LLPS-Art-0940
RPS4A

▼ OVERVIEW

Status: Reviewed
Protein Name: 40S ribosomal protein S4-1
Gene Name: RPS4A, At2g17360, F5J6.12
Ensembl Gene: AT2G17360
Ensembl Protein: AT2G17360.1
Organism: Arabidopsis thaliana
Taxa ID: 3702
LLPS Type: Others


▼ PROPERTY


——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:
CondensateDescriptionTissue/CellPMIDs
Nucleolus
"...Comparative analysis revealed that 562 proteins were consistently identified in both experimental data sets."
3 weeks-old Arabidopsis thaliana plants29104584
Nucleolus
"...We identified 1602 proteins in the nucleolar and 2544 proteins in the nuclear fraction with an overlap of 1429 proteins."
Arabidopsis thaliana cells26980300

▼ SEQUENCE

Protein Sequence (FASTA)
1     MARGLKKHLK  RLNAPKHWML  DKLGGAFAPK  PSSGPHKSRE  CLPLVLIIRN  RLKYALTYRE  60
61    VISILMQRHI  QVDGKVRTDK  TYPAGFMDVV  SIPKTNENFR  LLYDTKGRFR  LHSIKDEEAK  120
121   FKLCKVRSIQ  FGQKGIPYLN  TYDGRTIRYP  DPLIKPNDTI  KLDLEENKIV  EFIKFDVGNV  180
181   VMVTGGRNRG  RVGVIKNREK  HKGSFETIHI  QDSTGHEFAT  RLGNVYTIGK  GTKPWVSLPK  240
241   GKGIKLTIIE  EARKRLSAQQ  A  261
Nucleotide CDS Sequence (FASTA)
1     ATGGCAAGAG  GTTTGAAGAA  GCATTTGAAG  AGGCTCAATG  CTCCTAAGCA  TTGGATGCTT  60
61    GATAAACTTG  GTGGTGCCTT  TGCCCCCAAG  CCGTCTTCTG  GGCCACACAA  GTCTAGGGAG  120
121   TGTTTACCCT  TGGTCCTTAT  CATCAGGAAC  AGGTTGAAGT  ATGCTCTGAC  ATACAGAGAA  180
181   GTGATTTCGA  TCTTGATGCA  AAGGCATATT  CAGGTTGATG  GGAAAGTGAG  GACTGACAAG  240
241   ACTTACCCTG  CTGGTTTCAT  GGATGTTGTG  TCTATCCCCA  AAACAAATGA  GAACTTCCGT  300
301   CTTTTGTATG  ACACCAAGGG  ACGTTTCCGT  CTCCACTCCA  TCAAGGATGA  GGAGGCTAAG  360
361   TTCAAGCTTT  GCAAAGTGAG  ATCGATCCAA  TTTGGTCAGA  AGGGTATTCC  CTACTTGAAC  420
421   ACATATGATG  GTCGCACCAT  CCGTTATCCT  GACCCGCTCA  TCAAGCCTAA  CGACACCATC  480
481   AAGCTCGACC  TTGAGGAGAA  CAAGATTGTG  GAGTTCATTA  AGTTTGATGT  GGGCAACGTA  540
541   GTTATGGTCA  CTGGAGGAAG  AAACAGAGGG  CGTGTTGGTG  TGATTAAGAA  CCGTGAGAAA  600
601   CACAAGGGTA  GCTTTGAAAC  CATCCACATT  CAAGACTCAA  CAGGACATGA  GTTTGCAACA  660
661   AGGTTGGGAA  ATGTGTACAC  AATCGGTAAG  GGAACAAAGC  CATGGGTGTC  CCTTCCAAAG  720
721   GGTAAAGGTA  TTAAGTTGAC  CATCATTGAG  GAAGCCAGGA  AGAGACTTTC  TGCTCAACAA  780
781   GCTTGA  786

▼ ANNOTATION

Disorder
IUPred2A
PTM
EPSD
Physicochemical
Compute pI/MwAAindex
Function
PIRSF
Localization
COMPARTMENTS
Expression
ArrayExpress

