LLPS-Art-0359
NIR1

▼ OVERVIEW

Status: Reviewed
Protein Name: Ferredoxin--nitrite reductase, chloroplastic
Gene Name: NIR1, NIR, At2g15620, F9O13.17
Ensembl Gene: AT2G15620
Ensembl Protein: AT2G15620.1
Organism: Arabidopsis thaliana
Taxa ID: 3702
LLPS Type: Others


▼ PROPERTY


——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:
CondensateDescriptionTissue/CellPMIDs
Nucleolus
"...We identified 1602 proteins in the nucleolar and 2544 proteins in the nuclear fraction with an overlap of 1429 proteins."
Arabidopsis thaliana cells26980300

▼ FUNCTION

Catalyzes the six-electron reduction of nitrite to ammonium.

▼ SEQUENCE

Protein Sequence (FASTA)
1     MTSFSLTFTS  PLLPSSSTKP  KRSVLVAAAQ  TTAPAESTAS  VDADRLEPRV  ELKDGFFILK  60
61    EKFRKGINPQ  EKVKIEREPM  KLFMENGIEE  LAKKSMEELD  SEKSSKDDID  VRLKWLGLFH  120
121   RRKHQYGKFM  MRLKLPNGVT  TSAQTRYLAS  VIRKYGEDGC  ADVTTRQNWQ  IRGVVLPDVP  180
181   EILKGLASVG  LTSLQSGMDN  VRNPVGNPIA  GIDPEEIVDT  RPYTNLLSQF  ITANSQGNPD  240
241   FTNLPRKWNV  CVVGTHDLYE  HPHINDLAYM  PANKDGRFGF  NLLVGGFFSP  KRCEEAIPLD  300
301   AWVPADDVLP  LCKAVLEAYR  DLGTRGNRQK  TRMMWLIDEL  GVEGFRTEVE  KRMPNGKLER  360
361   GSSEDLVNKQ  WERRDYFGVN  PQKQEGLSFV  GLHVPVGRLQ  ADDMDELARL  ADTYGSGELR  420
421   LTVEQNIIIP  NVETSKTEAL  LQEPFLKNRF  SPEPSILMKG  LVACTGSQFC  GQAIIETKLR  480
481   ALKVTEEVER  LVSVPRPIRM  HWTGCPNTCG  QVQVADIGFM  GCLTRGEEGK  PVEGADVYVG  540
541   GRIGSDSHIG  EIYKKGVRVT  ELVPLVAEIL  IKEFGAVPRE  REENED  586
Nucleotide CDS Sequence (FASTA)
1     ATGACTTCTT  TCTCTCTCAC  TTTCACATCT  CCTCTCCTCC  CTTCCTCCTC  CACCAAACCC  60
61    AAAAGATCCG  TCCTTGTCGC  CGCCGCTCAG  ACCACAGCTC  CGGCCGAATC  CACCGCCTCT  120
121   GTTGACGCAG  ATCGTCTCGA  GCCAAGAGTT  GAGTTGAAAG  ATGGTTTTTT  TATTCTCAAG  180
181   GAGAAGTTTC  GAAAAGGGAT  CAATCCTCAG  GAGAAGGTTA  AGATCGAGAG  AGAGCCCATG  240
241   AAGTTGTTTA  TGGAGAATGG  TATTGAAGAG  CTTGCTAAGA  AATCTATGGA  AGAGCTTGAT  300
301   AGTGAAAAGT  CTTCTAAAGA  TGATATTGAT  GTTAGACTCA  AGTGGCTTGG  TCTCTTTCAC  360
361   CGTAGAAAGC  ATCAGTATGG  GAAGTTTATG  ATGAGGTTGA  AGTTACCAAA  TGGTGTGACT  420
421   ACAAGTGCAC  AGACTCGGTA  TTTAGCGAGT  GTGATTAGGA  AGTATGGTGA  AGATGGGTGT  480
481   GCTGATGTGA  CTACTAGACA  GAATTGGCAG  ATCCGTGGTG  TTGTGTTGCC  TGATGTGCCT  540
541   GAGATCTTGA  AAGGTCTTGC  TTCTGTTGGT  TTAACGAGTC  TTCAAAGTGG  TATGGATAAC  600
601   GTGAGGAACC  CGGTTGGGAA  TCCTATAGCT  GGGATTGATC  CGGAGGAGAT  TGTTGACACG  660
661   AGGCCTTACA  CGAATCTCCT  TTCGCAGTTT  ATCACCGCTA  ATTCACAAGG  AAACCCCGAT  720
721   TTCACCAACT  TGCCAAGAAA  GTGGAATGTG  TGTGTGGTGG  GGACTCATGA  TCTCTATGAG  780
781   CATCCACATA  TCAATGATTT  GGCCTACATG  CCTGCTAATA  AAGATGGACG  GTTTGGATTC  840
841   AATTTGCTTG  TGGGAGGATT  CTTTAGTCCC  AAAAGATGTG  AAGAAGCGAT  TCCTCTTGAT  900
901   GCTTGGGTCC  CTGCTGATGA  CGTTCTTCCA  CTCTGCAAAG  CTGTTCTAGA  GGCTTACAGA  960
961   GATCTTGGAA  CTCGAGGAAA  CCGACAGAAG  ACAAGAATGA  TGTGGCTTAT  CGACGAACTT  1020
1021  GGTGTTGAAG  GATTTAGAAC  TGAGGTAGAG  AAGAGAATGC  CAAATGGGAA  ACTCGAGAGA  1080
1081  GGATCTTCAG  AGGATCTTGT  GAACAAACAG  TGGGAGAGGA  GAGACTATTT  CGGAGTCAAC  1140
1141  CCTCAGAAAC  AAGAAGGTCT  TAGCTTCGTG  GGGCTTCACG  TTCCGGTTGG  TAGGCTACAA  1200
1201  GCTGATGACA  TGGATGAGCT  TGCTCGGTTA  GCTGATACCT  ACGGGTCAGG  TGAGCTAAGA  1260
1261  CTCACAGTAG  AGCAAAACAT  CATCATCCCA  AATGTAGAAA  CCTCGAAAAC  CGAAGCTTTG  1320
1321  CTTCAAGAGC  CGTTTCTCAA  GAACCGTTTC  TCCCCTGAAC  CATCTATCCT  AATGAAAGGC  1380
1381  TTAGTTGCTT  GTACCGGTAG  CCAGTTCTGC  GGACAAGCGA  TAATCGAGAC  TAAGCTAAGA  1440
1441  GCTTTAAAAG  TGACAGAAGA  AGTAGAGAGA  CTTGTATCTG  TGCCAAGACC  GATAAGGATG  1500
1501  CATTGGACAG  GATGTCCCAA  CACTTGCGGA  CAAGTCCAAG  TAGCAGATAT  CGGATTCATG  1560
1561  GGATGCTTAA  CACGAGGCGA  GGAAGGAAAG  CCAGTCGAGG  GTGCTGACGT  GTACGTCGGG  1620
1621  GGACGAATAG  GAAGTGACTC  GCATATCGGA  GAGATCTATA  AGAAAGGTGT  TCGTGTCACG  1680
1681  GAGTTGGTTC  CATTGGTGGC  TGAGATTCTG  ATCAAAGAAT  TTGGTGCTGT  GCCTAGAGAA  1740
1741  AGAGAAGAGA  ATGAAGATTG  A  1761

