LLPS-Art-0371
At4g26870
▼ OVERVIEW
Status: | Reviewed |
Protein Name: | Aspartate--tRNA ligase 1, cytoplasmic; Aspartyl-tRNA synthetase; AspRS |
Gene Name: | At4g26870, F10M23.210 |
Ensembl Gene: | AT4G26870 |
Ensembl Protein: | AT4G26870.1 |
Organism: | Arabidopsis thaliana |
Taxa ID: | 3702 |
LLPS Type: | Client |
▼ Classification
Condensates:
Condensate | Description | Tissue/Cell | PMIDs |
---|---|---|---|
Nucleolus | "...We identified 1602 proteins in the nucleolar and 2544 proteins in the nuclear fraction with an overlap of 1429 proteins." | Arabidopsis thaliana cells | 26980300 |
▼ FUNCTION
Catalyzes the specific attachment of an amino acid to its cognate tRNA in a 2 step reaction: the amino acid (AA) is first activated by ATP to form AA-AMP and then transferred to the acceptor end of the tRNA. |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | AT4G26870.1 | AT4G26870.1 |
UniProt | Q8H104, SYDC1_ARATH, Q9SZ27 | |
GeneBank | AL161566, BT000939, CP002687, AL035440 | CAB79542.1, AAN41339.1, AEE85263.1, CAB36533.1 |
RefSeq | NM_118821.6 | NP_194417.2 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MVGSEVLEEC GEKISKKESK KRAAKLEKLL RKQEREEATS SSLSLEEEDE SCSSNYGDVT 60 61 TNELQSAVEG KELTDVSNLV EEIVGSEVSI RGRLHKNRLV GTKLFVILRE SGFTVQCVVE 120 121 ETRVGANMIK FVKQLSRESV VELIGVVSHP KKPLTGTTQQ VEIHVRKMYC LSRSLPNLPL 180 181 VVEDAARSES DIEKSGKDGK QAARVLQDTR LNNRVLDIRT PANQAIFRIQ CQVQIAFREY 240 241 LQSKGFLEIH TPKLIAGSSE GGSAVFRLDY KGQPACLAQS PQLHKQMAIC GDMRRVFEVG 300 301 PVFRAEDSFT HRHLCEFVGL DVEMEIRMHY SEIMDLVGEL FPFIFTKIEE RCPKELESVR 360 361 KQYPFQSLKF LPQTLRLTFA EGIQMLKEAG EEVDPLGDLN TESERKLGQL VLEKYKTEFY 420 421 MLHRYPSAVR PFYTMPYEND SNYSNSFDVF IRGEEIMSGA QRIHDPELLE KRARECGIDV 480 481 KTISTYIDAF RYGAPPHGGF GVGLERVVML LCALNNIRKT SLFPRDSQRL TP 532 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGTGGGAT CAGAGGTTTT GGAGGAATGT GGAGAAAAAA TAAGCAAGAA AGAGTCAAAG 60 61 AAGCGAGCCG CTAAACTGGA GAAGTTGCTC CGTAAACAGG AACGAGAAGA AGCCACATCA 120 121 TCATCTCTTT CTCTGGAGGA GGAGGATGAA TCGTGTTCCA GCAACTACGG TGACGTGACT 180 181 ACTAACGAGT TGCAGTCGGC TGTTGAGGGA AAAGAGCTCA CTGATGTGAG CAACTTGGTT 240 241 GAAGAGATTG TGGGGTCAGA GGTTTCGATC AGAGGTCGAC TGCACAAGAA TCGCTTAGTC 300 301 GGTACCAAAT TGTTTGTGAT CTTGAGGGAA AGTGGATTCA CGGTTCAATG CGTGGTGGAG 360 361 GAGACCAGAG TTGGTGCAAA CATGATTAAA TTTGTCAAGC AGCTGAGTCG TGAATCTGTT 420 