Compute pI/Mw | AAindex | |||
| Function | ||||
| PIRSF | ||||
| Localization | ||||
| COMPARTMENTS | ||||
| Expression | ||||
| ArrayExpress | ||||
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Arl-0281 | Arabidopsis lyrata | 89.66 | 2e-39 | 134 |
| LLPS-Bro-1262 | Brassica oleracea | 81.54 | 1e-29 | 109 |
| LLPS-Brn-0429 | Brassica napus | 80.0 | 5e-29 | 107 |
| LLPS-Brr-0873 | Brassica rapa | 76.92 | 4e-28 | 105 |
| LLPS-Sol-0135 | Solanum lycopersicum | 66.13 | 9e-20 | 83.6 |
| LLPS-Sot-2241 | Solanum tuberosum | 65.62 | 1e-22 | 91.3 |
| LLPS-Nia-2369 | Nicotiana attenuata | 65.62 | 4e-23 | 92.4 |
| LLPS-Icp-1273 | Ictalurus punctatus | 64.1 | 2e-10 | 58.5 |
| LLPS-Sei-2450 | Setaria italica | 63.08 | 4e-21 | 86.7 |
| LLPS-Zem-1940 | Zea mays | 63.08 | 1e-20 | 87.0 |
| LLPS-Viv-1359 | Vitis vinifera | 63.08 | 1e-19 | 83.2 |
| LLPS-Mae-1310 | Manihot esculenta | 63.08 | 3e-20 | 84.7 |
| LLPS-Sob-1482 | Sorghum bicolor | 63.08 | 4e-21 | 87.8 |
| LLPS-Hov-1437 | Hordeum vulgare | 61.54 | 2e-19 | 82.8 |
| LLPS-Brd-0541 | Brachypodium distachyon | 61.54 | 3e-20 | 84.7 |
| LLPS-Coc-1166 | Corchorus capsularis | 61.54 | 8e-19 | 80.9 |
| LLPS-Thc-2377 | Theobroma cacao | 60.0 | 6e-19 | 81.3 |
| LLPS-Dac-1421 | Daucus carota | 60.0 | 4e-18 | 80.5 |
| LLPS-Pot-0073 | Populus trichocarpa | 60.0 | 7e-19 | 80.9 |
| LLPS-Gor-2748 | Gossypium raimondii | 60.0 | 5e-19 | 81.6 |
| LLPS-Tra-2153 | Triticum aestivum | 58.46 | 2e-18 | 79.7 |
| LLPS-Sem-1695 | Selaginella moellendorffii | 58.46 | 2e-17 | 76.3 |
| LLPS-Mua-0912 | Musa acuminata | 58.46 | 9e-19 | 80.9 |
| LLPS-Hea-0029 | Helianthus annuus | 58.46 | 5e-18 | 79.7 |
| LLPS-Tru-1557 | Triticum urartu | 58.46 | 2e-18 | 79.7 |
| LLPS-Amt-1242 | Amborella trichopoda | 58.06 | 4e-17 | 76.3 |
| LLPS-Prp-0456 | Prunus persica | 56.92 | 3e-17 | 76.6 |
| LLPS-Via-2130 | Vigna angularis | 55.38 | 2e-16 | 75.5 |
| LLPS-Met-2539 | Medicago truncatula | 55.38 | 1e-17 | 77.8 |
| LLPS-Phv-0029 | Phaseolus vulgaris | 55.38 | 4e-15 | 72.4 |
| LLPS-Lep-0044 | Leersia perrieri | 53.85 | 2e-16 | 74.7 |
| LLPS-Cus-0649 | Cucumis sativus | 53.85 | 3e-17 | 76.6 |
| LLPS-Glm-1351 | Glycine max | 53.85 | 3e-16 | 74.3 |
| LLPS-Orbr-2263 | Oryza brachyantha | 53.85 | 7e-17 | 75.9 |
