DrLLPS - Data resource of LLPS

LLPS-Art-1530
RPL6B

▼ OVERVIEW


Status:	Reviewed
Protein Name:	60S ribosomal protein L6-2
Gene Name:	RPL6B, At1g74060, F2P9.7
Ensembl Gene:	AT1G74060
Ensembl Protein:	AT1G74060.1
Organism:	Arabidopsis thaliana
Taxa ID:	3702
LLPS Type:	Client

▼ PROPERTY

——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:

Condensate	Description	Tissue/Cell	PMIDs
Nucleolus	"...Here, we describe the first proteomic analysis of plant nucleoli, in which we have identified 217 proteins."	Protoplasts	15496452

▼ CROSS REFERENCE

Database	Nucleotide ID	Protein ID
Ensembl	AT1G74060.1	AT1G74060.1
UniProt		Q9C9C6, RL62_ARATH
GeneBank	BT002588, CP002684, AY062622, AC016662	AEE35544.1, AAL32700.1, AAG52524.1, AAO00948.1
RefSeq	NM_106066.6	NP_177546.1

▼ SEQUENCE

Protein Sequence (FASTA)
1 MPAKQRTAKV NRNPDLIRGV GKYSRSQMYH KRGLWAIKAK NGGVFPRHDA KSKVDAPVEK 60 61 PPKFYPAEDV KKPLPNRRTA KPAKLRASIT PGTVLIILAG RFKGKRVVFL KQLASGLLLV 120 121 TGPFKINGVP LRRVNQAYVI GTSTKVDISG VTLDKFDDKY FGKVAEKKKK KTEGEFFEAE 180 181 KEEKKEIPQG KKDDQKAVDA ALIKAIEAVP ELKTYLGARF SLKQGMKPHE LVF 233
Nucleotide CDS Sequence (FASTA)
1 ATGCCGGCGA AACAGAGGAC AGCTAAGGTC AACAGGAATC CTGATCTGAT CAGGGGAGTT 60 61 GGTAAATACT CAAGGTCTCA GATGTACCAT AAGAGAGGTT TGTGGGCAAT CAAGGCCAAA 120 121 AATGGAGGCG TTTTCCCCCG CCACGACGCT AAATCTAAGG TTGATGCTCC GGTGGAGAAG 180 181 CCACCGAAGT TCTATCCAGC TGAAGACGTG AAGAAACCTC TCCCCAACAG GCGCACGGCA 240 241 AAACCAGCCA AGCTCAGAGC TAGCATCACT CCAGGGACAG TGCTTATCAT CCTTGCTGGT 300 301 AGATTTAAGG GCAAGAGAGT TGTCTTCCTT AAGCAGCTTG CCTCCGGTTT GCTTCTTGTG 360 361 ACTGGACCAT TCAAGATCAA TGGTGTTCCT CTGAGACGTG TTAACCAGGC CTATGTCATT 420 421 GGTACTTCCA CAAAGGTTGA CATTTCTGGA GTTACCCTCG ACAAATTCGA TGATAAGTAC 480 481 TTCGGCAAGG TTGCTGAGAA GAAAAAGAAG AAGACTGAAG GAGAGTTCTT CGAGGCTGAG 540 541 AAAGAGGAGA AGAAAGAGAT TCCACAGGGA AAGAAAGATG ACCAGAAAGC CGTGGACGCA 600 601 GCTTTGATCA AAGCTATTGA AGCAGTTCCA GAGTTGAAGA CTTACCTCGG AGCAAGGTTT 660 661 TCATTGAAAC AAGGAATGAA GCCCCATGAG CTTGTTTTCT AG 702

