LLPS-Art-0066
PERK1
▼ OVERVIEW
| Status: | Reviewed |
| Protein Name: | Proline-rich receptor-like protein kinase PERK1; Proline-rich extensin-like receptor kinase 1; AtPERK1 |
| Gene Name: | PERK1, At3g24550, MOB24.13 |
| Ensembl Gene: | AT3G24550 |
| Ensembl Protein: | AT3G24550.1 |
| Organism: | Arabidopsis thaliana |
| Taxa ID: | 3702 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Description | Tissue/Cell | PMIDs |
|---|---|---|---|
| Nucleolus | "...We identified 1602 proteins in the nucleolar and 2544 proteins in the nuclear fraction with an overlap of 1429 proteins." | Arabidopsis thaliana cells | 26980300 |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | AT3G24550.1 | AT3G24550.1 |
| UniProt | Q9LV48, PERK1_ARATH, C0Z3E1, Q6QJ27, Q6QJ28, Q94JZ6 | |
| GeneBank | BT008409, AY093065, AB020746, AK319105, AY536855, AF370509, BT008400, AY059901, CP002686, AY128792, AY056788, AY536856 | AAL10479.1, AAM91192.1, AAS65794.1, AEE76920.1, AAK43886.1, BAH57220.1, AAL24383.1, AAP37759.1, AAP37768.1, BAB02007.1, AAM13064.1, AAS65793.1 |
| RefSeq | NM_113366.3 | NP_189098.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MSTAPSPGTT PSPSPPSPPT NSTTTTPPPA ASSPPPTTTP SSPPPSPSTN STSPPPSSPL 60 61 PPSLPPPSPP GSLTPPLPQP SPSAPITPSP PSPTTPSNPR SPPSPNQGPP NTPSGSTPRT 120 121 PSNTKPSPPS DSSDGLSTGV VVGIAIGGVA ILVILTLICL LCKKKRRRRH DDEAAYYVPP 180 181 PPPSGPKAGG PYGGQQQYWQ QQNASRPSDN HVVTSLPPPK PPSPPRKPPP PPPPPAFMSS 240 241 SGGSDYSDLP VLPPPSPGLV LGFSKSTFTY EELSRATNGF SEANLLGQGG FGYVHKGILP 300 301 SGKEVAVKQL KAGSGQGERE FQAEVEIISR VHHRHLVSLI GYCMAGVQRL LVYEFVPNNN 360 361 LEFHLHGKGR PTMEWSTRLK IALGSAKGLS YLHEDCNPKI IHRDIKASNI LIDFKFEAKV 420 421 ADFGLAKIAS DTNTHVSTRV MGTFGYLAPE YAASGKLTEK SDVFSFGVVL LELITGRRPV 480 481 DANNVYVDDS LVDWARPLLN RASEEGDFEG LADSKMGNEY DREEMARMVA CAAACVRHSA 540 541 RRRPRMSQIV RALEGNVSLS DLNEGMRPGH SNVYSSYGGS TDYDTSQYND DMIKFRKMAL 600 601 GTQEYGTTGE YSNPTSDYGL YPSGSSSEGQ ATREMEMGKI KKTGQGYSGP SL 652 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGTCCACAG CGCCGTCTCC AGGCACTACT CCATCACCAT CTCCACCGTC TCCTCCCACA 60 61 AACTCGACAA CCACCACTCC TCCTCCAGCA GCCTCTTCTC CTCCTCCCAC CACAACTCCT 120 121 TCTTCTCCTC CTCCGTCGCC GTCAACTAAT TCAACCTCTC CTCCTCCTTC TTCTCCTTTA 180 181 CCTCCTTCTC TTCCTCCTCC