LLPS-Art-0869
At3g29075
▼ OVERVIEW
| Status: | Reviewed |
| Protein Name: | Glycine-rich protein |
| Gene Name: | At3g29075 |
| Ensembl Gene: | AT3G29075 |
| Ensembl Protein: | AT3G29075.1 |
| Organism: | Arabidopsis thaliana |
| Taxa ID: | 3702 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Description | Tissue/Cell | PMIDs |
|---|---|---|---|
| Nucleolus | "...We identified 1602 proteins in the nucleolar and 2544 proteins in the nuclear fraction with an overlap of 1429 proteins." | Arabidopsis thaliana cells | 26980300 |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | AT3G29075.1 | AT3G29075.1 |
| UniProt | Q9LJV8, Q9LJV8_ARATH | |
| GeneBank | AP000388, CP002686, AB018121 | BAB02950.1, AEE77532.1 |
| RefSeq | NM_113830.3 | NP_189551.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MPYYTNDDND VDDFTEYDPM PYSGGYDITV TYGRSIPPSD ETCYPLSSLS GDAFEYQRPN 60 61 FSSNHDSSAY DDQALKTEYS SYARPGPVGS GSDFGRKPNS GYGGRTEVEY GRKTESEHGS 120 121 GYGGRIESDY VKPSYGGHED DGDDGHKKHS GKDYDDGDEK SKKKEKEKKK DKKKDGNNSE 180 181 DDEFKKKKKK EQYKEHHDDD DYDEKKKKKK DYNDDDEKKK KKHYNDDDDE KKKKHNYNDD 240 241 DDEKKKKKEY HDDEDKKKKK HYDNDDDEKK KKKDHRDDDD EKKKKKDKHH KGHD 294 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGCCGTATT ACACCAACGA CGACAATGAC GTCGACGATT TCACCGAATA CGATCCGATG 60 61 CCTTATAGTG GAGGCTACGA CATCACCGTG ACATACGGCC GTTCAATTCC ACCGTCCGAC 120 121 GAGACTTGTT ACCCTCTCTC CTCTCTCTCC GGCGACGCCT TTGAGTATCA GCGACCTAAT 180 181 TTCTCTTCTA ACCACGATTC TTCTGCTTAT GACGACCAAG CTCTTAAAAC CGAGTACAGT 240 241 AGCTATGCAC GACCCGGACC CGTTGGATCT GGATCTGATT TTGGCCGGAA ACCTAATTCT 300 301 GGATATGGAG GGAGAACGGA GGTTGAGTAT GGCCGGAAAA CTGAATCGGA GCATGGATCT 360 361 GGCTATGGTG GAAGAATTGA GAGCGATTAC GTGAAGCCTA GCTATGGCGG TCACGAGGAT 420 421 GATGGTGACG ATGGTCACAA AAAACATAGT GGTAAGGATT ATGATGATGG AGATGAGAAG 480 481 AGTAAGAAGA AGGAGAAGGA GAAGAAGAAG GATAAGAAGA AAGATGGTAA TAACTCTGAA 540 541 GATGATGAGT TTAAGAAGAA GAAGAAGAAA GAGCAGTACA AGGAGCATCA TGATGATGAT 600 601 GATTATGATG AGAAGAAGAA GAAGAAGAAA GACTATAATG ATGATGATGA GAAGAAGAAG 660 661 AAGAAGCATT ATAATGATGA TGATGATGAG AAGAAGAAGA AGCATAATTA CAATGATGAT 720 721 GATGATGAGA AGAAGAAGAA GAAGGAGTAT CATGATGATG AGGATAAGAA GAAGAAGAAG 780 781 CACTATGATA ATGATGATGA TGAGAAGAAG AAGAAGAAGG ATCATCGTGA TGATGATGAT 840 841 GAGAAGAAGA AGAAGAAGGA TAAGCACCAC AAGGGACATG ACTAA 885 |