▼ KEYWORD

ID
Family
4Fe-4S
Chloroplast
Complete proteome
Electron transport
Heme
Iron
Iron-sulfur
Isopeptide bond
Metal-binding
Nitrate assimilation
Oxidoreductase
Plastid
Reference proteome
Repeat
Transit peptide
Transport
Ubl conjugation

▼ GENE ONTOLOGY

ID
Classification
Description
Cellular Component
Apoplast
Cellular Component
Chloroplast
Cellular Component
Chloroplast stroma
Cellular Component
Membrane
Cellular Component
Mitochondrion
Molecular Function
4 iron, 4 sulfur cluster binding
Molecular Function
Ferredoxin-nitrite reductase activity
Molecular Function
Heme binding
Molecular Function
Metal ion binding
Molecular Function
Nitrite reductase (NO-forming) activity
Biological Process
Nitrate assimilation
Biological Process
Response to nitrate

▼ KEGG


▼ ORTHOLOGY

DrLLPS IDOrganismIdentityE-valueScore
LLPS-Arl-0225Arabidopsis lyrata97.540.01147
LLPS-Brn-0543Brassica napus94.740.01120
LLPS-Brr-1416Brassica rapa94.560.01119
LLPS-Bro-1952Brassica oleracea94.390.01117
LLPS-Thc-1218Theobroma cacao83.860.0 940
LLPS-Coc-1521Corchorus capsularis83.810.0 984
LLPS-Prp-1063Prunus persica83.720.0 986
LLPS-Tru-1864Triticum urartu83.651e-164 480
LLPS-Pot-2265Populus trichocarpa83.450.01004
LLPS-Dac-2021Daucus carota83.070.0 976
LLPS-Gor-2374Gossypium raimondii82.750.0 991
LLPS-Mae-1855Manihot esculenta82.030.0 980
LLPS-Viv-1192Vitis vinifera81.520.0 960
LLPS-Hea-1650Helianthus annuus81.180.0 951
LLPS-Sot-0937Solanum tuberosum81.140.0 960
LLPS-Sol-2230Solanum lycopersicum80.960.0 957
LLPS-Nia-0327Nicotiana attenuata80.290.0 959
LLPS-Met-1759Medicago truncatula80.110.0 967
LLPS-Cus-2027Cucumis sativus79.890.0 941
LLPS-Phv-0386Phaseolus vulgaris79.510.0 941
LLPS-Glm-1908Glycine max79.260.0 957
LLPS-Via-1085Vigna angularis79.190.0 946
LLPS-Vir-1086Vigna radiata78.840.0 943
LLPS-Orb-0533Oryza barthii77.340.0 756
LLPS-Mua-1289Musa acuminata77.240.0 925
LLPS-Ori-2222Oryza indica76.990.0 890
LLPS-Orni-1364Oryza nivara76.990.0 892
LLPS-Sei-1635Setaria italica76.910.0 912
LLPS-Orbr-1340Oryza brachyantha76.870.0 883
LLPS-Tra-2510Triticum aestivum76.650.0 892
LLPS-Lep-2375Leersia perrieri76.490.0 884
LLPS-Orp-1748Oryza punctata76.20.0 887
LLPS-Sob-1701Sorghum bicolor76.160.0 915
LLPS-Orm-0533Oryza meridionalis75.697e-157 466
LLPS-Brd-2015Brachypodium distachyon75.550.0 882
LLPS-Orr-0234Oryza rufipogon74.760.0 806
LLPS-Zem-2206Zea mays74.560.0 904
LLPS-Org-1345Oryza glaberrima73.90.0 750
LLPS-Ors-1822Oryza sativa72.980.0 877
