LLPS-Art-0125
NOF1
▼ OVERVIEW
Status: | Reviewed |
Protein Name: | U3 small nucleolar RNA-associated protein |
Gene Name: | NOF1, nucleolar factor 1, At1g17690, F11A6.3, F11A6_3 |
Ensembl Gene: | AT1G17690 |
Ensembl Protein: | AT1G17690.1 |
Organism: | Arabidopsis thaliana |
Taxa ID: | 3702 |
LLPS Type: | Client |
▼ Classification
Condensates:
Condensate | Description | Tissue/Cell | PMIDs |
---|---|---|---|
Nucleolus | "...We identified 1602 proteins in the nucleolar and 2544 proteins in the nuclear fraction with an overlap of 1429 proteins." | Arabidopsis thaliana cells | 26980300 |
Nucleolus | "...Comparative analysis revealed that 562 proteins were consistently identified in both experimental data sets." | 3 weeks-old Arabidopsis thaliana plants | 29104584 |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | AT1G17690.1 | AT1G17690.1 |
UniProt | Q8H1E7, Q8H1E7_ARATH | |
GeneBank | AY150441, CP002684 | AAN12983.1, AEE29622.1 |
RefSeq | NM_101631.2 | NP_564032.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MAPNATGVLK RHRSHEKFDK KRDTKKHKHV EKTIVSNPST DSPEESSIEA ESEAMVYREP 60 61 TQYQNLLVSL GSSNKVVADM NKRRQREEEG KSDTEEDEDD EDEDEEENSG SDDLSSTDGE 120 121 DDKSQGDDQE TLGGLTDDTQ EDNDNQSEEE DPDDYETDEE VHELSTNGQS FVDASSSISA 180 181 FSEHLSHKLS SEEVETLPKG KWKFKWESPA FDMPNCKWKG TSENFLDGIQ SDAPYGLKPK 240 241 LYNHWLQLYK KCGGKDLDSS KRRKFFSICN SYLDILHSNK KPFYHCGSDE DSSAMDAYLM 300 301 HSLNHIFKTR DLVKKNESKI AKHRETSEEE ILSDDGFLDQ GFTRPKVLIL LPLRSIAFRV 360 361 VKRLIQLTPE SQRVNVEHLD RFNDEFGCEE DTDDCDGEKT TSKNGNSIKQ KSSKPSDWQA 420 421 LFGANNNDDE FMLGIKHTRK SIRLYGDFYS SDIIVASPLK LHMAIGAAEE NKERDVDYLS 480 481 SIEVLVIDHA DIISMQNWSF LATVVDYLNR LPTKQHGTNV MRIRPLYLDG HARFYRQSII 540 541 LSSYLTPEMN SLFGRHCLNY KGKMKMACEY KGVLEKVLLP VRQIYERFDA ASITQVDDAR 600 601 LEYFTKKIFP KIKDSVQGGV MIFIHSYFEF VRLRNFLNTQ NTSFCLLGDY AKNADISRAR 660 661 EQFFVGSRKI MLYTERAYFY KRYKIRGIKN LILYSLPERK EFYPEIMNML EEGSHDMMST 720 721 ALFSRFDMLQ LERIVGSTSA KRMITSEKNM FAFC 754 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGCTCCAA ACGCTACTGG AGTCTTGAAG AGGCACAGGT CCCATGAGAA ATTCGATAAG 60 61 AAACGAGATA CGAAGAAGCA CAAACATGTT GAAAAGACGA TTGTTTCCAA TCCTTCAACA 120 121 GATTCACCTG AAGAATCCTC TATAGAGGCT GAATCGGAAG CAATGGTTTA CAGAGAACCG 180 181 ACACAGTACC AAAATTTGCT GGTGTCTCTT GGTTCATCTA ACAAGGTTGT TGCTGATATG 240 241 AACAAAAGAA GGCAGAGAGA GGAAGAAGGT AAAAGTGACA CAGAAGAAGA TGAGGACGAT 300 