| LLPS-Orb-0504 | Oryza barthii | 52.38 | 2e-17 | 77.0 |
| LLPS-Orni-1811 | Oryza nivara | 52.38 | 7e-17 | 77.0 |
| LLPS-Orgl-1664 | Oryza glumaepatula | 52.31 | 3e-16 | 74.3 |
| LLPS-Ori-2245 | Oryza indica | 52.31 | 7e-16 | 74.7 |
| LLPS-Orm-0671 | Oryza meridionalis | 52.31 | 4e-16 | 75.1 |
| LLPS-Orr-2293 | Oryza rufipogon | 52.31 | 3e-16 | 74.3 |
| LLPS-Org-0715 | Oryza glaberrima | 52.31 | 3e-16 | 74.3 |
| LLPS-Ors-1943 | Oryza sativa | 52.31 | 4e-16 | 74.3 |
| LLPS-Asm-2711 | Astyanax mexicanus | 51.79 | 1e-11 | 62.0 |
| LLPS-Php-2349 | Physcomitrella patens | 51.61 | 1e-13 | 67.0 |
| LLPS-Orp-0870 | Oryza punctata | 50.77 | 9e-16 | 72.8 |
| LLPS-Pof-2984 | Poecilia formosa | 50.77 | 5e-15 | 70.9 |
| LLPS-Orn-3561 | Oreochromis niloticus | 50.77 | 2e-15 | 72.0 |
| LLPS-Vir-2161 | Vigna radiata | 49.21 | 1e-10 | 58.9 |
| LLPS-Pyt-0270 | Pyrenophora teres | 47.69 | 1e-08 | 53.1 |
| LLPS-Cis-0501 | Ciona savignyi | 47.69 | 3e-15 | 71.2 |
| LLPS-Pytr-1214 | Pyrenophora triticirepentis | 47.69 | 1e-08 | 53.1 |
| LLPS-Fus-1576 | Fusarium solani | 47.69 | 1e-13 | 67.0 |
| LLPS-Leo-3879 | Lepisosteus oculatus | 46.88 | 2e-12 | 63.9 |
| LLPS-Cae-2071 | Caenorhabditis elegans | 46.55 | 3e-08 | 52.4 |
| LLPS-Abg-0904 | Absidia glauca | 46.15 | 2e-13 | 66.6 |
| LLPS-Nec-1242 | Neurospora crassa | 46.15 | 5e-11 | 60.1 |
| LLPS-Chr-1241 | Chlamydomonas reinhardtii | 46.15 | 4e-13 | 65.9 |
| LLPS-Fuv-0535 | Fusarium verticillioides | 46.15 | 4e-08 | 52.0 |
| LLPS-Cii-1792 | Ciona intestinalis | 46.15 | 7e-14 | 67.8 |
| LLPS-Trv-1044 | Trichoderma virens | 46.15 | 8e-12 | 62.0 |
| LLPS-Fuo-0345 | Fusarium oxysporum | 46.15 | 4e-08 | 52.0 |
| LLPS-Phn-1234 | Phaeosphaeria nodorum | 46.15 | 3e-08 | 52.0 |
| LLPS-Tag-0030 | Taeniopygia guttata | 46.15 | 7e-13 | 65.1 |
| LLPS-Gaga-2974 | Gallus gallus | 46.15 | 6e-13 | 65.5 |
| LLPS-Ved-0122 | Verticillium dahliae | 46.15 | 5e-13 | 65.5 |
| LLPS-Beb-1477 | Beauveria bassiana | 46.15 | 2e-12 | 63.9 |
| LLPS-Meg-3124 | Meleagris gallopavo | 46.15 | 6e-13 | 65.5 |
| LLPS-Scm-0199 | Scophthalmus maximus | 46.15 | 1e-13 | 67.0 |
| LLPS-Fia-1279 | Ficedula albicollis | 46.15 | 7e-13 | 65.1 |
| LLPS-Sac-1477 | Saccharomyces cerevisiae | 45.45 | 6e-10 | 57.0 |