421 GTTGAGCTTA TCGGTGTCGT CTCTCACCCT AAGAAGCCTC TCACAGGAAC CACCCAGCAG 480 481 GTTGAAATAC ATGTCAGAAA AATGTACTGC CTCAGCAGAT CCTTGCCAAA TTTACCACTT 540 541 GTTGTGGAGG ATGCTGCTCG TAGTGAATCA GATATTGAAA AATCTGGCAA GGATGGCAAA 600 601 CAAGCTGCTC GTGTCCTTCA GGACACACGT TTGAATAATA GGGTTCTTGA CATCAGAACA 660 661 CCGGCTAATC AAGCCATCTT CCGTATTCAG TGCCAAGTCC AAATTGCGTT CAGAGAATAC 720 721 TTACAATCCA AGGGGTTTCT TGAAATCCAC ACACCGAAAT TGATCGCTGG CAGTAGTGAA 780 781 GGAGGTTCTG CTGTGTTTAG GTTGGACTAC AAAGGGCAGC CTGCTTGTCT GGCTCAGTCT 840 841 CCTCAGCTTC ATAAGCAGAT GGCGATATGT GGTGACATGC GACGCGTCTT TGAGGTTGGT 900 901 CCTGTTTTCA GAGCTGAAGA CTCCTTCACT CATAGACACC TGTGTGAATT CGTTGGTCTT 960 961 GATGTGGAGA TGGAGATTCG AATGCACTAC TCTGAGATAA TGGATCTTGT GGGGGAGTTG 1020 1021 TTTCCGTTCA TATTCACAAA AATAGAAGAA AGGTGCCCAA AGGAACTTGA ATCTGTCAGA 1080 1081 AAGCAATACC CTTTTCAATC TTTGAAGTTT CTTCCGCAAA CATTGAGGCT AACCTTTGCA 1140 1141 GAAGGGATTC AAATGCTTAA GGAAGCTGGC GAGGAGGTTG ATCCTCTTGG TGATCTAAAT 1200 1201 ACAGAATCTG AGAGGAAACT TGGCCAGCTT GTTCTGGAAA AGTACAAGAC GGAGTTCTAC 1260 1261 ATGCTGCATC GCTATCCATC GGCTGTCAGA CCGTTCTACA CTATGCCCTA TGAAAATGAT 1320 1321 TCTAACTACA GCAACTCTTT CGATGTCTTC ATCAGAGGAG AGGAGATCAT GTCAGGAGCT 1380 1381 CAACGTATCC ATGACCCAGA ACTCTTGGAG AAGCGCGCAA GAGAATGCGG CATTGATGTC 1440 1441 AAGACAATAT CCACGTACAT TGATGCATTC AGGTACGGTG CACCACCTCA CGGTGGATTC 1500 1501 GGAGTGGGGC TGGAGCGTGT GGTAATGCTC TTATGTGCCC TCAATAACAT CCGCAAAACT 1560 1561 TCGCTATTCC CTCGTGACTC TCAAAGGCTC ACTCCCTAA 1599 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Aminoacyl-tRNA synthetase multienzyme complex | |
Cellular Component | Cytosol | |
Cellular Component | Plasmodesma | |
Molecular Function | Aspartate-tRNA ligase activity | |
Molecular Function | ATP binding | |
Molecular Function | DNA binding | |
Molecular Function | Metal ion binding | |
Molecular Function | RNA binding | |
Biological Process | Aspartyl-tRNA aminoacylation | |
Biological Process | Response to cadmium ion |
▼ ANNOTATION
Disorder | ||||
IUPred2A |
Physicochemical | ||||
Compute pI/Mw | AAindex |
Function | ||||
PIRSF |
Localization | ||||
COMPARTMENTS |
Expression | ||||
ArrayExpress |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Arl-2456 | Arabidopsis lyrata | 93.72 | 0.0 | 905 |
LLPS-Brn-0177 | Brassica napus | 91.42 | 0.0 | 897 |
LLPS-Bro-0399 | Brassica oleracea | 90.06 | 0.0 | 891 |
