LLPS-Art-0929
UGD3

▼ OVERVIEW

Status: Reviewed
Protein Name: UDP-glucose 6-dehydrogenase 3
Gene Name: UGD3, At5g15490, T20K14_100
Ensembl Gene: AT5G15490
Ensembl Protein: AT5G15490.1
Organism: Arabidopsis thaliana
Taxa ID: 3702
LLPS Type: Others


▼ PROPERTY


——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:
CondensateDescriptionTissue/CellPMIDs
Nucleolus
"...We identified 1602 proteins in the nucleolar and 2544 proteins in the nuclear fraction with an overlap of 1429 proteins."
Arabidopsis thaliana cells26980300

▼ FUNCTION

Involved in the biosynthesis of UDP-glucuronic acid (UDP-GlcA), providing nucleotide sugars for cell-wall polymers. Required for the formation of cell wall ingrowths on the outer cell walls of nematode-induced syncytia.

▼ CROSS REFERENCE

▼ SEQUENCE

Protein Sequence (FASTA)
1     MVKICCIGAG  YVGGPTMAVI  ALKCPSVEVA  VVDISVPRIN  AWNSDQLPIY  EPGLDDVVKQ  60
61    CRGKNLFFST  DVEKHVREAD  IVFVSVNTPT  KTRGLGAGKA  ADLTYWESAA  RMIADVSVSD  120
121   KIVVEKSTVP  VKTAEAIEKI  LTHNSKGIKF  QILSNPEFLA  EGTAIEDLFM  PDRVLIGGRE  180
181   TTEGFAAVKA  LKDIYAQWVP  EERILTTNLW  SAELSKLAAN  AFLAQRISSV  NAMSALCEAT  240
241   GANVSEVSYA  VGKDSRIGPK  FLNSSVGFGG  SCFQKDILNL  VYICECNGLP  EVAEYWKQVI  300
301   KINDYQKTRF  VNRIVSSMFN  TVSNKKIAVL  GFAFKKDTGD  TRETPAIDVC  KGLLGDKARL  360
361   SIYDPQVTEE  QIQRDLTMNK  FDWDHPLHLQ  PMSPTTVKQV  SVAWDAYTAT  KDAHGICILT  420
421   EWDEFKKLDF  QRIFENMQKP  AFVFDGRNVV  DADKLREIGF  IVYSIGKPLD  QWLKDMPALA  480
Nucleotide CDS Sequence (FASTA)
1     ATGGTGAAGA  TTTGCTGCAT  TGGAGCTGGA  TATGTTGGTG  GTCCAACCAT  GGCTGTCATT  60
61    GCTCTAAAGT  GTCCATCTGT  TGAAGTAGCT  GTTGTTGATA  TCTCTGTGCC  AAGGATCAAT  120
121   GCCTGGAACA  GTGATCAGTT  ACCGATCTAT  GAGCCTGGTC  TTGATGATGT  CGTTAAGCAG  180
181   TGCCGTGGAA  AGAATCTCTT  CTTCAGCACC  GATGTTGAGA  AACATGTGAG  AGAGGCTGAC  240
241   ATTGTTTTTG  TGTCTGTCAA  CACCCCTACT  AAGACCCGTG  GTCTTGGAGC  TGGCAAAGCT  300
301   GCGGATTTGA  CTTACTGGGA  GAGCGCTGCT  CGTATGATTG  CCGATGTTTC  GGTTTCCGAC  360
361   AAGATTGTTG  TTGAGAAATC  AACTGTTCCT  GTCAAAACCG  CAGAGGCAAT  TGAGAAGATT  420
421   CTTACACACA  ACAGCAAAGG  AATCAAATTC  CAGATTCTGT  CAAACCCTGA  GTTCCTTGCT  480
481   GAAGGAACCG  CTATTGAAGA  CCTTTTCATG  CCTGACCGTG  TCCTCATCGG  TGGTCGTGAA  540
541   ACAACTGAAG  GCTTTGCAGC  CGTCAAAGCC  TTGAAAGACA  TTTATGCCCA  ATGGGTCCCT  600
601   GAAGAGAGAA  TCCTCACCAC  CAATCTATGG  TCTGCCGAGC  TTTCCAAGCT  TGCAGCTAAT  660
661   GCCTTCCTAG  CCCAGAGAAT  CTCATCAGTC  AATGCAATGT  CCGCTCTCTG  TGAGGCAACT  720
721   GGCGCCAATG  TCTCAGAGGT  CTCTTATGCT  GTGGGCAAAG  ACTCTCGTAT  TGGTCCCAAG  780
781   TTCTTGAACT  CTAGTGTTGG  GTTCGGAGGA  TCTTGTTTCC  AGAAAGATAT  TCTCAACTTA  840
841   GTCTACATCT  GCGAATGCAA  CGGCTTACCC  GAAGTTGCTG  AGTACTGGAA  ACAAGTCATC  900
901   AAGATCAACG  ACTACCAGAA  AACCCGATTT  GTTAACCGCA  TTGTCTCTTC  AATGTTTAAC  960
961   ACAGTCTCCA  ACAAAAAGAT  TGCGGTTCTC  GGCTTCGCTT  TCAAGAAAGA  CACTGGAGAC  1020
1021  ACTAGAGAGA  CTCCAGCCAT  TGATGTCTGC  AAAGGTCTGT  TAGGTGACAA  GGCTCGTCTC  1080
1081  AGCATCTACG  ACCCACAAGT  CACTGAAGAG  CAGATCCAAA  GAGACTTAAC  CATGAACAAA  1140
1141  TTCGACTGGG  ACCACCCACT  TCATCTCCAG  CCCATGAGCC  CCACCACTGT  GAAGCAAGTC  1200
1201  TCAGTCGCTT  GGGACGCATA  CACTGCAACC  AAAGACGCCC  ACGGTATCTG  CATTTTAACC  1260
1261  GAGTGGGACG  AGTTCAAGAA  ACTTGATTTC  CAGCGGATCT  TTGAGAATAT  GCAGAAACCG  1320
1321  GCTTTTGTTT  TTGACGGTAG  AAACGTGGTC  GACGCTGATA  AACTCAGGGA  GATTGGGTTT  1380
1381  ATTGTTTACT  CCATTGGTAA  GCCATTGGAC  CAGTGGCTCA  AGGACATGCC  TGCTCTTGCC  1440
1441  TAA  1443