LLPS-Amt-1189Amborella trichopoda72.870.0 872
LLPS-Hov-0839Hordeum vulgare72.850.0 872
LLPS-Orgl-0720Oryza glumaepatula72.840.0 873
LLPS-Sem-1766Selaginella moellendorffii70.970.0 839
LLPS-Php-1787Physcomitrella patens68.90.0 826
LLPS-Osl-1318Ostreococcus lucimarinus54.430.0 602
LLPS-Chc-0003Chondrus crispus48.023e-165 491
LLPS-Chr-1703Chlamydomonas reinhardtii45.663e-152 458
LLPS-Gas-1066Galdieria sulphuraria42.137e-144 436
LLPS-Yal-1203Yarrowia lipolytica28.672e-1481.3
LLPS-Scj-1005Schizosaccharomyces japonicus26.634e-22 105
LLPS-Ved-1278Verticillium dahliae25.734e-21 102
LLPS-Pyt-0889Pyrenophora teres25.472e-1997.1
LLPS-Nec-0664Neurospora crassa25.393e-25 115
LLPS-Trr-0441Trichoderma reesei25.358e-22 104
LLPS-Scp-0209Schizosaccharomyces pombe25.338e-21 101
LLPS-Asn-1494Aspergillus nidulans25.274e-25 115
LLPS-Ast-0578Aspergillus terreus25.186e-26 117
LLPS-Gag-0465Gaeumannomyces graminis25.134e-24 112
LLPS-Pytr-1450Pyrenophora triticirepentis25.03e-1996.7
LLPS-Mao-1217Magnaporthe oryzae25.02e-22 107
LLPS-Nef-1238Neosartorya fischeri24.872e-25 116
LLPS-Zyt-1312Zymoseptoria tritici24.796e-21 102
LLPS-Abg-1705Absidia glauca24.761e-24 113
LLPS-Trv-1025Trichoderma virens24.668e-23 107
LLPS-Coo-0757Colletotrichum orbiculare24.563e-22 106
LLPS-Asfu-1658Aspergillus fumigatus24.557e-26 117
LLPS-Sac-0363Saccharomyces cerevisiae24.472e-1274.7
LLPS-Phn-0512Phaeosphaeria nodorum24.412e-1790.9
LLPS-Asf-1367Aspergillus flavus24.332e-22 106
LLPS-Lem-0561Leptosphaeria maculans24.322e-1894.0
LLPS-Map-1100Magnaporthe poae24.315e-22 105
LLPS-Miv-0630Microbotryum violaceum24.283e-21 102
LLPS-Aso-1431Aspergillus oryzae24.152e-22 106
LLPS-Asni-0995Aspergillus niger24.062e-22 107
LLPS-Scs-1147Sclerotinia sclerotiorum24.049e-23 107
LLPS-Cogr-0893Colletotrichum graminicola24.016e-22 105
LLPS-Scc-0916Schizosaccharomyces cryophilus24.011e-1998.2
LLPS-Fuv-1583Fusarium verticillioides23.889e-1995.1
LLPS-Usm-0572Ustilago maydis23.753e-1687.0
LLPS-Cym-0573Cyanidioschyzon merolae23.741e-22 106
LLPS-Tum-0901Tuber melanosporum23.584e-1996.3
LLPS-Dos-0829Dothistroma septosporum23.572e-20 100
LLPS-Kop-1120Komagataella pastoris23.452e-20 100
LLPS-Fuo-0096Fusarium oxysporum23.44e-1892.8
LLPS-Asc-0207Aspergillus clavatus23.321e-22 107
LLPS-Beb-1216Beauveria bassiana23.287e-21 102
LLPS-Asg-1389Ashbya gossypii23.084e-1686.3
LLPS-Fus-0395Fusarium solani22.382e-1894.4
LLPS-Spr-1560Sporisorium reilianum21.523e-1687.0
LLPS-Crn-1262Cryptococcus neoformans21.078e-1479.3