LLPS-Art-0149
APX3
▼ OVERVIEW
Status: | Reviewed |
Protein Name: | L-ascorbate peroxidase 3 |
Gene Name: | APX3, APX, APXIII, At4g35000, M4E13.60 |
Ensembl Gene: | AT4G35000 |
Ensembl Protein: | AT4G35000.1 |
Organism: | Arabidopsis thaliana |
Taxa ID: | 3702 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Description | Tissue/Cell | PMIDs |
---|---|---|---|
Nucleolus | "...We identified 1602 proteins in the nucleolar and 2544 proteins in the nuclear fraction with an overlap of 1429 proteins." | Arabidopsis thaliana cells | 26980300 |
▼ FUNCTION
Plays a key role in hydrogen peroxide removal. |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | AT4G35000.1 | AT4G35000.1 |
UniProt | Q42564, APX3_ARATH, O81810 | |
GeneBank | U69138, AY081646, AL022023, AL161586, AY086162, AY065143, X98003, X98276, CP002687, AJ006030 | CAB80217.1, AEE86445.1, CAA66926.1, CAA06823.1, AAM10208.1, AAB71493.1, AAM63367.1, CAA17765.1, AAL38319.1, CAA66640.1 |
RefSeq | NM_119666.4 | NP_195226.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MAAPIVDAEY LKEITKARRE LRSLIANKNC APIMLRLAWH DAGTYDAQSK TGGPNGSIRN 60 61 EEEHTHGANS GLKIALDLCE GVKAKHPKIT YADLYQLAGV VAVEVTGGPD IVFVPGRKDS 120 121 NVCPKEGRLP DAKQGFQHLR DVFYRMGLSD KDIVALSGGH TLGRAHPERS GFDGPWTQEP 180 181 LKFDNSYFVE LLKGESEGLL KLPTDKTLLE DPEFRRLVEL YAKDEDAFFR DYAESHKKLS 240 241 ELGFNPNSSA GKAVADSTIL AQSAFGVAVA AAVVAFGYFY EIRKRMK 287 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGCTGCAC CGATTGTTGA TGCGGAGTAC TTGAAAGAGA TCACTAAGGC TCGCCGTGAG 60 61 CTCCGTTCTC TCATCGCGAA CAAGAACTGT GCTCCTATCA TGCTCCGATT GGCATGGCAC 120 121 GATGCTGGAA CCTATGATGC TCAATCGAAG ACCGGTGGAC CTAATGGCTC TATCAGGAAC 180 181 GAAGAAGAGC ACACTCATGG TGCCAACAGT GGTTTGAAGA TCGCTCTCGA TCTCTGTGAG 240 241 GGCGTGAAAG CTAAGCATCC CAAAATCACA TACGCAGACC TGTATCAGCT TGCTGGTGTG 300 301 GTAGCAGTTG AGGTTACTGG TGGACCTGAC ATCGTGTTCG TTCCCGGGAG AAAGGATTCA 360 361 AATGTCTGCC CCAAGGAAGG AAGACTTCCT GATGCCAAAC AAGGTTTCCA ACATCTCAGA 420 421 GATGTCTTCT ACCGCATGGG ACTATCTGAT AAGGATATTG TGGCACTCTC AGGGGGTCAT 480 481 ACTCTGGGAA GGGCTCACCC GGAGAGGTCA GGCTTTGATG GACCATGGAC CCAAGAGCCG 540 541 CTGAAGTTTG ACAACTCCTA CTTCGTGGAA CTGCTGAAAG GAGAATCAGA GGGCTTGTTG 600 601 AAACTTCCAA CTGACAAGAC CTTATTGGAA GACCCGGAGT TCCGTCGTCT TGTTGAGCTT 660 661 TATGCAAAGG ATGAAGATGC ATTCTTCAGA GACTACGCGG AATCGCACAA GAAACTCTCT 720 721 GAGCTTGGTT TCAACCCAAA CTCCTCAGCA GGCAAAGCAG TTGCAGACAG CACGATTCTG 780 781 GCACAGAGTG CGTTCGGGGT TGCAGTTGCT GCTGCGGTTG TGGCATTTGG TTACTTTTAC 840 841 GAGATCCGGA AGAGGATGAA GTAA 864 |
▼ KEYWORD
ID | Family |
Acetylation | |
Calcium | |
Complete proteome | |
Glyoxysome | |
Heme | |
Hydrogen peroxide | |
Iron | |
Membrane | |
Metal-binding | |
Oxidoreductase | |
Peroxidase | |
Peroxisome | |
Potassium | |
Reference proteome | |
Transmembrane | |
Transmembrane helix
|
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Chloroplast | |
Cellular Component | Chloroplast envelope | |
Cellular Component | Glyoxysomal membrane | |
Cellular Component | Integral component of membrane | |
Cellular Component | Mitochondrion | |
Cellular Component | Peroxisomal membrane | |
Cellular Component | Peroxisome | |
Cellular Component | Plasmodesma | |
Cellular Component | Plastid | |
Cellular Component | Vacuolar membrane | |
Cellular Component | Vacuole | |
Molecular Function | Heme binding | |
Molecular Function | L-ascorbate peroxidase activity | |
Molecular Function | Metal ion binding | |
Molecular Function | Peroxidase activity | |
Biological Process | Cellular response to oxidative stress | |
Biological Process | Hydrogen peroxide catabolic process | |
Biological Process | Response to cytokinin | |
