LLPS-Art-1483
At3g27230

▼ OVERVIEW

Status: Reviewed
Protein Name: At3g27230
Gene Name: At3g27230
Ensembl Gene: AT3G27230
Ensembl Protein: AT3G27230.1
Organism: Arabidopsis thaliana
Taxa ID: 3702
LLPS Type: Others


▼ PROPERTY


——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:
CondensateDescriptionTissue/CellPMIDs
Nucleolus
"...We identified 1602 proteins in the nucleolar and 2544 proteins in the nuclear fraction with an overlap of 1429 proteins."
Arabidopsis thaliana cells26980300

▼ CROSS REFERENCE

▼ SEQUENCE

Protein Sequence (FASTA)
1     MGSVSLKIGD  GTARFRRTSI  CSSAVNLLML  FSVVTTNLFA  LYAFSSHSQA  NSPLLHSSNN  60
61    ISLVSQHLSL  ILREIDSSQR  KLAQMEKQML  GYESIDISRP  NIVPELKLFL  QRHQLPLGKD  120
121   SRTGITEMVS  SVGHSCGKST  DLLSQYMSYK  VFDRCPDDWS  LGQKLILRAC  EPLPRRRCLA  180
181   KTVQKQDLSK  SPDSLWRSVS  NKSVNWSGLG  CKSFDCLKGK  KLSKECVGCF  DLGVEKDRFV  240
241   KVKGKNDFLI  DDVLGLGSGK  IRIGFDISGG  SGTFAARMAE  KNVTVITNTL  NNGAPFSEFI  300
301   AARGLFPLFL  SLDHRFPFLD  NVFDLIHASS  GLDVEGKAEK  LEFLMFDLDR  VLKPRGLFWL  360
361   DNFYCANDEK  KKELTRMIER  FGYKKLKWVI  GEKADAQVYL  SAVLQKPVRA  410
Nucleotide CDS Sequence (FASTA)
1     ATGGGATCTG  TATCTTTAAA  GATCGGCGAT  GGAACAGCCA  GATTCCGACG  AACATCAATT  60
61    TGTTCATCCG  CCGTGAACCT  CCTCATGCTC  TTCTCCGTCG  TCACCACAAA  TCTCTTCGCC  120
121   TTATACGCGT  TCTCCTCTCA  TTCCCAAGCA  AACTCGCCAC  TTCTCCACAG  CTCCAACAAT  180
181   ATCTCACTCG  TTTCTCAACA  TCTCTCTTTG  ATTCTCCGAG  AAATCGATTC  GTCTCAACGC  240
241   AAGCTTGCTC  AGATGGAGAA  ACAGATGCTT  GGTTACGAAT  CTATTGATAT  CTCTCGACCT  300
301   AACATTGTTC  CTGAGCTCAA  ATTGTTCCTC  CAGCGTCATC  AGCTTCCTTT  AGGGAAAGAT  360
361   TCGCGTACCG  GGATCACTGA  AATGGTGTCT  TCCGTTGGAC  ATTCTTGTGG  GAAATCTACG  420
421   GATTTGCTTT  CTCAGTATAT  GTCATATAAG  GTGTTTGATA  GATGTCCTGA  TGATTGGAGT  480
481   CTTGGCCAGA  AGTTGATTCT  TCGTGCTTGT  GAGCCGTTGC  CGCGGAGACG  GTGTTTGGCG  540
541   AAAACGGTGC  AGAAGCAAGA  TTTGAGTAAG  TCTCCTGATT  CGTTATGGAG  ATCTGTTAGT  600
601   AACAAGAGTG  TTAATTGGAG  TGGACTTGGT  TGCAAGAGTT  TTGATTGCTT  GAAAGGTAAG  660
661   AAACTTAGCA  AGGAATGTGT  TGGTTGTTTC  GATTTAGGGG  TTGAGAAAGA  TAGGTTTGTG  720
721   AAGGTTAAGG  GGAAGAATGA  TTTCTTGATT  GATGATGTGT  TGGGTTTAGG  AAGTGGGAAA  780
781   ATTCGAATCG  GGTTCGATAT  TAGCGGTGGA  TCAGGGACTT  TCGCAGCGAG  AATGGCTGAG  840
841   AAGAACGTGA  CTGTAATCAC  TAACACTTTG  AATAATGGTG  CTCCGTTTAG  TGAGTTTATA  900
901   GCTGCGAGAG  GGCTCTTTCC  GTTGTTCTTG  AGCTTAGACC  ATAGATTTCC  TTTTCTTGAC  960
961   AATGTGTTTG  ATCTTATTCA  TGCTTCTAGC  GGATTAGATG  TTGAGGGTAA  AGCGGAGAAG  1020
1021  CTAGAGTTCT  TGATGTTCGA  TCTTGATCGG  GTTTTGAAAC  CCCGTGGATT  GTTCTGGTTG  1080
1081  GATAACTTCT  ATTGTGCTAA  TGATGAGAAG  AAGAAAGAAC  TTACACGTAT  GATTGAGAGG  1140
1141  TTTGGGTATA  AGAAGCTTAA  ATGGGTTATT  GGAGAGAAGG  CTGATGCACA  AGTTTATCTC  1200
1201  TCAGCTGTTC  TGCAAAAGCC  AGTGAGAGCT  TGA  1233