▼ ORTHOLOGY

DrLLPS IDOrganismIdentityE-valueScore
LLPS-Arl-1799Arabidopsis lyrata99.233e-175 491
LLPS-Brr-0558Brassica rapa97.71e-172 484
LLPS-Brn-0065Brassica napus97.322e-172 485
LLPS-Bro-2300Brassica oleracea96.556e-172 483
LLPS-Mua-1147Musa acuminata93.752e-165 468
LLPS-Cus-0122Cucumis sativus93.18e-167 469
LLPS-Sol-1448Solanum lycopersicum93.16e-167 470
LLPS-Phv-0908Phaseolus vulgaris93.16e-168 472
LLPS-Vir-0488Vigna radiata92.724e-168 473
LLPS-Prp-1183Prunus persica92.343e-166 468
LLPS-Mae-1696Manihot esculenta92.341e-165 467
LLPS-Via-0958Vigna angularis92.311e-166 469
LLPS-Coc-0757Corchorus capsularis92.314e-140 423
LLPS-Thc-0406Theobroma cacao91.951e-164 464
LLPS-Nia-2386Nicotiana attenuata91.953e-165 466
LLPS-Glm-1985Glycine max91.922e-165 466
LLPS-Pot-1958Populus trichocarpa91.574e-165 465
LLPS-Viv-0889Vitis vinifera91.542e-163 462
LLPS-Dac-1700Daucus carota91.374e-161 455
LLPS-Met-2251Medicago truncatula91.195e-165 465
LLPS-Gor-0027Gossypium raimondii91.197e-164 462
LLPS-Zem-0791Zea mays90.983e-159 451
LLPS-Lep-1870Leersia perrieri90.593e-158 448
LLPS-Orgl-1719Oryza glumaepatula90.593e-158 447
LLPS-Ori-0182Oryza indica90.593e-158 447
LLPS-Orni-0817Oryza nivara90.593e-158 447
LLPS-Orr-2008Oryza rufipogon90.593e-158 447
LLPS-Orm-1079Oryza meridionalis90.593e-158 447
LLPS-Ors-0783Oryza sativa90.593e-158 447
LLPS-Orbr-0605Oryza brachyantha90.592e-158 448
LLPS-Amt-1871Amborella trichopoda90.556e-157 445
LLPS-Sei-0213Setaria italica90.23e-157 445
LLPS-Orb-1464Oryza barthii90.23e-158 448
LLPS-Org-0919Oryza glaberrima90.23e-157 445
LLPS-Hov-0500Hordeum vulgare89.83e-158 447
LLPS-Tra-0279Triticum aestivum89.83e-158 447
LLPS-Tru-0702Triticum urartu89.83e-158 447
LLPS-Orp-0372Oryza punctata89.82e-157 446
LLPS-Sob-0209Sorghum bicolor89.85e-158 447
LLPS-Sot-1564Solanum tuberosum89.661e-162 459
LLPS-Hea-1503Helianthus annuus89.665e-163 460
LLPS-Brd-1183Brachypodium distachyon88.637e-156 442
LLPS-Php-2054Physcomitrella patens79.228e-142 406
LLPS-Sem-0701Selaginella moellendorffii77.917e-138 396
LLPS-Abg-0273Absidia glauca71.372e-120 352
LLPS-Scm-1208Scophthalmus maximus70.316e-120 353
LLPS-Dio-0373Dipodomys ordii70.112e-123 359
LLPS-Scf-2941Scleropages formosus70.116e-123 358
LLPS-Bot-4364Bos taurus70.112e-123 359
LLPS-Mal-0310Mandrillus leucophaeus70.112e-123 359
LLPS-Ova-1198Ovis aries70.112e-123 359
LLPS-Ran-3986Rattus norvegicus70.112e-123 359
LLPS-Orl-0739Oryzias latipes70.112e-123 359
LLPS-Sus-3193Sus scrofa70.112e-123 359
LLPS-Cea-1803Cercocebus atys70.112e-123 359