301 GAAGATGAGG ATGAGGAGGA AAACAGTGGG TCTGACGATT TAAGCTCTAC TGATGGGGAG 360 361 GATGATAAGA GTCAAGGGGA TGATCAGGAA ACTCTCGGAG GTCTTACGGA CGACACGCAG 420 421 GAAGACAATG ATAATCAGAG TGAGGAAGAA GATCCTGACG ACTATGAAAC GGATGAGGAG 480 481 GTGCATGAGT TGAGTACCAA TGGCCAATCC TTTGTAGATG CTTCTTCATC TATTAGTGCA 540 541 TTTAGTGAGC ACCTTAGCCA CAAATTATCC AGTGAAGAAG TGGAAACTTT ACCAAAAGGC 600 601 AAGTGGAAGT TTAAATGGGA ATCACCTGCC TTTGACATGC CAAATTGCAA ATGGAAAGGA 660 661 ACGAGTGAAA ATTTTCTTGA TGGTATTCAG AGTGATGCAC CTTACGGCCT CAAGCCGAAG 720 721 TTATATAATC ACTGGCTGCA ATTGTACAAA AAATGTGGAG GCAAAGATTT GGACTCATCT 780 781 AAGAGGAGAA AATTCTTCTC TATTTGCAAC AGCTATCTGG ATATATTGCA TTCTAACAAG 840 841 AAACCCTTTT ACCATTGTGG CTCTGACGAA GACTCAAGTG CCATGGATGC GTACCTTATG 900 901 CATTCTTTGA ATCACATCTT TAAAACTAGA GATCTAGTGA AGAAGAATGA AAGTAAAATC 960 961 GCCAAGCATC GAGAGACCTC CGAAGAAGAA ATTCTTTCTG ATGATGGATT TCTGGACCAA 1020 1021 GGATTTACTC GTCCAAAGGT CCTGATTCTA TTACCATTGA GGAGCATTGC CTTTCGCGTT 1080 1081 GTTAAGAGGC TCATACAACT AACTCCGGAA TCTCAAAGGG TTAATGTAGA ACACCTTGAC 1140 1141 CGGTTTAATG ATGAGTTTGG ATGTGAAGAG GATACTGATG ACTGTGATGG TGAAAAGACT 1200 1201 ACATCGAAAA ATGGAAACTC AATCAAACAA AAGTCTTCAA AACCTTCTGA CTGGCAAGCC 1260 1261 CTTTTTGGTG CGAATAACAA CGATGATGAG TTTATGTTAG GCATTAAACA TACAAGGAAG 1320 1321 AGTATTAGGC TATATGGTGA TTTTTATTCC TCAGACATTA TAGTTGCTTC CCCTCTCAAG 1380 1381 TTACATATGG CCATTGGTGC AGCAGAAGAA AACAAGGAAC GGGATGTTGA TTATCTTTCT 1440 1441 TCCATAGAGG TTTTGGTTAT CGATCATGCA GACATAATAT CTATGCAGAA TTGGTCGTTC 1500 1501 CTTGCTACAG TCGTTGACTA CTTAAATAGA TTGCCAACAA AACAACATGG AACCAATGTC 1560 1561 ATGCGAATTC GGCCGTTGTA TCTGGATGGA CATGCAAGGT TTTATCGCCA GTCAATAATT 1620 1621 CTAAGTTCTT ATTTAACTCC GGAGATGAAT TCTCTATTCG GTCGCCACTG CTTGAACTAT 1680 1681 AAGGGAAAGA TGAAGATGGC GTGTGAATAC AAGGGTGTTC TTGAGAAAGT GTTGCTCCCT 1740 1741 GTCCGTCAGA TTTATGAAAG ATTTGATGCA GCCTCCATAA CCCAAGTGGA CGATGCACGT 1800 1801 CTTGAATATT TTACCAAAAA GATTTTCCCA AAGATTAAAG ATTCTGTTCA GGGAGGAGTA 1860 1861 ATGATCTTTA TCCATTCTTA CTTCGAGTTC GTCAGGCTTA GAAACTTTTT GAATACGCAG 1920 1921 AATACCTCTT TCTGTCTTCT TGGAGATTAT GCAAAAAATG CAGATATATC CCGAGCAAGA 1980 1981 GAACAGTTTT TTGTAGGGAG CCGAAAGATC ATGCTTTACA CTGAGAGAGC ATACTTTTAT 2040 2041 AAGAGATACA AGATCCGTGG TATAAAGAAC TTAATCTTAT ATTCTCTTCC GGAGCGGAAG 2100 2101 GAGTTTTACC CTGAGATAAT GAACATGCTT GAAGAAGGAT CACATGACAT GATGTCCACT 2160 2161 GCACTTTTTT CTCGTTTTGA TATGCTCCAG CTGGAAAGGA TCGTTGGCTC TACTTCCGCA 2220 2221 AAGAGAATGA TCACTTCTGA GAAGAACATG TTTGCTTTCT GTTAA 2265 |
