LLPS-Art-1560
PAGR
▼ OVERVIEW
Status: | Reviewed |
Protein Name: | Protein PECTIC ARABINOGALACTAN SYNTHESIS-RELATED; O-fucosyltransferase 26; O-FucT-26; O-fucosyltransferase family protein |
Gene Name: | PAGR, OFUT26, At3g26370, F20C19.9 |
Ensembl Gene: | AT3G26370 |
Ensembl Protein: | AT3G26370.1 |
Organism: | Arabidopsis thaliana |
Taxa ID: | 3702 |
LLPS Type: | Client |
▼ Classification
Condensates:
Condensate | Description | Tissue/Cell | PMIDs |
---|---|---|---|
Nucleolus | "...We identified 1602 proteins in the nucleolar and 2544 proteins in the nuclear fraction with an overlap of 1429 proteins." | Arabidopsis thaliana cells | 26980300 |
▼ FUNCTION
Glycosyltransferase involved in the biosynthesis of pectic type-II arabinogalactans. |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | AT3G26370.1 | AT3G26370.1 |
Ensembl | AT3G26370.2 | AT3G26370.2 |
UniProt | Q9LIN9, PAGR_ARATH, Q8LAU4 | |
GeneBank | AK226720, CP002686, KY906066, AY087604, AP001298 | ARJ31430.1, AAM67369.1, BAE98825.1, AEE77150.1, BAB02197.1 |
RefSeq | NM_113544.5 | NP_566791.2 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MAELRHSSSL GSRSSSSPLR AAGDEDSSSP HVHDHSPNGG DDEDGRPRHP SRDRDRPIWF 60 61 HSLFPFFGDD PRVSPQKNKI SLLLILILAI ASLISVYGII NHLNAPYLCK KDGIVLNCPH 120 121 VKESPSPWEN PLSATTSWKP CAERRIGGIS DLPPENETNG YVFIHAEGGL NQQRIAICNA 180 181 VAVAKIMNAT LILPVLKQDQ IWKDTTKFED IFDVDHFIDY LKDDVRIVRD IPDWFTDKAE 240 241 LFSSIRRTVK NIPKYAAAQF YIDNVLPRIK EKKIMALKPF VDRLGYDNVP QEINRLRCRV 300 301 NYHALKFLPE IEQMADSLVS RMRNRTGNPN PYMALHLRFE KGMVGLSFCD FVGTREEKVK 360 361 MAEYRQKEWP RRFKNGSHLW QLALQKRKEG RCPLEPGEVA VILRAMGYPK ETQIYVASGQ 420 421 VYGGQNRMAP LRNMFPNLVT KEDLAGKEEL TTFRKHVTSL AALDFLVCLK SDVFVMTHGG 480 481 NFAKLIIGAR RYMGHRQKSI KPDKGLMSKS FGDPYMGWAT FVEDVVVTHQ TRTGLPEETF 540 541 PNYDLWENPL TPCMCKA 557 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGCAGAGT TACGGCACTC GAGCTCTCTC GGTAGCCGAT CTTCTTCTTC TCCGTTACGT 60 61 GCCGCCGGAG ATGAGGATTC TTCATCGCCT CATGTACACG ATCACTCTCC TAACGGCGGA 120 121 GACGACGAAG ATGGTCGCCC ACGTCATCCT TCTAGAGATC GAGACCGTCC GATCTGGTTT 180 181 CACTCTTTGT TTCCTTTCTT CGGTGATGAT CCTAGGGTTT CTCCTCAGAA GAATAAAATC 240 241 TCGCTTCTAT TGATTTTGAT TCTCGCTATT GCTAGCTTGA TCTCAGTTTA TGGGATTATT 300 301 AATCACTTGA ATGCTCCTTA TTTATGTAAA AAAGATGGGA TTGTGCTAAA CTGTCCTCAT 360 361 GTAAAAGAGT CACCTTCTCC TTGGGAGAAT CCTTTATCTG CAACAACTTC TTGGAAGCCT 420 421 TGTGCTGAGC GGCGGATTGG TGGAATCTCA GATCTTCCTC