LLPS-Art-0323
HON4
▼ OVERVIEW
| Status: | Reviewed |
| Protein Name: | At3g18035 |
| Gene Name: | HON4, HISTONE H1, At3g18035 |
| Ensembl Gene: | AT3G18035 |
| Ensembl Protein: | AT3G18035.2 |
| Organism: | Arabidopsis thaliana |
| Taxa ID: | 3702 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Description | Tissue/Cell | PMIDs |
|---|---|---|---|
| Nucleolus | "...We identified 1602 proteins in the nucleolar and 2544 proteins in the nuclear fraction with an overlap of 1429 proteins." | Arabidopsis thaliana cells | 26980300 |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | AT3G18035.2 | AT3G18035.2 |
| Ensembl | AT3G18035.1 | AT3G18035.1 |
| UniProt | Q9LSK7, Q9LSK7_ARATH | |
| GeneBank | AB026641, CP002686, BT002434, BT006606, AB020749 | AEE76037.1, AAP31950.1, BAB01332.1, AAO00794.1 |
| RefSeq | NM_112685.4 | NP_188431.3 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MDPSLGDPHH PPQFTPFPHF PTSNHHPLGP NPYNNHVVFQ PQPQTQTQIP QPQMFQLSPH 60 61 VSMPHPPYSE MICAAIAALN EPDGSSKMAI SRYIERCYTG LTSAHAALLT HHLKTLKTSG 120 121 VLSMVKKSYK IAGSSTPPAS VAVAAAAAAQ GLDVPRSEIL HSSNNDPMAS GSASQPLKRG 180 181 RGRPPKPKPE SQPQPLQQLP PTNQVQANGQ PIWEQQQVQS PVPVPTPVTE SAKRGPGRPR 240 241 KNGSAAPATA PIVQASVMAG IMKRRGRPPG RRAAGRQRKP KSVSSTASVY PYVANGARRR 300 301 GRPRRVVDPS SIVSVAPVGG ENVAAVAPGM KRGRGRPPKI GGVISRLIMK PKRGRGRPVG 360 361 RPRKIGTSVT TGTQDSGELK KKFDIFQEKV KEIVKVLKDG VTSENQAVVQ AIKDLEALTV 420 421 TETVEPQVME EVQPEETAAP QTEAQQTEAA ETQGGQEEGQ EREGETQTQT EAEAMQEALF 480 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGATCCAT CTCTTGGTGA TCCTCATCAT CCTCCTCAGT TCACCCCTTT TCCTCATTTT 60 61 CCCACCTCCA ATCATCATCC TTTAGGACCA AATCCGTACA ATAACCATGT CGTCTTCCAA 120 121 CCGCAGCCGC AAACGCAAAC GCAAATCCCG CAACCGCAGA TGTTTCAGTT ATCTCCACAT 180 181 GTTTCAATGC CCCACCCTCC TTACTCCGAA ATGATTTGCG CTGCGATTGC GGCGTTAAAC 240 241 GAACCGGATG GTTCGAGCAA GATGGCAATT TCGAGATACA TCGAGAGATG TTACACCGGT 300 301 TTAACTTCTG CTCATGCTGC TTTGTTGACT CACCATCTCA AGACTTTGAA GACCAGTGGT 360 361 GTTCTTTCTA TGGTTAAGAA ATCTTACAAA ATTGCTGGTT CTTCTACTCC TCCTGCTAGT 420 421 GTAGCTGTTG CTGCTGCTGC CGCCGCTCAA GGTCTCGATG TTCCCAGATC TGAGATTCTC 480 481 CATTCAAGTA ACAACGATCC CATGGCTTCT GGCTCTGCTT CTCAGCCTCT GAAACGAGGT 540 541 CGTGGTCGTC CTCCTAAGCC TAAACCTGAA TCTCAACCAC AACCACTACA GCAACTTCCA 600 601 CCGACCAATC AAGTCCAGGC TAACGGACAG CCAATCTGGG AACAGCAGCA AGTTCAATCA 660 661 CCTGTTCCGG TTCCGACTCC GGTTACAGAG TCGGCGAAGA GAGGACCTGG TCGTCCAAGG 720 721 AAGAACGGTT CTGCTGCTCC TGCTACTGCA CCAATCGTTC AAGCTTCGGT TATGGCTGGA 780 781 ATTATGAAAC GTAGAGGTAG ACCACCGGGT CGTCGAGCTG CTGGGAGACA GAGGAAGCCC 840 841 AAATCCGTTT CTTCTACTGC CTCTGTGTAT CCTTATGTTG CTAATGGTGC TAGACGCAGA 900 901 GGAAGGCCTA GGAGAGTTGT TGACCCTAGC AGTATTGTTA GTGTTGCTCC AGTAGGTGGT 960 961 GAAAATGTGG CAGCGGTTGC GCCAGGGATG AAGCGTGGAC GTGGACGACC ACCTAAGATT 1020 1021 GGTGGTGTTA TCAGTAGGCT TATTATGAAG CCTAAGAGAG GACGAGGACG TCCTGTAGGT 1080 1081 AGACCCAGAA AGGTAAATTT TCACATCCCC CAATTCTGTA TTCGTGATCT CGATTTTGCA 1140 1141 ATATCTGACG TTTACTGTGC ATGA 1164 |
▼ ANNOTATION
| Disorder | ||||
| IUPred2A | ||||
| Interaction | ||||
| HINT | ||||
| Physicochemical | ||||
| Compute pI/Mw | AAindex | |||
| Localization | ||||
| COMPARTMENTS | ||||
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Arl-1119 | Arabidopsis lyrata | 83.88 | 7e-105 | 328 |
| LLPS-Mae-1196 | Manihot esculenta | 68.57 | 3e-09 | 63.2 |
| LLPS-Met-1221 | Medicago truncatula | 67.57 | 2e-06 | 54.7 |
| LLPS-Brn-0501 | Brassica napus | 64.62 | 2e-37 | 147 |
| LLPS-Thc-1942 | Theobroma cacao | 63.16 | 1e-08 | 60.8 |
| LLPS-Brr-2144 | Brassica rapa | 62.27 | 2e-33 | 135 |
| LLPS-Bro-0014 | Brassica oleracea | 61.64 | 6e-39 | 152 |
| LLPS-Glm-2743 | Glycine max | 61.43 | 2e-08 | 60.1 |
| LLPS-Phv-1872 | Phaseolus vulgaris | 60.0 | 7e-09 | 62.0 |
| LLPS-Hea-0917 | Helianthus annuus | 59.7 | 7e-07 | 55.5 |
| LLPS-Via-1575 | Vigna angularis | 58.67 | 9e-09 | 61.6 |
| LLPS-Vir-1457 | Vigna radiata | 58.67 | 9e-09 | 61.6 |
| LLPS-Gor-0961 | Gossypium raimondii | 57.14 | 3e-07 | 57.0 |