▼ KEYWORD

ID
Family
Complete proteome
NAD
Oxidoreductase
Reference proteome

▼ GENE ONTOLOGY

ID
Classification
Description
Cellular Component
Cell wall
Cellular Component
Cytosol
Cellular Component
Nucleus
Molecular Function
NAD binding
Molecular Function
UDP-glucose 6-dehydrogenase activity
Biological Process
Carbohydrate metabolic process
Biological Process
Cell wall pectin metabolic process
Biological Process
Glycosaminoglycan biosynthetic process
Biological Process
UDP-glucuronate biosynthetic process

▼ KEGG


▼ ANNOTATION

Disorder
IUPred2A
Physicochemical
Compute pI/MwAAindex
Function
PIRSF
Localization
COMPARTMENTS
Expression
ArrayExpress

▼ ORTHOLOGY

DrLLPS IDOrganismIdentityE-valueScore
LLPS-Arl-1780Arabidopsis lyrata98.960.0 985
LLPS-Bro-1230Brassica oleracea98.120.0 980
LLPS-Brn-3353Brassica napus98.120.0 979
LLPS-Brr-2127Brassica rapa97.920.0 978
LLPS-Thc-1702Theobroma cacao92.290.0 931
LLPS-Gor-2383Gossypium raimondii92.080.0 927
LLPS-Coc-0779Corchorus capsularis91.880.0 924
LLPS-Nia-1274Nicotiana attenuata91.460.0 927
LLPS-Glm-0676Glycine max91.460.0 920
LLPS-Vir-0866Vigna radiata91.250.0 920
LLPS-Via-2054Vigna angularis91.250.0 918
LLPS-Phv-2496Phaseolus vulgaris90.830.0 916
LLPS-Met-1399Medicago truncatula90.830.0 918
LLPS-Mae-0990Manihot esculenta90.620.0 918
LLPS-Sol-1722Solanum lycopersicum90.210.0 917
LLPS-Tra-2762Triticum aestivum90.00.0 908
LLPS-Sei-0931Setaria italica89.790.0 912
LLPS-Dac-1971Daucus carota89.790.0 914
LLPS-Sot-0429Solanum tuberosum89.60.0 906
LLPS-Brd-2122Brachypodium distachyon89.580.0 905
LLPS-Zem-1692Zea mays89.380.0 905
LLPS-Orbr-1664Oryza brachyantha89.380.0 903
LLPS-Cus-1309Cucumis sativus89.380.0 905
LLPS-Hov-0042Hordeum vulgare89.380.0 903
LLPS-Pot-0486Populus trichocarpa89.190.0 895
LLPS-Lep-0903Leersia perrieri89.170.0 902
LLPS-Sob-1720Sorghum bicolor88.960.0 903
LLPS-Orr-1094Oryza rufipogon88.750.0 899
LLPS-Ors-2377Oryza sativa88.750.0 899
LLPS-Ori-1458Oryza indica88.750.0 899
LLPS-Orp-1931Oryza punctata88.730.0 898
LLPS-Orni-0380Oryza nivara88.540.0 896
LLPS-Orb-0226Oryza barthii88.540.0 897
LLPS-Org-1056Oryza glaberrima88.330.0 898
LLPS-Tru-2054Triticum urartu88.150.0 865
LLPS-Prp-1304Prunus persica87.080.0 887
LLPS-Viv-1781Vitis vinifera86.880.0 890
LLPS-Orgl-0253Oryza glumaepatula86.070.0 879
LLPS-Php-0683Physcomitrella patens85.710.0 867
LLPS-Orm-0374Oryza meridionalis82.780.0 853
