LLPS-Art-0930
CHR24

▼ OVERVIEW


Status: Reviewed
Protein Name: Protein CHROMATIN REMODELING 24
Gene Name: CHR24, At5g63950, MBM17.5
Ensembl Gene: AT5G63950
Ensembl Protein: AT5G63950.2
Organism: Arabidopsis thaliana
Taxa ID: 3702
LLPS Type: Client


▼ PROPERTY



——— Disorder propensity (calculated by IUPred2A)

▼ Classification


Condensates:
CondensateDescriptionTissue/CellPMIDs
Nucleolus
"...We identified 1602 proteins in the nucleolar and 2544 proteins in the nuclear fraction with an overlap of 1429 proteins."
Arabidopsis thaliana cells26980300

▼ FUNCTION


DNA helicase that acts as an essential component of the spindle assembly checkpoint (By similarity). Probable chromatin remodeling factor that regulate homologous recombination (HR) and non-homologous recombination (NHR).

▼ SEQUENCE


Protein Sequence (FASTA)
1     MAENTASHRR  KPRSLNDRHY  SILQDLSAPP  RQPPSSSHGE  DEETKKSMIK  LAGRRRLCKA  60
61    LPKEDEADGY  DDPDLVDFYS  PVKGETSLDS  AGIGNKFTSW  DESKEANTEL  AGEPNFSIIT  120
121   DFCSPSPQLK  QKEEMQGDGG  RNEIMGILDD  LTSKLGTMSI  QKKKDSQSND  FDACGVKSQV  180
181   DKFDFEDAKS  SFSLLSDLSK  SSPDVVTTYN  AGVNSIKDKQ  GKSGFAIREE  QTSKEFSREW  240
241   EERISNVGKQ  NSYSGRHFDD  NSEDNRQGYN  LDRGKSQCKE  VDQSMKTTRH  IEVSEKIRTV  300
301   GRSNAAKLRD  LDEDDDDDDC  LILSGKKAAE  MKINKPARSY  NAKRHGYDER  SLEDEGSITL  360
361   TGLNLSYTLP  GKIATMLYPH  QREGLNWLWS  LHTQGKGGIL  GDDMGLGKTM  QICSFLAGLF  420
421   HSKLIKRALV  VAPKTLLPHW  MKELATVGLS  QMTREYYGTS  TKAREYDLHH  ILQGKGILLT  480
481   TYDIVRNNTK  ALQGDDHYTD  EDDEDGNKWD  YMILDEGHLI  KNPNTQRAKS  LLEIPSSHRI  540
541   IISGTPIQNN  LKELWALFNF  SCPGLLGDKN  WFKQNYEHYI  LRGTDKNATD  REQRIGSTVA  600
601   KNLREHIQPF  FLRRLKSEVF  GDDGATSKLS  KKDEIVVWLR  LTACQRQLYE  AFLNSEIVLS  660
661   AFDGSPLAAL  TILKKICDHP  LLLTKRAAED  VLEGMDSTLT  QEEAGVAERL  AMHIADNVDT  720
721   DDFQTKNDSI  SCKLSFIMSL  LENLIPEGHR  VLIFSQTRKM  LNLIQDSLTS  NGYSFLRIDG  780
781   TTKAPDRLKT  VEEFQEGHVA  PIFLLTSQVG  GLGLTLTKAD  RVIVVDPAWN  PSTDNQSVDR  840
841   AYRIGQTKDV  IVYRLMTSAT  VEEKIYRKQV  YKGGLFKTAT  EHKEQIRYFS  QQDLRELFSL  900
901   PKGGFDVSPT  QQQLYEEHYN  QIKLDEKLES  HVKFLETLGI  AGVSHHSLLF  SKTAPIQAIQ  960
961   KDEEEQIRRE  TALLLGRASA  SISQDTVING  ADYAFKPKDV  NLDKRINISP  VDDKELSESV  1020
1021  IKARLNRLTM  LLQNKGTVSR  LPDGGAKIQK  QIAELTRELK  DMKAAERINM  PQVIDLEEDI  1080