▼ ANNOTATION
Disorder | ||||
IUPred2A |
Interaction | ||||
HINT |
Physicochemical | ||||
Compute pI/Mw | AAindex |
Localization | ||||
COMPARTMENTS |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Arl-0647 | Arabidopsis lyrata | 87.71 | 0.0 | 1194 |
LLPS-Brr-1907 | Brassica rapa | 78.22 | 0.0 | 1057 |
LLPS-Brn-0634 | Brassica napus | 77.62 | 0.0 | 1067 |
LLPS-Bro-0237 | Brassica oleracea | 76.49 | 0.0 | 1075 |
LLPS-Gor-1180 | Gossypium raimondii | 66.85 | 0.0 | 770 |
LLPS-Nia-1331 | Nicotiana attenuata | 64.71 | 2e-180 | 529 |
LLPS-Mae-0006 | Manihot esculenta | 63.96 | 0.0 | 783 |
LLPS-Mua-1462 | Musa acuminata | 62.72 | 0.0 | 714 |
LLPS-Cus-1256 | Cucumis sativus | 62.63 | 0.0 | 714 |
LLPS-Prp-1128 | Prunus persica | 62.42 | 0.0 | 744 |
LLPS-Orm-1484 | Oryza meridionalis | 62.21 | 2e-66 | 225 |
LLPS-Viv-1256 | Vitis vinifera | 62.16 | 0.0 | 817 |
LLPS-Pot-1581 | Populus trichocarpa | 61.55 | 0.0 | 734 |
LLPS-Glm-0765 | Glycine max | 61.05 | 0.0 | 691 |
LLPS-Hov-0141 | Hordeum vulgare | 60.78 | 4e-121 | 372 |
LLPS-Hea-0303 | Helianthus annuus | 59.36 | 0.0 | 678 |
LLPS-Coc-0201 | Corchorus capsularis | 58.81 | 0.0 | 736 |
LLPS-Amt-1606 | Amborella trichopoda | 58.8 | 0.0 | 669 |
LLPS-Thc-0942 | Theobroma cacao | 58.61 | 0.0 | 772 |
LLPS-Phv-1936 | Phaseolus vulgaris | 57.67 | 0.0 | 676 |
LLPS-Sol-1378 | Solanum lycopersicum | 57.67 | 0.0 | 664 |
LLPS-Dac-1401 | Daucus carota | 55.73 | 0.0 | 679 |
LLPS-Met-0350 | Medicago truncatula | 55.18 | 0.0 | 635 |
LLPS-Orbr-0944 | Oryza brachyantha | 54.21 | 0.0 | 600 |
LLPS-Vir-1154 | Vigna radiata | 54.05 | 0.0 | 588 |
LLPS-Ors-0486 | Oryza sativa | 53.78 | 0.0 | 592 |
LLPS-Org-0204 | Oryza glaberrima | 53.78 | 0.0 | 590 |
LLPS-Via-0863 | Vigna angularis | 53.33 | 1e-152 | 463 |
LLPS-Sei-0618 | Setaria italica | 53.08 | 0.0 | 595 |
LLPS-Sob-0012 | Sorghum bicolor | 51.87 | 0.0 | 596 |
LLPS-Tra-1900 | Triticum aestivum | 51.41 | 0.0 | 590 |
LLPS-Brd-0137 | Brachypodium distachyon | 51.25 | 7e-176 | 526 |
LLPS-Zem-0825 | Zea mays | 51.01 | 0.0 | 583 |
LLPS-Php-1179 | Physcomitrella patens | 49.04 | 9e-172 | 521 |
LLPS-Ori-1550 | Oryza indica | 49.0 | 2e-169 | 507 |
LLPS-Orp-0929 | Oryza punctata | 48.23 | 2e-68 | 241 |
LLPS-Sem-0589 | Selaginella moellendorffii | 47.58 | 2e-172 | 518 |