▼ ANNOTATION

Disorder
IUPred2A

Domain
SMART	LCR-eXXXplorer	CDD	Gene3D

PTM
EPSD	PLMD

Interaction
HINT	Mentha	iRefIndex

Physicochemical
Compute pI/Mw	AAindex

Function
CGDB

Localization
COMPARTMENTS

Expression
ArrayExpress

▼ ORTHOLOGY

DrLLPS ID	Organism	Identity	E-value	Score
LLPS-Arl-0586	Arabidopsis lyrata	97.0	7e-139	396
LLPS-Brn-0175	Brassica napus	91.03	1e-131	378
LLPS-Brr-0554	Brassica rapa	90.6	2e-130	375
LLPS-Bro-0279	Brassica oleracea	89.74	6e-129	371
LLPS-Cus-1422	Cucumis sativus	84.21	7e-117	340
LLPS-Hea-1585	Helianthus annuus	82.52	1e-102	303
LLPS-Prp-2003	Prunus persica	82.4	4e-118	343
LLPS-Mae-1131	Manihot esculenta	81.58	1e-115	337
LLPS-Dac-0372	Daucus carota	81.33	3e-115	336
LLPS-Gor-0313	Gossypium raimondii	81.12	1e-115	337
LLPS-Glm-0914	Glycine max	81.06	1e-114	335
LLPS-Thc-2284	Theobroma cacao	80.69	2e-103	311
LLPS-Coc-1455	Corchorus capsularis	80.52	2e-105	311
LLPS-Met-1060	Medicago truncatula	80.26	6e-116	338
LLPS-Sot-2098	Solanum tuberosum	79.56	1e-106	314
LLPS-Phv-0748	Phaseolus vulgaris	79.31	8e-114	333
LLPS-Viv-0489	Vitis vinifera	79.22	3e-110	323
LLPS-Sol-0455	Solanum lycopersicum	79.11	3e-107	315
LLPS-Pot-0768	Populus trichocarpa	78.79	1e-114	335
LLPS-Nia-0866	Nicotiana attenuata	78.48	8e-99	294
LLPS-Mua-2283	Musa acuminata	77.88	3e-95	284
LLPS-Via-0315	Vigna angularis	76.82	2e-109	321
LLPS-Zem-0127	Zea mays	72.02	5e-92	276
LLPS-Amt-1320	Amborella trichopoda	70.69	2e-99	296
LLPS-Lep-0742	Leersia perrieri	70.64	2e-90	273
LLPS-Sei-1560	Setaria italica	70.18	2e-90	273
LLPS-Sob-0398	Sorghum bicolor	69.72	2e-88	268
LLPS-Orbr-1490	Oryza brachyantha	69.27	9e-81	248
LLPS-Org-1077	Oryza glaberrima	68.81	9e-84	256
LLPS-Orb-0111	Oryza barthii	68.81	9e-84	256
LLPS-Orgl-0493	Oryza glumaepatula	68.35	4e-87	264
LLPS-Ors-1169	Oryza sativa	67.89	1e-86	263
LLPS-Orr-0319	Oryza rufipogon	67.89	1e-86	263
LLPS-Ori-0246	Oryza indica	67.89	1e-86	263
LLPS-Orni-1231	Oryza nivara	67.89	1e-86	263
LLPS-Hov-0224	Hordeum vulgare	67.44	1e-85	262
LLPS-Orm-1259	Oryza meridionalis	67.43	3e-81	249
LLPS-Tra-1640	Triticum aestivum	66.98	2e-86	262
LLPS-Orp-0392	Oryza punctata	66.97	6e-81	248
LLPS-Brd-0790	Brachypodium distachyon	66.51	3e-85	259
LLPS-Tru-0381	Triticum urartu	65.12	1e-81	250
LLPS-Php-0844	Physcomitrella patens	64.0	3e-93	280
LLPS-Tum-1162	Tuber melanosporum	56.91	1e-52	175
LLPS-Cog-0403	Colletotrichum gloeosporioides	56.08	3e-38	136
LLPS-Chr-1125	Chlamydomonas reinhardtii	56.02	2e-64	206
LLPS-Asg-0298	Ashbya gossypii	55.43	8e-52	172
LLPS-Sac-1120	Saccharomyces cerevisiae	55.43	2e-50	169
LLPS-Sem-0295	Selaginella moellendorffii	55.17	6e-52	172
LLPS-Lem-0101	Leptosphaeria maculans	54.19	8e-46	157
LLPS-Usm-0574	Ustilago maydis	53.81	6e-54	180
LLPS-Ast-0693	Aspergillus terreus	53.7	8e-40	141