LLPS-Brr-0891 | Brassica rapa | 76.67 | 0.0 | 766 |
LLPS-Prp-1926 | Prunus persica | 72.43 | 7e-160 | 464 |
LLPS-Mua-0977 | Musa acuminata | 70.86 | 0.0 | 613 |
LLPS-Sol-1039 | Solanum lycopersicum | 70.39 | 0.0 | 704 |
LLPS-Tru-0888 | Triticum urartu | 69.36 | 2e-148 | 435 |
LLPS-Coc-0347 | Corchorus capsularis | 68.97 | 0.0 | 671 |
LLPS-Orb-0244 | Oryza barthii | 68.68 | 0.0 | 627 |
LLPS-Dac-1911 | Daucus carota | 68.53 | 0.0 | 680 |
LLPS-Mae-0460 | Manihot esculenta | 68.53 | 0.0 | 682 |
LLPS-Viv-2104 | Vitis vinifera | 68.46 | 0.0 | 674 |
LLPS-Gor-0016 | Gossypium raimondii | 68.29 | 0.0 | 697 |
LLPS-Glm-2971 | Glycine max | 68.12 | 0.0 | 674 |
LLPS-Cus-1654 | Cucumis sativus | 68.12 | 0.0 | 681 |
LLPS-Nia-0494 | Nicotiana attenuata | 68.11 | 0.0 | 681 |
LLPS-Vir-0448 | Vigna radiata | 67.08 | 0.0 | 667 |
LLPS-Thc-1325 | Theobroma cacao | 67.07 | 0.0 | 673 |
LLPS-Via-1208 | Vigna angularis | 66.87 | 0.0 | 666 |
LLPS-Met-0080 | Medicago truncatula | 66.87 | 0.0 | 671 |
LLPS-Hea-0480 | Helianthus annuus | 66.6 | 0.0 | 662 |
LLPS-Amt-1480 | Amborella trichopoda | 66.39 | 0.0 | 658 |
LLPS-Orp-0804 | Oryza punctata | 65.84 | 0.0 | 659 |
LLPS-Orgl-1425 | Oryza glumaepatula | 65.7 | 0.0 | 655 |
LLPS-Ori-0879 | Oryza indica | 65.63 | 0.0 | 658 |
LLPS-Orni-0606 | Oryza nivara | 65.63 | 0.0 | 658 |
LLPS-Orr-1283 | Oryza rufipogon | 65.63 | 0.0 | 658 |
LLPS-Orm-1205 | Oryza meridionalis | 65.63 | 0.0 | 658 |
LLPS-Org-0320 | Oryza glaberrima | 65.63 | 0.0 | 658 |
LLPS-Php-0814 | Physcomitrella patens | 65.49 | 0.0 | 648 |
LLPS-Ors-0370 | Oryza sativa | 65.42 | 0.0 | 657 |
LLPS-Brd-0842 | Brachypodium distachyon | 65.22 | 0.0 | 662 |
LLPS-Phv-1593 | Phaseolus vulgaris | 65.22 | 0.0 | 646 |
LLPS-Orbr-0842 | Oryza brachyantha | 65.01 | 0.0 | 657 |
LLPS-Pot-0112 | Populus trichocarpa | 64.94 | 0.0 | 659 |
LLPS-Sei-1468 | Setaria italica | 64.6 | 0.0 | 652 |
LLPS-Zem-1723 | Zea mays | 64.6 | 0.0 | 652 |
LLPS-Sob-1416 | Sorghum bicolor | 64.39 | 0.0 | 650 |
LLPS-Lep-1149 | Leersia perrieri | 64.18 | 0.0 | 648 |
LLPS-Tra-0932 | Triticum aestivum | 64.18 | 0.0 | 655 |
LLPS-Hov-0229 | Hordeum vulgare | 63.77 | 0.0 | 650 |
LLPS-Asm-0283 | Astyanax mexicanus | 63.56 | 5e-47 | 174 |
LLPS-Sem-0933 | Selaginella moellendorffii | 63.28 | 0.0 | 636 |
LLPS-Cis-0259 | Ciona savignyi | 57.46 | 1e-106 | 327 |