1081  SRKMQKGLNL  1090
Nucleotide CDS Sequence (FASTA)
1     ATGGCGGAAA  ATACGGCCAG  CCATAGAAGA  AAACCTCGGA  GCTTGAACGA  TCGTCACTAC  60
61    AGTATCCTCC  AGGATCTTTC  TGCGCCTCCT  AGACAGCCTC  CCTCTTCTTC  TCATGGAGAA  120
121   GATGAAGAGA  CGAAGAAGTC  CATGATTAAG  CTTGCTGGAC  GACGTCGTCT  TTGCAAGGCC  180
181   TTGCCAAAGG  AAGACGAAGC  TGATGGATAT  GACGATCCTG  ATTTGGTTGA  TTTCTATTCC  240
241   CCAGTTAAAG  GAGAGACATC  ACTAGACAGC  GCTGGAATTG  GGAACAAATT  CACATCTTGG  300
301   GATGAATCAA  AGGAAGCTAA  CACTGAGCTG  GCTGGCGAGC  CTAACTTTTC  GATAATCACA  360
361   GACTTTTGTT  CGCCCTCACC  TCAGTTGAAG  CAAAAAGAGG  AAATGCAAGG  TGATGGAGGA  420
421   AGGAACGAGA  TCATGGGTAT  TTTGGATGAT  TTGACCTCTA  AGCTTGGGAC  AATGTCGATT  480
481   CAGAAGAAGA  AGGATAGCCA  AAGCAATGAT  TTTGATGCAT  GTGGAGTGAA  GAGCCAGGTT  540
541   GATAAATTTG  ATTTTGAGGA  TGCCAAATCC  TCATTTTCCT  TGCTATCGGA  TCTATCTAAG  600
601   TCCTCACCAG  ATGTGGTTAC  CACATATAAT  GCTGGCGTTA  ATAGTATCAA  GGACAAGCAA  660
661   GGCAAATCTG  GTTTTGCCAT  CCGGGAAGAG  CAAACTAGTA  AGGAATTTTC  AAGGGAATGG  720
721   GAAGAAAGAA  TTTCGAATGT  TGGAAAGCAA  AACTCATATT  CTGGTCGGCA  CTTTGACGAT  780
781   AACTCTGAAG  ATAATAGGCA  GGGATACAAT  CTTGACCGTG  GGAAGAGCCA  ATGCAAGGAA  840
841   GTCGACCAAA  GTATGAAGAC  GACCAGGCAC  ATAGAGGTAA  GTGAGAAGAT  AAGAACAGTC  900
901   GGAAGGTCTA  ATGCTGCCAA  GCTAAGAGAC  TTAGACGAGG  ATGATGATGA  TGATGACTGT  960
961   CTCATTTTGT  CCGGGAAAAA  GGCGGCTGAA  ATGAAAATTA  ATAAGCCAGC  TCGGTCTTAT  1020
1021  AACGCCAAAA  GACATGGTTA  TGATGAGAGA  TCGTTGGAAG  ATGAAGGGTC  TATCACTTTA  1080
1081  ACTGGCCTCA  ATTTGTCTTA  CACATTGCCT  GGAAAGATTG  CAACAATGTT  ATATCCACAT  1140
1141  CAGAGGGAAG  GGTTGAATTG  GCTTTGGTCA  TTGCATACCC  AAGGGAAAGG  TGGAATACTT  1200
1201  GGAGATGATA  TGGGTTTAGG  TAAAACTATG  CAGATTTGTA  GTTTTCTTGC  TGGTTTATTC  1260
1261  CACTCCAAAT  TGATCAAGCG  TGCTCTGGTA  GTGGCCCCAA  AAACCTTGCT  GCCTCACTGG  1320
1321  ATGAAAGAAT  TAGCTACCGT  GGGACTTTCA  CAAATGACTA  GGGAATACTA  CGGTACTTCT  1380
1381  ACGAAAGCCC  GGGAATATGA  TCTCCACCAC  ATTCTGCAGG  GTAAAGGTAT  TCTTCTAACA  1440
1441  ACCTATGATA  TTGTGCGGAA  CAATACAAAG  GCTTTGCAAG  GTGACGACCA  TTATACTGAT  1500
1501  GAGGATGATG  AAGATGGAAA  CAAATGGGAC  TACATGATTC  TGGACGAGGG  ACATCTTATT  1560
1561  AAGAACCCCA  ACACACAAAG  GGCGAAGAGT  TTGCTTGAGA  TCCCAAGTTC  TCACCGTATT  1620