LLPS-Orni-0159 | Oryza nivara | 47.47 | 4e-152 | 464 |
LLPS-Orr-1868 | Oryza rufipogon | 45.34 | 1e-143 | 442 |
LLPS-Orb-0648 | Oryza barthii | 45.34 | 5e-143 | 440 |
LLPS-Orgl-0896 | Oryza glumaepatula | 45.04 | 1e-145 | 447 |
LLPS-Lep-0519 | Leersia perrieri | 44.69 | 1e-134 | 416 |
LLPS-Chr-1219 | Chlamydomonas reinhardtii | 44.2 | 5e-114 | 379 |
LLPS-Tru-0275 | Triticum urartu | 41.6 | 7e-151 | 464 |
LLPS-Mao-1437 | Magnaporthe oryzae | 40.0 | 7e-106 | 347 |
LLPS-Nef-0176 | Neosartorya fischeri | 39.88 | 2e-104 | 343 |
LLPS-Gag-1170 | Gaeumannomyces graminis | 39.71 | 8e-107 | 349 |
LLPS-Asfu-0868 | Aspergillus fumigatus | 39.11 | 6e-103 | 337 |
LLPS-Scp-1372 | Schizosaccharomyces pombe | 39.01 | 3e-100 | 330 |
LLPS-Asf-0649 | Aspergillus flavus | 38.94 | 2e-44 | 164 |
LLPS-Nec-1121 | Neurospora crassa | 38.77 | 8e-106 | 347 |
LLPS-Osl-0163 | Ostreococcus lucimarinus | 38.57 | 4e-109 | 347 |
LLPS-Asni-1186 | Aspergillus niger | 38.31 | 1e-98 | 327 |
LLPS-Scc-0731 | Schizosaccharomyces cryophilus | 38.28 | 1e-101 | 333 |
LLPS-Map-0460 | Magnaporthe poae | 38.25 | 4e-104 | 342 |
LLPS-Icp-2203 | Ictalurus punctatus | 38.2 | 8e-97 | 323 |
LLPS-Fuv-1205 | Fusarium verticillioides | 38.17 | 3e-100 | 329 |
LLPS-Fuo-0951 | Fusarium oxysporum | 38.03 | 2e-101 | 335 |
LLPS-Ved-0550 | Verticillium dahliae | 37.95 | 7e-84 | 288 |
LLPS-Cog-0554 | Colletotrichum gloeosporioides | 37.92 | 8e-102 | 336 |
LLPS-Coo-0130 | Colletotrichum orbiculare | 37.84 | 2e-102 | 338 |
LLPS-Beb-0294 | Beauveria bassiana | 37.8 | 8e-100 | 329 |
LLPS-Pes-0208 | Pelodiscus sinensis | 37.65 | 1e-102 | 340 |
LLPS-Leo-2393 | Lepisosteus oculatus | 37.63 | 2e-94 | 317 |
LLPS-Tar-0571 | Takifugu rubripes | 37.55 | 1e-92 | 312 |
LLPS-Ast-0849 | Aspergillus terreus | 37.53 | 3e-94 | 316 |
LLPS-Scj-0845 | Schizosaccharomyces japonicus | 37.52 | 5e-108 | 350 |
LLPS-Blg-1186 | Blumeria graminis | 37.37 | 7e-101 | 334 |
LLPS-Abg-0069 | Absidia glauca | 37.22 | 1e-107 | 351 |
LLPS-Fus-0120 | Fusarium solani | 37.2 | 6e-102 | 336 |
LLPS-Asm-0639 | Astyanax mexicanus | 37.17 | 5e-104 | 334 |
LLPS-Ora-0709 | Ornithorhynchus anatinus | 37.07 | 5e-102 | 337 |
LLPS-Lac-0542 | Latimeria chalumnae | 37.05 | 1e-103 | 342 |
LLPS-Asn-0418 | Aspergillus nidulans | 37.04 | 2e-98 | 326 |
LLPS-Scf-1643 | Scleropages formosus | 36.93 | 1e-99 | 331 |
LLPS-Orn-1994 | Oreochromis niloticus | 36.92 | 2e-96 | 323 |