LLPS-Osl-0460 | Ostreococcus lucimarinus | 57.38 | 0.0 | 556 |
LLPS-Chr-0835 | Chlamydomonas reinhardtii | 56.64 | 0.0 | 547 |
LLPS-Sah-0946 | Sarcophilus harrisii | 53.22 | 4e-145 | 431 |
LLPS-Gas-0313 | Galdieria sulphuraria | 51.68 | 6e-146 | 452 |
LLPS-Aim-2178 | Ailuropoda melanoleuca | 51.15 | 7e-150 | 444 |
LLPS-Tag-1425 | Taeniopygia guttata | 51.08 | 5e-161 | 474 |
LLPS-Cym-0599 | Cyanidioschyzon merolae | 50.88 | 4e-153 | 457 |
LLPS-Anp-1585 | Anas platyrhynchos | 50.87 | 6e-160 | 472 |
LLPS-Fia-1908 | Ficedula albicollis | 50.87 | 4e-161 | 475 |
LLPS-Leo-0466 | Lepisosteus oculatus | 50.65 | 3e-158 | 469 |
LLPS-Orc-0269 | Oryctolagus cuniculus | 50.65 | 6e-158 | 467 |
LLPS-Gaga-1210 | Gallus gallus | 50.65 | 2e-158 | 468 |
LLPS-Abg-1180 | Absidia glauca | 50.52 | 9e-164 | 484 |
LLPS-Mum-0551 | Mus musculus | 50.43 | 5e-158 | 467 |
LLPS-Ova-1847 | Ovis aries | 50.43 | 3e-158 | 468 |
LLPS-Fec-0567 | Felis catus | 50.43 | 8e-157 | 464 |
LLPS-Xet-1664 | Xenopus tropicalis | 50.43 | 1e-159 | 473 |
LLPS-Cea-0620 | Cercocebus atys | 50.22 | 4e-153 | 454 |
LLPS-Chs-0606 | Chlorocebus sabaeus | 50.22 | 4e-153 | 454 |
LLPS-Maf-1046 | Macaca fascicularis | 50.22 | 4e-153 | 454 |
LLPS-Gog-1071 | Gorilla gorilla | 50.22 | 1e-153 | 456 |
LLPS-Dio-0420 | Dipodomys ordii | 50.22 | 6e-157 | 464 |
LLPS-Mup-0369 | Mustela putorius furo | 50.22 | 1e-156 | 464 |
LLPS-Paa-0789 | Papio anubis | 50.22 | 4e-153 | 454 |
LLPS-Man-0786 | Macaca nemestrina | 50.22 | 4e-153 | 454 |
LLPS-Hos-0086 | Homo sapiens | 50.22 | 1e-153 | 456 |
LLPS-Urm-0364 | Ursus maritimus | 50.22 | 1e-156 | 464 |
LLPS-Pap-1410 | Pan paniscus | 50.22 | 1e-153 | 456 |
LLPS-Rhb-2398 | Rhinopithecus bieti | 50.22 | 4e-153 | 454 |
LLPS-Pes-2700 | Pelodiscus sinensis | 50.22 | 8e-157 | 464 |
LLPS-Mam-1559 | Macaca mulatta | 50.22 | 4e-153 | 454 |
LLPS-Caf-0204 | Canis familiaris | 50.22 | 1e-156 | 464 |
LLPS-Nol-3237 | Nomascus leucogenys | 50.22 | 2e-153 | 456 |
LLPS-Myl-0225 | Myotis lucifugus | 50.21 | 9e-161 | 474 |
LLPS-Sus-0995 | Sus scrofa | 50.0 | 1e-156 | 464 |
LLPS-Aon-0713 | Aotus nancymaae | 50.0 | 6e-153 | 454 |
LLPS-Caj-0175 | Callithrix jacchus | 50.0 | 7e-153 | 454 |
LLPS-Scf-0254 | Scleropages formosus | 50.0 | 5e-159 | 471 |
LLPS-Drm-0785 | Drosophila melanogaster | 50.0 | 2e-155 | 462 |
LLPS-Mal-1353 | Mandrillus leucophaeus | 50.0 | 7e-153 | 454 |