1621  ATAATAAGTG  GTACACCAAT  CCAGAACAAT  CTCAAGGAAC  TGTGGGCTCT  CTTCAACTTC  1680
1681  AGCTGCCCTG  GGTTACTCGG  TGACAAGAAT  TGGTTTAAGC  AGAATTATGA  GCATTACATT  1740
1741  CTTCGTGGAA  CTGACAAAAA  TGCTACTGAT  AGAGAACAGA  GGATAGGCTC  AACAGTAGCA  1800
1801  AAGAACTTGA  GGGAGCATAT  TCAACCTTTC  TTCTTGCGGC  GCCTTAAGAG  TGAAGTCTTC  1860
1861  GGTGATGATG  GTGCAACCTC  CAAACTTTCG  AAGAAGGACG  AAATTGTTGT  ATGGTTACGG  1920
1921  TTAACAGCTT  GCCAGAGGCA  ATTATATGAA  GCTTTCTTAA  ACAGTGAAAT  TGTTCTGTCA  1980
1981  GCTTTTGATG  GTTCACCTCT  AGCAGCTCTA  ACGATTCTGA  AGAAAATATG  TGACCACCCG  2040
2041  CTTCTCTTAA  CTAAGAGGGC  TGCTGAGGAT  GTCCTTGAAG  GAATGGATTC  AACATTAACA  2100
2101  CAAGAAGAAG  CAGGCGTGGC  TGAGAGATTG  GCTATGCATA  TAGCGGACAA  TGTGGATACA  2160
2161  GATGATTTTC  AGACCAAGAA  TGACAGTATC  TCTTGCAAAT  TGTCATTTAT  CATGTCGCTA  2220
2221  CTGGAAAATT  TAATTCCAGA  GGGGCACCGT  GTTCTAATCT  TCTCCCAGAC  ACGCAAGATG  2280
2281  CTTAATCTCA  TTCAGGATTC  TCTTACCTCC  AACGGTTATA  GTTTCTTGCG  AATTGATGGT  2340
2341  ACAACAAAAG  CCCCTGACAG  ATTGAAGACT  GTTGAAGAAT  TTCAAGAAGG  TCATGTGGCT  2400
2401  CCTATATTTC  TCTTGACTTC  TCAAGTTGGT  GGTCTCGGCC  TTACTCTGAC  TAAGGCAGAC  2460
2461  CGTGTGATTG  TGGTGGACCC  TGCCTGGAAT  CCAAGCACGG  ACAACCAGAG  TGTTGATCGA  2520
2521  GCATATAGAA  TTGGGCAGAC  AAAGGATGTC  ATCGTATATA  GGTTAATGAC  CTCAGCAACT  2580
2581  GTTGAAGAAA  AGATATACAG  AAAGCAGGTA  TACAAGGGAG  GATTGTTTAA  AACTGCAACT  2640
2641  GAGCATAAAG  AACAAATCCG  CTACTTCAGC  CAGCAGGACC  TTCGAGAACT  TTTTAGTCTT  2700
2701  CCCAAGGGAG  GCTTTGATGT  TTCACCTACA  CAACAGCAAC  TATACGAAGA  GCACTATAAC  2760
2761  CAAATCAAAC  TAGATGAAAA  ACTGGAATCC  CATGTAAAGT  TTCTCGAAAC  CCTTGGTATA  2820
2821  GCTGGAGTTA  GCCACCATAG  CTTACTTTTC  TCCAAGACAG  CTCCTATTCA  AGCGATACAG  2880
2881  AAAGATGAAG  AAGAACAAAT  AAGGAGAGAA  ACAGCATTGC  TCTTGGGACG  CGCATCAGCA  2940
2941  AGTATTTCAC  AAGACACCGT  CATCAATGGG  GCTGACTATG  CTTTCAAGCC  AAAGGATGTG  3000
3001  AATTTGGACA  AGAGAATCAA  CATTTCCCCA  GTCGATGACA  AGGAATTGTC  AGAAAGCGTA  3060
3061  ATTAAAGCAA  GACTCAATCG  TTTGACGATG  CTATTACAAA  ACAAGGGTAC  GGTCTCAAGG  3120
3121  CTACCTGATG  GAGGGGCAAA  AATCCAGAAG  CAGATTGCTG  AATTGACTCG  AGAACTGAAA  3180
3181  GACATGAAAG  CAGCAGAAAG  GATCAACATG  CCTCAAGTTA  TTGACTTGGA  GGAGGATATA  3240
3241  AGTCGGAAGA  TGCAAAAAGG  ATTGAATCTG  TAG  3273