LLPS-Anc-1249 | Anolis carolinensis | 36.88 | 2e-95 | 320 |
LLPS-Trv-1053 | Trichoderma virens | 36.82 | 2e-101 | 333 |
LLPS-Aso-0678 | Aspergillus oryzae | 36.81 | 6e-103 | 339 |
LLPS-Usm-0277 | Ustilago maydis | 36.73 | 5e-86 | 293 |
LLPS-Lem-1129 | Leptosphaeria maculans | 36.58 | 4e-87 | 297 |
LLPS-Asc-1037 | Aspergillus clavatus | 36.52 | 4e-102 | 336 |
LLPS-Trr-1010 | Trichoderma reesei | 36.5 | 1e-101 | 335 |
LLPS-Sah-0475 | Sarcophilus harrisii | 36.26 | 2e-102 | 332 |
LLPS-Tum-0860 | Tuber melanosporum | 36.17 | 8e-97 | 321 |
LLPS-Dar-3418 | Danio rerio | 36.07 | 1e-99 | 331 |
LLPS-Mod-1742 | Monodelphis domestica | 36.07 | 1e-99 | 332 |
LLPS-Cogr-0681 | Colletotrichum graminicola | 36.07 | 1e-102 | 338 |
LLPS-Fud-2049 | Fukomys damarensis | 35.84 | 1e-96 | 323 |
LLPS-Loa-0602 | Loxodonta africana | 35.71 | 2e-98 | 328 |
LLPS-Caf-1688 | Canis familiaris | 35.66 | 9e-101 | 331 |
LLPS-Fia-1724 | Ficedula albicollis | 35.55 | 3e-102 | 338 |
LLPS-Mam-2409 | Macaca mulatta | 35.52 | 1e-95 | 320 |
LLPS-Maf-2146 | Macaca fascicularis | 35.52 | 6e-96 | 321 |
LLPS-Dio-1098 | Dipodomys ordii | 35.52 | 1e-99 | 327 |
LLPS-Scm-0776 | Scophthalmus maximus | 35.5 | 4e-95 | 319 |
LLPS-Orl-2419 | Oryzias latipes | 35.48 | 7e-93 | 313 |
LLPS-Spr-0375 | Sporisorium reilianum | 35.46 | 9e-86 | 292 |
LLPS-Mup-0801 | Mustela putorius furo | 35.46 | 5e-97 | 325 |
LLPS-Man-1835 | Macaca nemestrina | 35.45 | 7e-97 | 321 |
LLPS-Phn-0817 | Phaeosphaeria nodorum | 35.43 | 4e-87 | 295 |
LLPS-Cas-2010 | Carlito syrichta | 35.32 | 9e-96 | 320 |
LLPS-Paa-1989 | Papio anubis | 35.32 | 3e-96 | 322 |
LLPS-Mal-0443 | Mandrillus leucophaeus | 35.32 | 2e-96 | 322 |
LLPS-Tag-1173 | Taeniopygia guttata | 35.27 | 8e-102 | 337 |
LLPS-Anp-1732 | Anas platyrhynchos | 35.26 | 8e-100 | 332 |
LLPS-Meg-1719 | Meleagris gallopavo | 35.26 | 1e-98 | 328 |
LLPS-Ran-1166 | Rattus norvegicus | 35.26 | 1e-97 | 326 |
LLPS-Ova-3655 | Ovis aries | 35.19 | 6e-96 | 321 |
LLPS-Cea-0360 | Cercocebus atys | 35.12 | 6e-95 | 318 |
LLPS-Gaa-0610 | Gasterosteus aculeatus | 35.08 | 6e-93 | 313 |
LLPS-Ict-0293 | Ictidomys tridecemlineatus | 35.06 | 3e-96 | 322 |
LLPS-Pytr-0158 | Pyrenophora triticirepentis | 35.02 | 6e-88 | 298 |
LLPS-Mum-0028 | Mus musculus | 34.99 | 2e-97 | 325 |
LLPS-Pof-2533 | Poecilia formosa | 34.89 | 1e-94 | 317 |
LLPS-Ten-0109 | Tetraodon nigroviridis | 34.89 | 9e-95 | 317 |