LLPS-Pat-0060 | Pan troglodytes | 50.0 | 3e-154 | 457 |
LLPS-Gaa-2236 | Gasterosteus aculeatus | 49.78 | 9e-157 | 465 |
LLPS-Tut-0010 | Tursiops truncatus | 49.78 | 2e-156 | 463 |
LLPS-Ran-2675 | Rattus norvegicus | 49.78 | 8e-157 | 464 |
LLPS-Mod-1237 | Monodelphis domestica | 49.78 | 1e-155 | 461 |
LLPS-Dar-0146 | Danio rerio | 49.78 | 1e-156 | 465 |
LLPS-Otg-0969 | Otolemur garnettii | 49.78 | 2e-152 | 453 |
LLPS-Icp-2430 | Ictalurus punctatus | 49.57 | 3e-157 | 464 |
LLPS-Cas-0948 | Carlito syrichta | 49.57 | 2e-156 | 463 |
LLPS-Pof-1973 | Poecilia formosa | 49.46 | 7e-157 | 466 |
LLPS-Bot-2057 | Bos taurus | 49.42 | 2e-142 | 428 |
LLPS-Fud-0024 | Fukomys damarensis | 49.37 | 2e-158 | 468 |
LLPS-Ict-0393 | Ictidomys tridecemlineatus | 49.37 | 2e-157 | 466 |
LLPS-Tar-0761 | Takifugu rubripes | 49.35 | 9e-157 | 465 |
LLPS-Xim-2608 | Xiphophorus maculatus | 49.35 | 6e-158 | 468 |
LLPS-Scm-1586 | Scophthalmus maximus | 49.35 | 1e-155 | 462 |
LLPS-Orn-1262 | Oreochromis niloticus | 49.35 | 6e-157 | 466 |
LLPS-Yal-0309 | Yarrowia lipolytica | 49.15 | 8e-153 | 456 |
LLPS-Loa-0120 | Loxodonta africana | 49.14 | 7e-153 | 454 |
LLPS-Ten-1503 | Tetraodon nigroviridis | 49.13 | 9e-156 | 462 |
LLPS-Sac-1171 | Saccharomyces cerevisiae | 49.12 | 1e-144 | 435 |
LLPS-Chc-0237 | Chondrus crispus | 49.08 | 3e-151 | 452 |
LLPS-Cap-1961 | Cavia porcellus | 48.95 | 1e-155 | 461 |
LLPS-Poa-1157 | Pongo abelii | 48.92 | 1e-148 | 443 |
LLPS-Cii-0164 | Ciona intestinalis | 48.75 | 2e-158 | 469 |
LLPS-Lac-0861 | Latimeria chalumnae | 48.71 | 3e-154 | 459 |
LLPS-Orl-0459 | Oryzias latipes | 48.49 | 1e-153 | 457 |
LLPS-Anc-1441 | Anolis carolinensis | 48.27 | 3e-153 | 456 |
LLPS-Kop-0372 | Komagataella pastoris | 48.25 | 6e-148 | 443 |
LLPS-Eqc-3244 | Equus caballus | 48.05 | 2e-152 | 454 |
LLPS-Meg-1348 | Meleagris gallopavo | 47.95 | 3e-144 | 432 |
LLPS-Tum-0189 | Tuber melanosporum | 47.85 | 6e-145 | 436 |
LLPS-Asg-0730 | Ashbya gossypii | 47.54 | 2e-146 | 440 |
LLPS-Crn-0291 | Cryptococcus neoformans | 47.05 | 2e-150 | 450 |
LLPS-Usm-0731 | Ustilago maydis | 46.91 | 5e-144 | 434 |
LLPS-Scp-0716 | Schizosaccharomyces pombe | 46.75 | 1e-142 | 431 |
LLPS-Lem-0005 | Leptosphaeria maculans | 46.42 | 8e-126 | 386 |
LLPS-Spr-0257 | Sporisorium reilianum | 46.09 | 1e-141 | 427 |
LLPS-Cae-0683 | Caenorhabditis elegans | 45.96 | 4e-147 | 440 |