▼ KEYWORD


ID
Family
ATP-binding
Coiled coil
Complete proteome
DNA recombination
DNA-binding
Helicase
Hydrolase
Nucleotide-binding
Nucleus
Reference proteome

▼ GENE ONTOLOGY


ID
Classification
Description
Cellular Component
Nucleus
Molecular Function
ATP binding
Molecular Function
DNA binding
Molecular Function
Helicase activity
Biological Process
DNA recombination
Biological Process
Positive regulation of mitotic recombination
Biological Process
Response to cadmium ion

▼ KEGG



▼ ANNOTATION


Disorder
IUPred2A
Physicochemical
Compute pI/MwAAindex
Localization
COMPARTMENTS

▼ ORTHOLOGY


DrLLPS IDOrganismIdentityE-valueScore
LLPS-Arl-0338Arabidopsis lyrata93.080.02004
LLPS-Brr-2692Brassica rapa88.10.0 741
LLPS-Bro-0479Brassica oleracea79.490.01674
LLPS-Vir-0692Vigna radiata75.880.0 764
LLPS-Brn-2408Brassica napus73.850.01607
LLPS-Thc-1564Theobroma cacao73.070.01094
LLPS-Phv-0959Phaseolus vulgaris70.810.01036
LLPS-Glm-1968Glycine max70.140.01029
LLPS-Via-1492Vigna angularis69.460.01028
LLPS-Met-0590Medicago truncatula68.780.01015
LLPS-Viv-1158Vitis vinifera67.250.01062
LLPS-Hea-0724Helianthus annuus66.620.01035
LLPS-Sol-1820Solanum lycopersicum65.890.01027
LLPS-Orm-0847Oryza meridionalis64.730.0 840
LLPS-Lep-2064Leersia perrieri63.410.0 872
LLPS-Orr-0818Oryza rufipogon62.890.0 881
LLPS-Orb-0055Oryza barthii62.750.0 884
LLPS-Mua-2178Musa acuminata62.70.0 910
LLPS-Orni-0749Oryza nivara62.287e-75 275
LLPS-Tra-1074Triticum aestivum62.180.0 883
LLPS-Sei-0159Setaria italica62.170.0 900
LLPS-Ors-1746Oryza sativa61.580.0 882
LLPS-Ori-0985Oryza indica61.440.0 884
LLPS-Sob-1411Sorghum bicolor61.390.0 884
LLPS-Brd-1352Brachypodium distachyon61.080.0 895
LLPS-Orp-0504Oryza punctata60.660.0 871
LLPS-Tru-1888Triticum urartu59.830.0 832
LLPS-Pot-0749Populus trichocarpa59.220.01174
LLPS-Coc-1299Corchorus capsularis58.510.01143
LLPS-Orgl-1776Oryza glumaepatula58.450.0 792
LLPS-Amt-0357Amborella trichopoda58.40.0 853
LLPS-Zem-0829Zea mays57.750.0 832
LLPS-Mae-1143Manihot esculenta57.350.01110
LLPS-Gor-1473Gossypium raimondii57.030.01129
LLPS-Prp-0388Prunus persica56.670.01109
LLPS-Cus-0055Cucumis sativus55.870.01059
LLPS-Nia-1232Nicotiana attenuata55.660.01061
LLPS-Orbr-2237Oryza brachyantha54.66e-110 358
LLPS-Dac-1598Daucus carota54.420.0 986