| LLPS-Kop-1390 | Komagataella pastoris | 45.16 | 6e-10 | 57.0 |
| LLPS-Gaa-3795 | Gasterosteus aculeatus | 44.62 | 6e-12 | 62.4 |
| LLPS-Blg-0136 | Blumeria graminis | 44.62 | 4e-11 | 60.5 |
| LLPS-Sah-0799 | Sarcophilus harrisii | 44.62 | 6e-12 | 62.8 |
| LLPS-Spr-0610 | Sporisorium reilianum | 44.62 | 1e-10 | 58.9 |
| LLPS-Anc-0591 | Anolis carolinensis | 44.62 | 6e-13 | 65.1 |
| LLPS-Osl-0661 | Ostreococcus lucimarinus | 44.62 | 9e-12 | 62.0 |
| LLPS-Trr-0693 | Trichoderma reesei | 44.62 | 7e-12 | 62.4 |
| LLPS-Mao-1487 | Magnaporthe oryzae | 43.14 | 6e-07 | 48.5 |
| LLPS-Crn-1462 | Cryptococcus neoformans | 43.08 | 4e-11 | 60.1 |
| LLPS-Coo-1364 | Colletotrichum orbiculare | 43.08 | 8e-07 | 48.1 |
| LLPS-Usm-1107 | Ustilago maydis | 43.08 | 3e-10 | 58.2 |
| LLPS-Cogr-0509 | Colletotrichum graminicola | 43.08 | 8e-07 | 47.8 |
| LLPS-Anp-3083 | Anas platyrhynchos | 43.08 | 4e-09 | 54.7 |
| LLPS-Pes-1944 | Pelodiscus sinensis | 43.08 | 6e-12 | 62.4 |
| LLPS-Drm-0651 | Drosophila melanogaster | 41.54 | 2e-10 | 58.5 |
| LLPS-Zyt-1363 | Zymoseptoria tritici | 41.54 | 6e-06 | 45.4 |
| LLPS-Scs-0756 | Sclerotinia sclerotiorum | 41.54 | 8e-11 | 59.3 |
| LLPS-Dar-0308 | Danio rerio | 41.54 | 6e-11 | 59.7 |
| LLPS-Gas-0667 | Galdieria sulphuraria | 40.91 | 2e-08 | 52.4 |
| LLPS-Map-0749 | Magnaporthe poae | 40.82 | 7e-06 | 45.4 |
| LLPS-Xim-0321 | Xiphophorus maculatus | 40.62 | 1e-10 | 58.9 |
| LLPS-Chc-0640 | Chondrus crispus | 40.0 | 2e-10 | 58.2 |
| LLPS-Ran-3539 | Rattus norvegicus | 40.0 | 7e-11 | 59.7 |
| LLPS-Aon-4637 | Aotus nancymaae | 40.0 | 4e-10 | 57.0 |
| LLPS-Mea-3562 | Mesocricetus auratus | 40.0 | 1e-10 | 58.9 |
| LLPS-Mam-0280 | Macaca mulatta | 40.0 | 2e-10 | 58.5 |
| LLPS-Put-1215 | Puccinia triticina | 40.0 | 2e-09 | 55.8 |
| LLPS-Dos-1623 | Dothistroma septosporum | 40.0 | 2e-10 | 58.5 |
| LLPS-Cym-0649 | Cyanidioschyzon merolae | 38.71 | 6e-10 | 57.0 |
| LLPS-Dio-3343 | Dipodomys ordii | 38.46 | 5e-10 | 57.4 |
| LLPS-Bot-4779 | Bos taurus | 38.46 | 6e-10 | 57.0 |
| LLPS-Scp-1528 | Schizosaccharomyces pombe | 38.46 | 4e-10 | 57.4 |
| LLPS-Tut-0860 | Tursiops truncatus | 38.46 | 8e-10 | 56.6 |
| LLPS-Paa-2714 | Papio anubis | 38.46 | 6e-10 | 57.0 |