LLPS-Scj-1349 | Schizosaccharomyces japonicus | 45.94 | 2e-134 | 409 |
LLPS-Pug-0067 | Puccinia graminis | 45.85 | 7e-142 | 427 |
LLPS-Pytr-1042 | Pyrenophora triticirepentis | 45.77 | 7e-125 | 384 |
LLPS-Miv-0093 | Microbotryum violaceum | 45.49 | 1e-142 | 432 |
LLPS-Pyt-0442 | Pyrenophora teres | 45.12 | 1e-122 | 378 |
LLPS-Ora-1447 | Ornithorhynchus anatinus | 45.04 | 2e-135 | 409 |
LLPS-Phn-0670 | Phaeosphaeria nodorum | 44.84 | 5e-122 | 377 |
LLPS-Mel-0947 | Melampsora laricipopulina | 44.67 | 3e-142 | 428 |
LLPS-Scc-0517 | Schizosaccharomyces cryophilus | 44.49 | 1e-132 | 405 |
LLPS-Aso-0535 | Aspergillus oryzae | 44.21 | 3e-122 | 389 |
LLPS-Asf-1193 | Aspergillus flavus | 44.21 | 3e-122 | 389 |
LLPS-Asc-1411 | Aspergillus clavatus | 44.19 | 1e-124 | 383 |
LLPS-Mea-2653 | Mesocricetus auratus | 43.62 | 2e-116 | 357 |
LLPS-Asfu-0316 | Aspergillus fumigatus | 43.55 | 5e-122 | 377 |
LLPS-Nef-0721 | Neosartorya fischeri | 43.34 | 9e-122 | 376 |
LLPS-Asni-0697 | Aspergillus niger | 43.16 | 2e-119 | 370 |
LLPS-Dos-0062 | Dothistroma septosporum | 43.12 | 3e-125 | 398 |
LLPS-Coo-1274 | Colletotrichum orbiculare | 42.98 | 4e-113 | 363 |
LLPS-Asn-0262 | Aspergillus nidulans | 42.92 | 6e-121 | 374 |
LLPS-Map-1036 | Magnaporthe poae | 42.78 | 3e-96 | 306 |
LLPS-Ast-0579 | Aspergillus terreus | 42.77 | 4e-124 | 382 |
LLPS-Cog-1266 | Colletotrichum gloeosporioides | 41.87 | 7e-110 | 355 |
LLPS-Zyt-0163 | Zymoseptoria tritici | 41.68 | 2e-124 | 393 |
LLPS-Nec-1371 | Neurospora crassa | 41.25 | 7e-114 | 365 |
LLPS-Beb-0829 | Beauveria bassiana | 41.21 | 8e-112 | 359 |
LLPS-Ved-1459 | Verticillium dahliae | 41.2 | 1e-105 | 342 |
LLPS-Gag-1324 | Gaeumannomyces graminis | 40.8 | 1e-105 | 335 |
LLPS-Blg-0815 | Blumeria graminis | 40.56 | 2e-92 | 300 |
LLPS-Trr-0901 | Trichoderma reesei | 40.52 | 8e-111 | 355 |
LLPS-Mao-1391 | Magnaporthe oryzae | 40.26 | 1e-109 | 355 |
LLPS-Trv-1003 | Trichoderma virens | 40.17 | 8e-110 | 352 |
LLPS-Cogr-1405 | Colletotrichum graminicola | 40.17 | 8e-108 | 349 |
LLPS-Fuv-1553 | Fusarium verticillioides | 39.78 | 4e-108 | 346 |
LLPS-Fuo-0490 | Fusarium oxysporum | 39.57 | 2e-106 | 347 |
LLPS-Put-0480 | Puccinia triticina | 38.92 | 7e-87 | 281 |
LLPS-Fus-1241 | Fusarium solani | 38.9 | 3e-101 | 330 |
LLPS-Scs-1077 | Sclerotinia sclerotiorum | 38.34 | 1e-87 | 288 |