LLPS-Mum-1253Mus musculus70.112e-123 359
LLPS-Maf-2570Macaca fascicularis70.112e-123 359
LLPS-Mea-3377Mesocricetus auratus70.112e-123 359
LLPS-Gog-0075Gorilla gorilla70.112e-123 359
LLPS-Caf-1910Canis familiaris70.112e-123 359
LLPS-Eqc-0444Equus caballus70.112e-123 359
LLPS-Nol-3475Nomascus leucogenys70.112e-123 359
LLPS-Cas-1846Carlito syrichta70.112e-123 359
LLPS-Hos-0951Homo sapiens70.112e-123 359
LLPS-Pap-2133Pan paniscus70.112e-123 359
LLPS-Urm-2852Ursus maritimus70.112e-123 359
LLPS-Pat-4371Pan troglodytes70.112e-123 359
LLPS-Fec-2962Felis catus70.112e-123 359
LLPS-Rhb-4296Rhinopithecus bieti70.112e-123 359
LLPS-Gaa-2888Gasterosteus aculeatus70.05e-123 358
LLPS-Chs-4272Chlorocebus sabaeus70.02e-122 357
LLPS-Loa-0633Loxodonta africana70.03e-122 357
LLPS-Otg-4005Otolemur garnettii70.02e-122 357
LLPS-Paa-2671Papio anubis69.734e-123 358
LLPS-Myl-0493Myotis lucifugus69.732e-123 359
LLPS-Leo-0123Lepisosteus oculatus69.731e-122 357
LLPS-Fud-2638Fukomys damarensis69.736e-123 358
LLPS-Poa-1867Pongo abelii69.732e-122 357
LLPS-Cap-2052Cavia porcellus69.737e-123 358
LLPS-Gaga-2700Gallus gallus69.738e-123 358
LLPS-Dar-2275Danio rerio69.735e-123 358
LLPS-Orn-1823Oreochromis niloticus69.732e-123 359
LLPS-Aim-3398Ailuropoda melanoleuca69.628e-121 353
LLPS-Mup-3659Mustela putorius furo69.624e-121 353
LLPS-Aon-0285Aotus nancymaae69.621e-121 355
LLPS-Anc-0848Anolis carolinensis69.622e-121 354
LLPS-Cii-0321Ciona intestinalis69.614e-45 153
LLPS-Chr-0363Chlamydomonas reinhardtii69.354e-120 351
LLPS-Sah-0230Sarcophilus harrisii69.355e-122 356
LLPS-Caj-2839Callithrix jacchus69.358e-122 355
LLPS-Icp-2574Ictalurus punctatus69.352e-123 359
LLPS-Xet-0824Xenopus tropicalis69.354e-122 356
LLPS-Meg-1257Meleagris gallopavo69.351e-121 355
LLPS-Fia-1528Ficedula albicollis69.353e-122 356
LLPS-Tag-1649Taeniopygia guttata69.33e-103 307
LLPS-Anp-1018Anas platyrhynchos69.231e-99 298
LLPS-Mod-0665Monodelphis domestica69.235e-121 353
LLPS-Mam-3183Macaca mulatta69.085e-120 352
LLPS-Orc-0994Oryctolagus cuniculus68.972e-121 354
LLPS-Osl-0258Ostreococcus lucimarinus68.924e-118 345
LLPS-Tar-1921Takifugu rubripes68.859e-122 355
LLPS-Pes-0235Pelodiscus sinensis68.727e-111 327
LLPS-Scc-0082Schizosaccharomyces cryophilus68.634e-116 340
LLPS-Xim-0422Xiphophorus maculatus68.585e-121 353
LLPS-Asm-2782Astyanax mexicanus68.582e-123 359
LLPS-Pof-0880Poecilia formosa68.585e-121 353
LLPS-Lac-2657Latimeria chalumnae68.581e-121 355
LLPS-Ora-3001Ornithorhynchus anatinus68.381e-105 313
LLPS-Scp-1318Schizosaccharomyces pombe67.843e-115 338