LLPS-Php-0593Physcomitrella patens53.430.0 766
LLPS-Abg-0157Absidia glauca45.571e-1587.0
LLPS-Mea-3958Mesocricetus auratus43.194e-149 485
LLPS-Sah-3020Sarcophilus harrisii42.868e-146 472
LLPS-Ran-0749Rattus norvegicus42.66e-144 471
LLPS-Dar-3013Danio rerio42.431e-141 469
LLPS-Mum-3811Mus musculus42.332e-144 472
LLPS-Xet-2029Xenopus tropicalis42.334e-143 468
LLPS-Mod-1504Monodelphis domestica42.331e-139 457
LLPS-Myl-3452Myotis lucifugus42.177e-138 454
LLPS-Leo-1827Lepisosteus oculatus42.141e-151 491
LLPS-Otg-2956Otolemur garnettii42.071e-137 454
LLPS-Ova-0577Ovis aries42.053e-141 463
LLPS-Caj-0583Callithrix jacchus42.056e-140 460
LLPS-Ora-0640Ornithorhynchus anatinus41.987e-140 459
LLPS-Bot-1998Bos taurus41.892e-140 462
LLPS-Aon-4479Aotus nancymaae41.863e-139 459
LLPS-Gog-1919Gorilla gorilla41.793e-139 458
LLPS-Poa-3320Pongo abelii41.792e-139 459
LLPS-Maf-1621Macaca fascicularis41.766e-138 455
LLPS-Pof-2559Poecilia formosa41.751e-135 448
LLPS-Scf-1724Scleropages formosus41.746e-141 466
LLPS-Icp-2005Ictalurus punctatus41.713e-142 467
LLPS-Hos-2651Homo sapiens41.653e-139 459
LLPS-Pat-1605Pan troglodytes41.653e-139 459
LLPS-Pap-3518Pan paniscus41.653e-139 459
LLPS-Anp-0788Anas platyrhynchos41.545e-147 478
LLPS-Eqc-0945Equus caballus41.52e-141 464
LLPS-Meg-2143Meleagris gallopavo41.486e-138 454
LLPS-Paa-1224Papio anubis41.463e-138 456
LLPS-Mal-0288Mandrillus leucophaeus41.464e-138 456
LLPS-Tut-1660Tursiops truncatus41.467e-137 452
LLPS-Nol-1961Nomascus leucogenys41.463e-138 456
LLPS-Mam-0189Macaca mulatta41.462e-138 456
LLPS-Rhb-1028Rhinopithecus bieti41.461e-138 456
LLPS-Caf-2232Canis familiaris41.435e-136 450
LLPS-Fud-2388Fukomys damarensis41.421e-139 459
LLPS-Asm-3719Astyanax mexicanus41.414e-144 470
LLPS-Fec-3363Felis catus41.391e-140 462
LLPS-Chs-1109Chlorocebus sabaeus41.323e-138 456
LLPS-Cea-1032Cercocebus atys41.323e-138 456
LLPS-Man-0529Macaca nemestrina41.322e-138 456
LLPS-Cas-0875Carlito syrichta41.33e-140 461
LLPS-Loa-1134Loxodonta africana41.275e-140 460
LLPS-Mup-3234Mustela putorius furo41.264e-139 458
LLPS-Cap-3656Cavia porcellus41.232e-137 453
LLPS-Xim-0235Xiphophorus maculatus41.123e-136 446
LLPS-Orn-1974Oreochromis niloticus41.129e-141 461
LLPS-Lac-0389Latimeria chalumnae41.129e-136 448
LLPS-Tag-0700Taeniopygia guttata41.055e-116 377
LLPS-Fia-1310Ficedula albicollis40.991e-143 470