Biological Process | Response to oxidative stress | |
Biological Process | Response to reactive oxygen species |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Arl-0639 | Arabidopsis lyrata | 98.26 | 0.0 | 518 |
LLPS-Bro-2214 | Brassica oleracea | 90.94 | 2e-175 | 493 |
LLPS-Brn-1836 | Brassica napus | 90.24 | 6e-176 | 494 |
LLPS-Brr-2777 | Brassica rapa | 89.9 | 1e-175 | 494 |
LLPS-Sol-0150 | Solanum lycopersicum | 85.02 | 7e-160 | 454 |
LLPS-Gor-1695 | Gossypium raimondii | 84.72 | 3e-160 | 455 |
LLPS-Thc-1732 | Theobroma cacao | 84.72 | 5e-159 | 452 |
LLPS-Sot-0722 | Solanum tuberosum | 84.67 | 9e-160 | 454 |
LLPS-Nia-2248 | Nicotiana attenuata | 84.32 | 2e-154 | 454 |
LLPS-Coc-2111 | Corchorus capsularis | 83.97 | 8e-156 | 444 |
LLPS-Mae-1841 | Manihot esculenta | 82.23 | 9e-153 | 436 |
LLPS-Pot-2395 | Populus trichocarpa | 82.17 | 1e-152 | 435 |
LLPS-Cus-1302 | Cucumis sativus | 81.5 | 1e-131 | 381 |
LLPS-Viv-0807 | Vitis vinifera | 80.28 | 3e-152 | 439 |
LLPS-Via-0565 | Vigna angularis | 79.86 | 3e-152 | 435 |
LLPS-Mua-2272 | Musa acuminata | 79.79 | 2e-148 | 425 |
LLPS-Phv-1967 | Phaseolus vulgaris | 79.51 | 3e-151 | 432 |
LLPS-Zem-1338 | Zea mays | 79.44 | 3e-138 | 398 |
LLPS-Prp-0006 | Prunus persica | 79.37 | 6e-145 | 416 |
LLPS-Glm-1850 | Glycine max | 78.82 | 1e-149 | 428 |
LLPS-Met-0253 | Medicago truncatula | 78.12 | 1e-149 | 428 |
LLPS-Amt-0847 | Amborella trichopoda | 77.51 | 1e-144 | 416 |
LLPS-Sob-2179 | Sorghum bicolor | 77.16 | 2e-145 | 417 |
LLPS-Hea-1645 | Helianthus annuus | 77.0 | 2e-146 | 420 |
LLPS-Sei-1903 | Setaria italica | 76.74 | 2e-145 | 417 |
LLPS-Tra-1775 | Triticum aestivum | 76.63 | 7e-146 | 419 |
LLPS-Hov-0939 | Hordeum vulgare | 76.29 | 2e-143 | 416 |
LLPS-Orp-0349 | Oryza punctata | 75.95 | 3e-142 | 409 |
LLPS-Ors-0682 | Oryza sativa | 75.95 | 7e-142 | 409 |
LLPS-Org-1995 | Oryza glaberrima | 75.95 | 7e-142 | 409 |
LLPS-Orr-1599 | Oryza rufipogon | 75.95 | 7e-142 | 409 |
LLPS-Orni-1262 | Oryza nivara | 75.95 | 7e-142 | 409 |
LLPS-Orb-1977 | Oryza barthii | 75.95 | 7e-142 | 409 |
LLPS-Ori-1291 | Oryza indica | 75.95 | 7e-142 | 409 |
LLPS-Orgl-2366 | Oryza glumaepatula | 75.95 | 7e-142 | 409 |
LLPS-Tru-1149 | Triticum urartu | 75.78 | 2e-142 | 409 |
LLPS-Orbr-1966 | Oryza brachyantha | 75.26 | 1e-139 | 403 |
LLPS-Lep-2310 | Leersia perrieri | 75.26 | 3e-141 | 407 |
LLPS-Brd-2203 | Brachypodium distachyon | 75.0 | 4e-141 | 406 |
LLPS-Orm-1999 | Oryza meridionalis | 74.57 | 5e-139 | 401 |
LLPS-Sem-1866 | Selaginella moellendorffii | 71.53 | 3e-131 | 382 |
LLPS-Php-2139 | Physcomitrella patens | 68.12 | 2e-128 | 375 |
LLPS-Vir-1885 | Vigna radiata | 68.05 | 2e-140 | 409 |
LLPS-Dac-2363 | Daucus carota | 67.58 | 3e-136 | 395 |
LLPS-Put-0393 | Puccinia triticina | 48.91 | 1e-21 | 94.0 |
LLPS-Blg-1569 | Blumeria graminis | 47.84 | 2e-60 | 202 |
LLPS-Mel-0997 | Melampsora laricipopulina | 47.13 | 2e-62 | 206 |
LLPS-Abg-1988 | Absidia glauca | 46.35 | 1e-55 | 187 |
LLPS-Gas-0625 | Galdieria sulphuraria | 45.85 | 2e-64 | 213 |
LLPS-Spr-0167 | Sporisorium reilianum | 45.67 | 1e-59 | 199 |
LLPS-Fuo-1569 | Fusarium oxysporum | 45.53 | 3e-62 | 207 |
LLPS-Fuv-0948 | Fusarium verticillioides | 45.53 | 2e-62 | 207 |
LLPS-Chr-0061 | Chlamydomonas reinhardtii | 45.49 | 1e-59 | 199 |
LLPS-Miv-1060 | Microbotryum violaceum | 44.62 | 1e-63 | 209 |
LLPS-Dos-1250 | Dothistroma septosporum | 42.03 | 9e-62 | 204 |
LLPS-Osl-1470 | Ostreococcus lucimarinus | 41.3 | 9e-48 | 167 |
LLPS-Yal-0181 | Yarrowia lipolytica | 39.38 | 4e-51 | 176 |
LLPS-Kop-1379 | Komagataella pastoris | 35.13 | 7e-45 | 162 |
LLPS-Sac-1541 | Saccharomyces cerevisiae | 34.63 | 2e-41 | 152 |