| LLPS-Mal-2696 | Mandrillus leucophaeus | 38.46 | 6e-10 | 57.0 |
| LLPS-Mup-3101 | Mustela putorius furo | 38.46 | 2e-09 | 55.8 |
| LLPS-Aim-0933 | Ailuropoda melanoleuca | 38.46 | 7e-10 | 57.0 |
| LLPS-Cea-1008 | Cercocebus atys | 38.46 | 6e-10 | 57.0 |
| LLPS-Sus-2205 | Sus scrofa | 38.46 | 7e-10 | 57.0 |
| LLPS-Mum-4726 | Mus musculus | 38.46 | 5e-10 | 57.4 |
| LLPS-Maf-3475 | Macaca fascicularis | 38.46 | 6e-10 | 57.0 |
| LLPS-Chs-0115 | Chlorocebus sabaeus | 38.46 | 6e-10 | 57.0 |
| LLPS-Ora-3119 | Ornithorhynchus anatinus | 38.46 | 6e-08 | 51.2 |
| LLPS-Fud-2082 | Fukomys damarensis | 38.46 | 5e-10 | 57.4 |
| LLPS-Caj-4845 | Callithrix jacchus | 38.46 | 6e-10 | 57.0 |
| LLPS-Gog-1448 | Gorilla gorilla | 38.46 | 6e-10 | 57.0 |
| LLPS-Poa-3906 | Pongo abelii | 38.46 | 6e-10 | 57.0 |
| LLPS-Eqc-4195 | Equus caballus | 38.46 | 7e-10 | 57.0 |
| LLPS-Nol-2370 | Nomascus leucogenys | 38.46 | 6e-10 | 57.0 |
| LLPS-Man-0974 | Macaca nemestrina | 38.46 | 6e-10 | 57.0 |
| LLPS-Urm-1805 | Ursus maritimus | 38.46 | 1e-09 | 56.2 |
| LLPS-Pap-1449 | Pan paniscus | 38.46 | 6e-10 | 57.0 |
| LLPS-Pat-2468 | Pan troglodytes | 38.46 | 6e-10 | 57.0 |
| LLPS-Hos-0827 | Homo sapiens | 38.46 | 6e-10 | 57.0 |
| LLPS-Lac-2168 | Latimeria chalumnae | 38.46 | 1e-10 | 58.5 |
| LLPS-Fec-3853 | Felis catus | 38.46 | 8e-10 | 56.6 |
| LLPS-Rhb-0678 | Rhinopithecus bieti | 38.46 | 6e-10 | 57.0 |
| LLPS-Otg-2405 | Otolemur garnettii | 38.46 | 8e-10 | 56.6 |
| LLPS-Tar-2061 | Takifugu rubripes | 37.5 | 4e-09 | 54.7 |
| LLPS-Ten-1727 | Tetraodon nigroviridis | 37.5 | 3e-09 | 55.1 |
| LLPS-Orc-3905 | Oryctolagus cuniculus | 37.1 | 9e-07 | 47.4 |
| LLPS-Scf-2245 | Scleropages formosus | 36.92 | 5e-08 | 52.0 |
| LLPS-Ict-1761 | Ictidomys tridecemlineatus | 36.92 | 3e-09 | 55.1 |
| LLPS-Xet-3393 | Xenopus tropicalis | 36.92 | 6e-09 | 54.3 |
| LLPS-Asn-1226 | Aspergillus nidulans | 36.54 | 4e-06 | 45.8 |
| LLPS-Scj-1255 | Schizosaccharomyces japonicus | 35.38 | 6e-07 | 48.1 |
| LLPS-Scc-0304 | Schizosaccharomyces cryophilus | 35.38 | 2e-09 | 55.1 |
| LLPS-Caf-2964 | Canis familiaris | 35.38 | 1e-07 | 50.4 |
| LLPS-Cap-4399 | Cavia porcellus | 35.38 | 1e-08 | 53.1 |
| LLPS-Miv-0945 | Microbotryum violaceum | 35.38 | 3e-06 | 46.6 |