LLPS-Orc-1706Oryctolagus cuniculus40.962e-136 451
LLPS-Gaga-1961Gallus gallus40.951e-143 471
LLPS-Dio-0648Dipodomys ordii40.671e-136 451
LLPS-Tar-0502Takifugu rubripes40.557e-134 445
LLPS-Ten-0839Tetraodon nigroviridis40.511e-112 368
LLPS-Sus-0828Sus scrofa40.53e-138 456
LLPS-Aim-0857Ailuropoda melanoleuca40.413e-139 458
LLPS-Pes-1022Pelodiscus sinensis40.413e-139 457
LLPS-Urm-1448Ursus maritimus40.357e-129 427
LLPS-Gaa-3927Gasterosteus aculeatus40.277e-114 372
LLPS-Cis-0250Ciona savignyi39.462e-105 349
LLPS-Scm-1740Scophthalmus maximus39.462e-109 379
LLPS-Orl-0488Oryzias latipes39.161e-124 402
LLPS-Osl-0831Ostreococcus lucimarinus38.823e-145 466
LLPS-Chc-1186Chondrus crispus37.525e-91 313
LLPS-Ast-0529Aspergillus terreus37.042e-92 327
LLPS-Asni-1518Aspergillus niger37.027e-94 331
LLPS-Nef-0978Neosartorya fischeri37.021e-94 333
LLPS-Ict-4170Ictidomys tridecemlineatus36.919e-103 360
LLPS-Cii-1883Ciona intestinalis36.796e-105 356
LLPS-Asfu-1519Aspergillus fumigatus36.674e-96 338
LLPS-Asf-0308Aspergillus flavus36.52e-95 334
LLPS-Aso-1343Aspergillus oryzae36.59e-96 333
LLPS-Cym-0584Cyanidioschyzon merolae36.265e-74 271
LLPS-Scp-1470Schizosaccharomyces pombe36.176e-98 339
LLPS-Scs-0800Sclerotinia sclerotiorum36.163e-96 337
LLPS-Trv-0815Trichoderma virens35.941e-97 341
LLPS-Dos-1114Dothistroma septosporum35.921e-96 340
LLPS-Scc-1358Schizosaccharomyces cryophilus35.838e-99 342
LLPS-Kop-1452Komagataella pastoris35.811e-96 338
LLPS-Fus-1382Fusarium solani35.548e-93 327
LLPS-Fuv-0934Fusarium verticillioides35.511e-96 338
LLPS-Fuo-0435Fusarium oxysporum35.513e-96 337
LLPS-Yal-1537Yarrowia lipolytica35.58e-104 358
LLPS-Zyt-1066Zymoseptoria tritici35.377e-98 343
LLPS-Hov-1497Hordeum vulgare35.332e-101 353
LLPS-Gas-0252Galdieria sulphuraria35.244e-74 272
LLPS-Scj-1240Schizosaccharomyces japonicus35.162e-93 327
LLPS-Cog-1436Colletotrichum gloeosporioides34.632e-87 312
LLPS-Asn-0754Aspergillus nidulans34.565e-102 354
LLPS-Blg-1346Blumeria graminis34.289e-97 339
LLPS-Chr-1478Chlamydomonas reinhardtii32.875e-86 311
LLPS-Trr-0758Trichoderma reesei32.591e-97 341
LLPS-Coo-0860Colletotrichum orbiculare32.533e-77 281
LLPS-Put-0080Puccinia triticina32.471e-69 258
LLPS-Asg-1244Ashbya gossypii32.357e-71 259
LLPS-Sac-1211Saccharomyces cerevisiae32.068e-71 258