CTGAGAATGA AACAAATGGC 480 481 TATGTATTCA TTCATGCTGA AGGTGGTTTG AATCAGCAGC GAATTGCTAT CTGCAACGCA 540 541 GTAGCTGTTG CCAAGATTAT GAATGCAACA CTGATTCTAC CAGTACTGAA GCAGGACCAA 600 601 ATATGGAAAG ACACAACAAA ATTTGAAGAC ATTTTTGATG TAGATCATTT CATTGATTAC 660 661 TTGAAGGATG ATGTCCGAAT TGTTCGAGAC ATACCTGACT GGTTCACTGA CAAAGCAGAG 720 721 CTATTCTCTA GTATAAGAAG AACAGTCAAA AACATTCCCA AATATGCAGC AGCCCAATTT 780 781 TATATTGACA ATGTTTTACC TCGGATAAAG GAGAAGAAGA TAATGGCCTT GAAGCCTTTT 840 841 GTCGATCGAC TTGGGTATGA CAATGTACCT CAAGAAATCA ACAGATTACG ATGCCGTGTA 900 901 AATTATCATG CTCTCAAATT TCTTCCAGAG ATAGAGCAGA TGGCTGATTC ACTTGTTTCT 960 961 AGAATGAGAA ATCGCACTGG AAATCCAAAT CCATATATGG CTCTTCATCT TAGATTCGAG 1020 1021 AAAGGAATGG TTGGTCTATC GTTCTGTGAT TTTGTGGGGA CAAGGGAAGA GAAAGTTAAA 1080 1081 ATGGCAGAAT ACAGACAAAA GGAATGGCCT CGGCGTTTCA AGAATGGTTC CCATCTCTGG 1140 1141 CAGCTCGCCT TGCAGAAGCG CAAAGAAGGT CGATGCCCTC TTGAGCCAGG AGAAGTTGCT 1200 1201 GTGATCCTAC GTGCAATGGG CTATCCAAAA GAAACACAAA TCTATGTTGC ATCTGGTCAA 1260 1261 GTCTATGGCG GTCAAAACCG TATGGCTCCA CTAAGAAACA TGTTCCCAAA TTTGGTAACA 1320 1321 AAGGAGGATT TAGCAGGCAA AGAGGAACTA ACAACGTTTA GAAAACACGT TACAAGTCTT 1380 1381 GCGGCTCTAG ATTTCTTGGT GTGCTTGAAA TCAGATGTAT TTGTGATGAC ACACGGTGGA 1440 1441 AACTTTGCAA AACTGATCAT CGGAGCGCGT AGATATATGG GGCATCGCCA GAAATCAATC 1500 1501 AAACCGGATA AAGGGTTGAT GTCGAAATCA TTTGGGGATC CTTACATGGG ATGGGCAACT 1560 1561 TTTGTGGAAG ATGTAGTTGT AACCCATCAA ACACGAACCG GTTTACCTGA AGAAACTTTC 1620 1621 CCTAACTATG ATCTTTGGGA AAATCCTCTC ACTCCATGCA TGTGTAAAGC TTGA 1674 |
▼ KEYWORD
ID | Family |
Carbohydrate metabolism | |
Cell wall biogenesis/degradation | |
Complete proteome | |
Fucose metabolism | |
Glycoprotein | |
Glycosyltransferase | |
Golgi apparatus | |
Membrane | |
Reference proteome | |
Signal-anchor | |
Transferase | |
Transmembrane | |
Transmembrane helix
|
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Endosome | |
Cellular Component | Golgi apparatus | |
Cellular Component | Golgi membrane | |
Cellular Component | Integral component of membrane | |
Cellular Component | Trans-Golgi network | |
Molecular Function | Transferase activity, transferring glycosyl groups | |
Biological Process | Cell wall pectin biosynthetic process | |
Biological Process | Fucose metabolic process |
▼ ANNOTATION
Disorder | ||||
IUPred2A |
PTM | ||||
EPSD |
Physicochemical | ||||
Compute pI/Mw | AAindex |
Function | ||||
PIRSF |
Localization | ||||