▼ ANNOTATION

Disorder
IUPred2A
Physicochemical
AAindex
Function
CGDB
Localization
COMPARTMENTS

▼ ORTHOLOGY

DrLLPS IDOrganismIdentityE-valueScore
LLPS-Arl-2820Arabidopsis lyrata96.590.0 814
LLPS-Brr-1426Brassica rapa88.590.0 737
LLPS-Bro-1704Brassica oleracea88.540.0 728
LLPS-Brn-1632Brassica napus80.490.0 644
LLPS-Prp-2312Prunus persica76.010.0 657
LLPS-Gor-2345Gossypium raimondii75.420.0 653
LLPS-Cus-2184Cucumis sativus74.820.0 630
LLPS-Thc-2183Theobroma cacao74.760.0 651
LLPS-Pot-0191Populus trichocarpa74.290.0 634
LLPS-Glm-1668Glycine max74.110.0 644
LLPS-Viv-1135Vitis vinifera73.920.0 644
LLPS-Vir-2211Vigna radiata73.570.0 634
LLPS-Via-1576Vigna angularis73.330.0 634
LLPS-Phv-2049Phaseolus vulgaris73.10.0 633
LLPS-Met-1862Medicago truncatula72.770.0 625
LLPS-Mae-0621Manihot esculenta72.550.0 638
LLPS-Hea-1430Helianthus annuus71.330.0 620
LLPS-Nia-2290Nicotiana attenuata70.240.0 607
LLPS-Dac-2112Daucus carota70.190.0 607
LLPS-Sol-1415Solanum lycopersicum68.410.0 579
LLPS-Sot-0999Solanum tuberosum68.090.0 587
LLPS-Coc-1462Corchorus capsularis66.670.0 550
LLPS-Amt-0400Amborella trichopoda54.512e-88 276
LLPS-Mua-1690Musa acuminata53.859e-156 454
LLPS-Sob-2322Sorghum bicolor46.064e-89 282
LLPS-Sem-1347Selaginella moellendorffii43.147e-105 323
LLPS-Ori-1657Oryza indica42.192e-86 275
LLPS-Orr-0961Oryza rufipogon42.199e-71 230
LLPS-Ors-1911Oryza sativa42.192e-86 275
LLPS-Sei-1420Setaria italica42.177e-89 281
LLPS-Org-0606Oryza glaberrima41.994e-85 271
LLPS-Orni-2386Oryza nivara41.925e-86 274
LLPS-Zem-0796Zea mays41.697e-89 281
LLPS-Orgl-0618Oryza glumaepatula41.24e-90 284
LLPS-Tra-0493Triticum aestivum41.057e-84 268
LLPS-Orp-2370Oryza punctata40.649e-91 286
LLPS-Orm-1467Oryza meridionalis40.11e-85 272
LLPS-Orbr-1647Oryza brachyantha38.373e-80 259