LLPS-Ict-1066Ictidomys tridecemlineatus67.698e-121 352
LLPS-Ten-3532Tetraodon nigroviridis67.437e-121 353
LLPS-Man-2407Macaca nemestrina67.311e-113 334
LLPS-Aso-0907Aspergillus oryzae67.127e-68 213
LLPS-Kop-0545Komagataella pastoris66.86e-113 333
LLPS-Lem-0211Leptosphaeria maculans66.671e-32 120
LLPS-Scj-0233Schizosaccharomyces japonicus66.672e-116 341
LLPS-Fus-0909Fusarium solani66.671e-112 332
LLPS-Fuv-0099Fusarium verticillioides66.272e-112 331
LLPS-Fuo-0581Fusarium oxysporum66.272e-112 331
LLPS-Trr-1130Trichoderma reesei66.279e-111 327
LLPS-Gas-0302Galdieria sulphuraria66.152e-115 339
LLPS-Drm-0648Drosophila melanogaster66.025e-115 338
LLPS-Pyt-0411Pyrenophora teres65.889e-107 317
LLPS-Pytr-0545Pyrenophora triticirepentis65.889e-107 317
LLPS-Trv-0719Trichoderma virens65.887e-111 327
LLPS-Beb-1110Beauveria bassiana65.884e-113 333
LLPS-Asg-0053Ashbya gossypii65.521e-113 334
LLPS-Asc-1301Aspergillus clavatus65.491e-108 322
LLPS-Crn-1044Cryptococcus neoformans65.323e-102 305
LLPS-Mao-0936Magnaporthe oryzae65.251e-109 324
LLPS-Cog-1014Colletotrichum gloeosporioides65.252e-109 324
LLPS-Sac-0992Saccharomyces cerevisiae65.137e-113 332
LLPS-Phn-0128Phaeosphaeria nodorum65.19e-107 317
LLPS-Miv-0425Microbotryum violaceum65.11e-104 337
LLPS-Yal-0809Yarrowia lipolytica65.02e-111 329
LLPS-Blg-1434Blumeria graminis64.714e-109 323
LLPS-Dos-1466Dothistroma septosporum64.717e-108 320
LLPS-Nec-1244Neurospora crassa64.372e-111 329
LLPS-Cogr-0970Colletotrichum graminicola64.371e-110 327
LLPS-Scs-0593Sclerotinia sclerotiorum64.314e-109 323
LLPS-Gag-1254Gaeumannomyces graminis64.313e-109 323
LLPS-Cym-0094Cyanidioschyzon merolae64.311e-111 329
LLPS-Asfu-0705Aspergillus fumigatus64.313e-108 320
LLPS-Nef-0406Neosartorya fischeri64.311e-107 319
LLPS-Tum-1401Tuber melanosporum64.291e-107 322
LLPS-Map-0917Magnaporthe poae63.921e-108 322
LLPS-Ved-0935Verticillium dahliae63.922e-109 324
LLPS-Asf-1418Aspergillus flavus63.712e-104 311
LLPS-Zyt-0571Zymoseptoria tritici63.711e-105 314
LLPS-Coo-0752Colletotrichum orbiculare63.63e-109 323
LLPS-Asn-0147Aspergillus nidulans63.534e-107 318
LLPS-Chc-0395Chondrus crispus62.936e-105 312
LLPS-Asni-1482Aspergillus niger62.935e-108 320
LLPS-Ast-0553Aspergillus terreus62.664e-94 284
LLPS-Cis-0389Ciona savignyi62.552e-107 318
LLPS-Mel-0480Melampsora laricipopulina61.24e-99 298
LLPS-Spr-1469Sporisorium reilianum60.543e-104 310
LLPS-Cae-0528Caenorhabditis elegans60.472e-97 293
LLPS-Pug-0385Puccinia graminis59.842e-96 290
LLPS-Usm-0514Ustilago maydis59.775e-103 308
LLPS-Put-0359Puccinia triticina54.736e-79 245