LLPS-Asn-0015	Aspergillus nidulans	53.07	5e-45	155
LLPS-Mao-0511	Magnaporthe oryzae	53.07	4e-45	155
LLPS-Mel-0440	Melampsora laricipopulina	53.03	2e-54	180
LLPS-Nec-0142	Neurospora crassa	52.54	1e-45	157
LLPS-Gag-1083	Gaeumannomyces graminis	52.51	3e-43	151
LLPS-Map-0766	Magnaporthe poae	52.51	3e-43	151
LLPS-Ere-0267	Erinaceus europaeus	52.25	4e-43	150
LLPS-Chc-0233	Chondrus crispus	52.02	6e-53	177
LLPS-Scs-0199	Sclerotinia sclerotiorum	51.96	4e-49	166
LLPS-Trr-0455	Trichoderma reesei	51.89	2e-45	156
LLPS-Fus-0225	Fusarium solani	51.89	3e-45	156
LLPS-Gas-0080	Galdieria sulphuraria	51.74	1e-46	160
LLPS-Asni-0243	Aspergillus niger	51.4	4e-45	155
LLPS-Asfu-0396	Aspergillus fumigatus	50.84	1e-42	149
LLPS-Fuo-0078	Fusarium oxysporum	50.81	4e-44	153
LLPS-Trv-0265	Trichoderma virens	50.81	1e-44	154
LLPS-Fuv-0680	Fusarium verticillioides	50.81	4e-44	153
LLPS-Yal-1182	Yarrowia lipolytica	50.77	6e-46	157
LLPS-Cogr-0984	Colletotrichum graminicola	50.54	4e-44	153
LLPS-Coo-0909	Colletotrichum orbiculare	50.54	1e-42	149
LLPS-Bot-4842	Bos taurus	50.31	5e-38	137
LLPS-Nef-0837	Neosartorya fischeri	50.28	2e-42	149
LLPS-Beb-0099	Beauveria bassiana	50.27	7e-46	157
LLPS-Dos-0293	Dothistroma septosporum	50.27	2e-41	146
LLPS-Ved-1252	Verticillium dahliae	50.27	3e-44	153
LLPS-Crn-0676	Cryptococcus neoformans	50.0	4e-53	177
LLPS-Zyt-0785	Zymoseptoria tritici	50.0	8e-44	152
LLPS-Phn-0322	Phaeosphaeria nodorum	49.69	5e-42	147
LLPS-Asf-1039	Aspergillus flavus	49.46	2e-44	154
LLPS-Osl-0235	Ostreococcus lucimarinus	49.43	5e-41	144
LLPS-Kop-0541	Komagataella pastoris	49.33	2e-38	137
LLPS-Pytr-0529	Pyrenophora triticirepentis	49.16	1e-46	159
LLPS-Pyt-1376	Pyrenophora teres	49.16	1e-46	159
LLPS-Scj-0718	Schizosaccharomyces japonicus	48.76	1e-41	146
LLPS-Asc-0793	Aspergillus clavatus	48.6	7e-42	147
LLPS-Aso-0424	Aspergillus oryzae	48.39	8e-43	149
LLPS-Eqc-0936	Equus caballus	48.18	1e-52	179
LLPS-Miv-0819	Microbotryum violaceum	48.09	7e-57	187
LLPS-Anp-0525	Anas platyrhynchos	47.92	3e-52	176
LLPS-Cea-2202	Cercocebus atys	47.56	2e-51	174
LLPS-Scc-0765	Schizosaccharomyces cryophilus	47.45	4e-42	147
LLPS-Cym-0860	Cyanidioschyzon merolae	47.4	6e-45	156
LLPS-Blg-1227	Blumeria graminis	47.4	5e-40	142
LLPS-Orc-3222	Oryctolagus cuniculus	47.37	1e-53	181
LLPS-Scp-0376	Schizosaccharomyces pombe	47.24	5e-43	150
LLPS-Mal-1112	Mandrillus leucophaeus	46.75	6e-49	168
LLPS-Myl-3082	Myotis lucifugus	46.58	6e-25	103
LLPS-Urm-1007	Ursus maritimus	46.56	9e-51	173
LLPS-Cap-2308	Cavia porcellus	46.56	6e-51	174
LLPS-Caf-1494	Canis familiaris	46.56	1e-50	173
LLPS-Mup-1588	Mustela putorius furo	46.56	7e-51	173
LLPS-Aim-3257	Ailuropoda melanoleuca	46.56	9e-51	173
LLPS-Abg-1892	Absidia glauca	46.53	7e-58	190
LLPS-Pes-2319	Pelodiscus sinensis	46.37	1e-50	172