LLPS-Amt-2138Amborella trichopoda76.663e-165 476
LLPS-Mua-2322Musa acuminata73.220.0 710
LLPS-Lac-3747Latimeria chalumnae67.353e-1479.0
LLPS-Drm-1445Drosophila melanogaster64.320.0 612
LLPS-Abg-1434Absidia glauca61.880.0 594
LLPS-Crn-0973Cryptococcus neoformans61.720.0 591
LLPS-Caf-1831Canis familiaris61.540.0 582
LLPS-Urm-2493Ursus maritimus61.540.0 582
LLPS-Mup-2986Mustela putorius furo61.540.0 582
LLPS-Sah-3979Sarcophilus harrisii61.420.0 575
LLPS-Pes-3480Pelodiscus sinensis61.320.0 582
LLPS-Fec-4477Felis catus61.320.0 583
LLPS-Ran-0917Rattus norvegicus61.320.0 582
LLPS-Ict-3235Ictidomys tridecemlineatus61.110.0 580
LLPS-Nol-0407Nomascus leucogenys61.110.0 580
LLPS-Cas-0921Carlito syrichta61.110.0 581
LLPS-Poa-3037Pongo abelii61.110.0 581
LLPS-Eqc-4543Equus caballus61.110.0 579
LLPS-Rhb-3652Rhinopithecus bieti61.110.0 581
LLPS-Loa-2669Loxodonta africana61.110.0 582
LLPS-Pat-3876Pan troglodytes61.110.0 581
LLPS-Hos-3978Homo sapiens61.110.0 581
LLPS-Mod-1166Monodelphis domestica61.110.0 582
LLPS-Mal-3174Mandrillus leucophaeus61.110.0 581
LLPS-Ova-3673Ovis aries61.110.0 581
LLPS-Bot-0314Bos taurus61.110.0 580
LLPS-Fud-2203Fukomys damarensis61.110.0 579
LLPS-Gog-1770Gorilla gorilla61.110.0 581
LLPS-Cea-2208Cercocebus atys61.110.0 581
LLPS-Chs-4513Chlorocebus sabaeus61.110.0 581
LLPS-Ora-0323Ornithorhynchus anatinus61.110.0 582
LLPS-Myl-1833Myotis lucifugus60.980.0 574
LLPS-Pap-3754Pan paniscus60.90.0 579
LLPS-Paa-2682Papio anubis60.90.0 580
LLPS-Caj-3488Callithrix jacchus60.90.0 579
LLPS-Man-2941Macaca nemestrina60.670.0 545
LLPS-Leo-2394Lepisosteus oculatus60.210.0 594
LLPS-Orc-4325Oryctolagus cuniculus59.660.0 556
LLPS-Yal-0576Yarrowia lipolytica59.580.0 569
LLPS-Tut-1576Tursiops truncatus58.550.0 543
LLPS-Pug-0427Puccinia graminis58.330.0 551
LLPS-Otg-1217Otolemur garnettii58.120.0 541
LLPS-Put-1314Puccinia triticina57.260.0 544
LLPS-Fus-1274Fusarium solani50.04e-149 446
LLPS-Fuo-1387Fusarium oxysporum48.682e-147 442
LLPS-Fuv-1111Fusarium verticillioides48.685e-147 441
LLPS-Aso-0705Aspergillus oryzae46.119e-144 429
LLPS-Cogr-1475Colletotrichum graminicola45.217e-131 402
LLPS-Nec-0011Neurospora crassa44.215e-132 404
LLPS-Ast-1309Aspergillus terreus42.145e-136 409
LLPS-Asni-0170Aspergillus niger40.211e-107 335
LLPS-Cym-0644Cyanidioschyzon merolae29.55e-1993.2
LLPS-Pyt-0378Pyrenophora teres24.542e-0757.0
LLPS-Pytr-1508Pyrenophora triticirepentis23.042e-0757.8