COMPARTMENTS |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Arl-0937 | Arabidopsis lyrata | 99.81 | 0.0 | 1017 |
LLPS-Bro-2901 | Brassica oleracea | 95.56 | 0.0 | 993 |
LLPS-Brn-2919 | Brassica napus | 95.56 | 0.0 | 993 |
LLPS-Vir-2152 | Vigna radiata | 95.38 | 0.0 | 734 |
LLPS-Brr-2535 | Brassica rapa | 95.0 | 0.0 | 989 |
LLPS-Coc-2235 | Corchorus capsularis | 90.96 | 0.0 | 929 |
LLPS-Thc-0527 | Theobroma cacao | 90.76 | 0.0 | 930 |
LLPS-Dac-1960 | Daucus carota | 89.71 | 0.0 | 778 |
LLPS-Mae-1400 | Manihot esculenta | 89.36 | 0.0 | 913 |
LLPS-Pot-1633 | Populus trichocarpa | 89.25 | 0.0 | 900 |
LLPS-Phv-2080 | Phaseolus vulgaris | 89.02 | 0.0 | 902 |
LLPS-Glm-2698 | Glycine max | 88.82 | 0.0 | 905 |
LLPS-Viv-1087 | Vitis vinifera | 88.55 | 0.0 | 910 |
LLPS-Met-1103 | Medicago truncatula | 88.55 | 0.0 | 910 |
LLPS-Mua-0482 | Musa acuminata | 88.27 | 0.0 | 871 |
LLPS-Gor-1385 | Gossypium raimondii | 88.22 | 0.0 | 907 |
LLPS-Prp-0722 | Prunus persica | 87.35 | 0.0 | 899 |
LLPS-Cus-1392 | Cucumis sativus | 87.35 | 0.0 | 904 |
LLPS-Tru-0639 | Triticum urartu | 87.14 | 0.0 | 758 |
LLPS-Amt-0728 | Amborella trichopoda | 86.49 | 0.0 | 841 |
LLPS-Nia-2318 | Nicotiana attenuata | 85.48 | 0.0 | 879 |
LLPS-Hea-0484 | Helianthus annuus | 85.34 | 0.0 | 884 |
LLPS-Sot-2090 | Solanum tuberosum | 85.28 | 0.0 | 870 |
LLPS-Sol-0708 | Solanum lycopersicum | 85.08 | 0.0 | 865 |
LLPS-Tra-0812 | Triticum aestivum | 84.82 | 0.0 | 818 |
LLPS-Sob-2210 | Sorghum bicolor | 84.68 | 0.0 | 829 |
LLPS-Org-1277 | Oryza glaberrima | 84.6 | 0.0 | 833 |
LLPS-Brd-0370 | Brachypodium distachyon | 84.6 | 0.0 | 821 |
LLPS-Orbr-1657 | Oryza brachyantha | 84.38 | 0.0 | 823 |
LLPS-Orr-1186 | Oryza rufipogon | 83.95 | 0.0 | 822 |
LLPS-Orm-1959 | Oryza meridionalis | 83.95 | 0.0 | 823 |
LLPS-Ori-1636 | Oryza indica | 83.95 | 0.0 | 822 |
LLPS-Ors-1552 | Oryza sativa | 83.88 | 0.0 | 827 |
LLPS-Zem-2284 | Zea mays | 83.77 | 0.0 | 814 |
LLPS-Orp-1738 | Oryza punctata | 83.73 | 0.0 | 820 |
LLPS-Sei-0452 | Setaria italica | 83.73 | 0.0 | 822 |
LLPS-Lep-0944 | Leersia perrieri | 82.65 | 0.0 | 807 |
LLPS-Hov-1690 | Hordeum vulgare | 82.1 | 0.0 | 810 |
LLPS-Orb-1941 | Oryza barthii | 81.13 | 0.0 | 812 |
LLPS-Orgl-0217 | Oryza glumaepatula | 81.13 | 0.0 | 812 |
LLPS-Orni-2219 | Oryza nivara | 80.71 | 0.0 | 808 |
LLPS-Sem-2039 | Selaginella moellendorffii | 75.98 | 0.0 | 748 |
LLPS-Php-2365 | Physcomitrella patens | 67.91 | 0.0 | 660 |