LLPS-Urm-0081 | Ursus maritimus | 34.86 | 8e-96 | 321 |
LLPS-Aim-0424 | Ailuropoda melanoleuca | 34.86 | 2e-95 | 320 |
LLPS-Otg-1261 | Otolemur garnettii | 34.85 | 2e-96 | 322 |
LLPS-Dos-0554 | Dothistroma septosporum | 34.81 | 6e-83 | 278 |
LLPS-Orc-0059 | Oryctolagus cuniculus | 34.72 | 3e-96 | 322 |
LLPS-Crn-0318 | Cryptococcus neoformans | 34.69 | 2e-80 | 278 |
LLPS-Gaga-2389 | Gallus gallus | 34.67 | 9e-99 | 329 |
LLPS-Fec-0663 | Felis catus | 34.66 | 8e-95 | 318 |
LLPS-Eqc-2386 | Equus caballus | 34.66 | 3e-96 | 323 |
LLPS-Miv-0946 | Microbotryum violaceum | 34.65 | 3e-94 | 316 |
LLPS-Yal-0000 | Yarrowia lipolytica | 34.63 | 3e-78 | 270 |
LLPS-Pyt-0240 | Pyrenophora teres | 34.6 | 4e-87 | 295 |
LLPS-Zyt-0857 | Zymoseptoria tritici | 34.42 | 2e-81 | 278 |
LLPS-Xim-0686 | Xiphophorus maculatus | 34.31 | 7e-94 | 315 |
LLPS-Drm-0466 | Drosophila melanogaster | 34.29 | 6e-87 | 295 |
LLPS-Caj-0131 | Callithrix jacchus | 34.24 | 1e-97 | 325 |
LLPS-Pap-1630 | Pan paniscus | 34.06 | 4e-97 | 324 |
LLPS-Pat-2673 | Pan troglodytes | 34.06 | 9e-97 | 323 |
LLPS-Hos-2033 | Homo sapiens | 34.06 | 6e-97 | 324 |
LLPS-Rhb-0099 | Rhinopithecus bieti | 34.06 | 1e-96 | 323 |
LLPS-Poa-2091 | Pongo abelii | 34.06 | 3e-97 | 325 |
LLPS-Nol-0594 | Nomascus leucogenys | 33.88 | 2e-95 | 320 |
LLPS-Chs-0921 | Chlorocebus sabaeus | 33.88 | 5e-96 | 321 |
LLPS-Gog-1096 | Gorilla gorilla | 33.88 | 2e-96 | 322 |
LLPS-Mea-0279 | Mesocricetus auratus | 33.82 | 7e-99 | 329 |
LLPS-Myl-0957 | Myotis lucifugus | 33.76 | 6e-96 | 321 |
LLPS-Bot-1192 | Bos taurus | 33.64 | 1e-97 | 325 |
LLPS-Cap-1325 | Cavia porcellus | 33.57 | 3e-73 | 258 |
LLPS-Aon-2708 | Aotus nancymaae | 33.52 | 3e-96 | 322 |
LLPS-Gas-0298 | Galdieria sulphuraria | 33.41 | 2e-67 | 241 |
LLPS-Sac-1056 | Saccharomyces cerevisiae | 33.39 | 3e-84 | 288 |
LLPS-Sus-0270 | Sus scrofa | 33.33 | 2e-95 | 320 |
LLPS-Asg-0433 | Ashbya gossypii | 33.07 | 5e-81 | 279 |
LLPS-Chc-0898 | Chondrus crispus | 32.04 | 1e-76 | 269 |
LLPS-Kop-0023 | Komagataella pastoris | 31.76 | 2e-63 | 230 |
LLPS-Mel-0653 | Melampsora laricipopulina | 30.92 | 4e-64 | 232 |
LLPS-Put-0122 | Puccinia triticina | 30.63 | 8e-21 | 99.8 |
LLPS-Pug-0313 | Puccinia graminis | 30.4 | 8e-65 | 234 |
LLPS-Cym-0302 | Cyanidioschyzon merolae | 29.54 | 4e-51 | 194 |
LLPS-Cae-0409 | Caenorhabditis elegans | 29.22 | 6e-57 | 209 |