▼ ANNOTATION
| Disorder | ||||
| IUPred2A | ||||
| Physicochemical | ||||
| Compute pI/Mw | AAindex | |||
| Localization | ||||
| COMPARTMENTS | ||||
| Expression | ||||
| ArrayExpress | ||||
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Arl-2962 | Arabidopsis lyrata | 90.58 | 2e-76 | 242 |
| LLPS-Bro-2942 | Brassica oleracea | 70.27 | 4e-48 | 167 |
| LLPS-Brd-1190 | Brachypodium distachyon | 68.29 | 1e-12 | 69.3 |
| LLPS-Brr-0947 | Brassica rapa | 64.1 | 2e-43 | 156 |
| LLPS-Amt-2114 | Amborella trichopoda | 58.97 | 7e-08 | 57.0 |
| LLPS-Glm-0258 | Glycine max | 58.33 | 6e-23 | 101 |
| LLPS-Met-1783 | Medicago truncatula | 54.61 | 1e-28 | 118 |
| LLPS-Cus-1923 | Cucumis sativus | 54.37 | 2e-25 | 107 |
| LLPS-Sob-0830 | Sorghum bicolor | 53.57 | 8e-12 | 67.0 |
| LLPS-Pot-1286 | Populus trichocarpa | 52.71 | 5e-26 | 110 |
| LLPS-Via-1765 | Vigna angularis | 52.41 | 1e-28 | 117 |
| LLPS-Coc-1452 | Corchorus capsularis | 51.37 | 3e-26 | 110 |
| LLPS-Prp-1751 | Prunus persica | 51.06 | 2e-26 | 111 |
| LLPS-Vir-1828 | Vigna radiata | 50.99 | 3e-28 | 116 |
| LLPS-Mae-0560 | Manihot esculenta | 48.55 | 2e-27 | 111 |
| LLPS-Dac-0028 | Daucus carota | 47.83 | 6e-13 | 69.3 |
| LLPS-Phv-0487 | Phaseolus vulgaris | 46.71 | 1e-27 | 115 |
| LLPS-Thc-1822 | Theobroma cacao | 45.45 | 8e-25 | 106 |
| LLPS-Sol-0486 | Solanum lycopersicum | 45.34 | 4e-23 | 101 |
| LLPS-Sot-2112 | Solanum tuberosum | 44.94 | 2e-22 | 99.4 |
| LLPS-Nia-1395 | Nicotiana attenuata | 43.86 | 9e-25 | 107 |
| LLPS-Orbr-1487 | Oryza brachyantha | 43.75 | 7e-11 | 66.2 |
| LLPS-Gor-2257 | Gossypium raimondii | 42.67 | 1e-18 | 87.0 |
| LLPS-Orb-1527 | Oryza barthii | 41.58 | 2e-14 | 76.3 |
| LLPS-Lep-0372 | Leersia perrieri | 41.48 | 6e-14 | 75.1 |
| LLPS-Mua-2550 | Musa acuminata | 40.29 | 7e-15 | 75.1 |
| LLPS-Viv-2344 | Vitis vinifera | 40.1 | 2e-22 | 99.8 |
| LLPS-Orr-1756 | Oryza rufipogon | 40.0 | 9e-14 | 72.0 |
| LLPS-Ori-2088 | Oryza indica | 40.0 | 9e-14 | 72.0 |
| LLPS-Orni-0808 | Oryza nivara | 40.0 | 9e-14 | 72.0 |
| LLPS-Orgl-1356 | Oryza glumaepatula | 40.0 | 4e-14 | 73.2 |
| LLPS-Org-2000 | Oryza glaberrima | 39.09 | 9e-13 | 69.3 |
| LLPS-Orp-0313 | Oryza punctata | 38.68 | 7e-11 | 66.2 |
| LLPS-Ors-2297 | Oryza sativa | 35.83 | 2e-11 | 68.2 |
| LLPS-Tra-1035 | Triticum aestivum | 31.54 | 2e-07 | 55.1 |