LLPS-Icp-3864	Ictalurus punctatus	46.35	4e-42	150
LLPS-Nol-3087	Nomascus leucogenys	46.34	9e-49	168
LLPS-Fec-0582	Felis catus	46.15	2e-52	177
LLPS-Hos-1276	Homo sapiens	46.15	2e-50	172
LLPS-Pat-4147	Pan troglodytes	46.15	2e-50	172
LLPS-Pap-0575	Pan paniscus	46.15	2e-50	172
LLPS-Loa-1093	Loxodonta africana	46.15	5e-51	174
LLPS-Man-1906	Macaca nemestrina	46.15	4e-50	171
LLPS-Rhb-1538	Rhinopithecus bieti	46.15	5e-50	171
LLPS-Poa-1225	Pongo abelii	46.15	2e-50	172
LLPS-Mam-1210	Macaca mulatta	46.15	4e-50	171
LLPS-Cas-1884	Carlito syrichta	46.15	7e-50	171
LLPS-Maf-1200	Macaca fascicularis	46.15	4e-50	171
LLPS-Gog-2686	Gorilla gorilla	46.15	2e-50	172
LLPS-Caj-2040	Callithrix jacchus	46.15	9e-50	171
LLPS-Dio-0236	Dipodomys ordii	46.15	7e-49	168
LLPS-Paa-0886	Papio anubis	46.15	5e-50	171
LLPS-Gaa-1612	Gasterosteus aculeatus	46.03	1e-49	170
LLPS-Sus-0820	Sus scrofa	45.75	2e-52	177
LLPS-Aon-1772	Aotus nancymaae	45.75	5e-50	171
LLPS-Fud-0056	Fukomys damarensis	45.75	2e-50	172
LLPS-Tut-1901	Tursiops truncatus	45.75	1e-51	175
LLPS-Pof-0167	Poecilia formosa	45.74	2e-50	171
LLPS-Gaga-1484	Gallus gallus	45.74	2e-50	172
LLPS-Orn-3317	Oreochromis niloticus	45.71	1e-49	169
LLPS-Pug-0608	Puccinia graminis	45.64	9e-49	169
LLPS-Spr-0009	Sporisorium reilianum	45.61	1e-53	179
LLPS-Fia-2016	Ficedula albicollis	45.56	6e-49	168
LLPS-Tag-0071	Taeniopygia guttata	45.56	4e-49	169
LLPS-Ora-0777	Ornithorhynchus anatinus	45.56	2e-51	175
LLPS-Mum-0522	Mus musculus	45.53	4e-50	172
LLPS-Scm-2238	Scophthalmus maximus	45.38	2e-50	171
LLPS-Tar-1061	Takifugu rubripes	45.38	6e-50	170
LLPS-Meg-1954	Meleagris gallopavo	45.35	9e-50	171
LLPS-Xim-1794	Xiphophorus maculatus	45.35	5e-50	170
LLPS-Ict-0925	Ictidomys tridecemlineatus	45.34	9e-50	171
LLPS-Xet-0491	Xenopus tropicalis	45.31	9e-38	137
LLPS-Mod-1879	Monodelphis domestica	45.2	8e-52	176
LLPS-Ran-3577	Rattus norvegicus	45.14	5e-50	171
LLPS-Asm-1321	Astyanax mexicanus	45.1	2e-47	164
LLPS-Chs-4016	Chlorocebus sabaeus	44.98	2e-42	151
LLPS-Sah-0363	Sarcophilus harrisii	44.94	3e-52	177
LLPS-Cii-1178	Ciona intestinalis	44.86	1e-47	164
LLPS-Otg-2796	Otolemur garnettii	44.53	1e-48	167
LLPS-Dar-1526	Danio rerio	44.44	7e-49	167
LLPS-Put-0519	Puccinia triticina	44.4	7e-49	167
LLPS-Ova-4369	Ovis aries	44.31	3e-51	175
LLPS-Leo-0676	Lepisosteus oculatus	43.95	2e-48	166
LLPS-Anc-2457	Anolis carolinensis	43.48	2e-46	161
LLPS-Scf-1236	Scleropages formosus	43.31	4e-38	139
LLPS-Lac-0114	Latimeria chalumnae	43.3	6e-48	165
LLPS-Drm-0537	Drosophila melanogaster	41.74	2e-37	137
LLPS-Orl-0858	Oryzias latipes	41.26	1e-46	161
LLPS-Cae-1629	Caenorhabditis elegans	40.82	6e-38	137
LLPS-Ten-1193	Tetraodon nigroviridis	37.5	8e-12	64.7

LLPS-Art-1530RPL6B

Protein Sequence

Nucleotide Sequence

LLPS-Art-1530
RPL6B