ATCTCCTCCT GGATCTTTAA CTCCTCCTCT TCCTCAACCT 240 241 TCCCCCTCCG CTCCCATCAC TCCTTCTCCA CCGTCTCCCA CCACACCCTC AAACCCTCGA 300 301 AGCCCTCCAT CTCCTAACCA AGGACCACCA AACACTCCCT CAGGATCTAC TCCTAGAACT 360 361 CCATCAAACA CTAAACCGTC GCCGCCGTCT GATTCTTCCG ATGGATTGTC TACCGGAGTT 420 421 GTGGTAGGAA TCGCCATTGG AGGAGTCGCT ATTCTTGTTA TACTGACTCT GATTTGTCTT 480 481 CTCTGTAAGA AGAAACGAAG AAGAAGACAC GACGATGAAG CTGCTTACTA TGTTCCTCCT 540 541 CCTCCTCCAT CTGGTCCCAA AGCTGGAGGA CCTTACGGTG GTCAACAACA GTATTGGCAA 600 601 CAACAAAACG CGTCACGGCC GTCAGATAAT CATGTAGTGA CGTCATTGCC ACCACCTAAG 660 661 CCTCCATCTC CACCACGAAA ACCTCCTCCG CCACCTCCAC CACCAGCATT CATGAGTAGC 720 721 AGTGGTGGTT CTGACTATTC GGATCTTCCG GTTCTTCCTC CACCATCTCC AGGGCTTGTG 780 781 TTAGGCTTTT CTAAAAGCAC TTTCACTTAT GAGGAGTTGT CGAGAGCTAC TAATGGCTTC 840 841 TCTGAGGCTA ATTTGTTAGG ACAAGGAGGG TTTGGTTATG TGCATAAAGG TATATTGCCT 900 901 AGTGGGAAAG AAGTTGCTGT GAAACAGTTG AAAGCTGGTA GTGGTCAGGG AGAGAGAGAG 960 961 TTTCAGGCTG AGGTTGAGAT CATTAGCAGA GTTCATCACA GGCATTTGGT TTCTCTTATT 1020 1021 GGTTATTGTA TGGCCGGTGT TCAAAGATTA CTTGTCTATG AGTTTGTTCC AAACAACAAT 1080 1081 CTTGAGTTTC ACCTCCATGG TAAGGGACGG CCTACGATGG AATGGAGTAC TAGATTGAAG 1140 1141 ATTGCTCTTG GATCTGCTAA AGGACTTTCA TATCTTCATG AAGATTGCAA TCCGAAAATC 1200 1201 ATTCACCGTG ATATTAAGGC GTCAAACATA TTGATTGATT TCAAATTTGA AGCTAAGGTT 1260 1261 GCTGACTTTG GTCTTGCCAA GATTGCTTCT GATACAAACA CTCATGTATC TACACGCGTG 1320 1321 ATGGGAACCT TTGGGTATTT GGCTCCGGAA TATGCTGCAA GTGGAAAGCT CACAGAAAAG 1380 1381 TCTGACGTTT TCTCATTTGG CGTTGTACTT TTGGAACTTA TTACTGGGAG GCGCCCTGTT 1440 1441 GATGCGAACA ATGTCTATGT AGATGACAGC TTAGTTGACT GGGCACGACC ATTGCTTAAC 1500 1501 CGAGCATCTG AGGAAGGAGA TTTTGAGGGT TTGGCTGATT CAAAGATGGG TAATGAGTAT 1560 1561 GACAGAGAGG AGATGGCTCG CATGGTTGCT TGCGCTGCGG CTTGTGTTCG CCATTCAGCT 1620 1621 CGCCGCAGAC CTCGCATGAG CCAGATAGTA CGGGCGTTAG AAGGAAATGT ATCGCTGTCT 1680 1681 GATCTTAACG AAGGGATGAG ACCGGGTCAC AGCAACGTAT ACAGCTCATA TGGAGGAAGC 1740 1741 ACAGACTATG ACACGAGCCA ATACAACGAC GACATGATAA AGTTTAGGAA AATGGCTCTT 1800 1801 GGAACTCAAG AATACGGCAC AACCGGCGAG TACAGTAATC CAACCAGTGA CTACGGACTG 1860 1861 TACCCGTCTG GTTCAAGCAG TGAAGGTCAA GCCACACGAG AAATGGAGAT GGGAAAGATT 1920 1921 AAGAAAACCG GTCAAGGTTA TAGTGGACCC TCTCTTTAA 1959 |
▼ ANNOTATION
| Disorder | ||||
| IUPred2A | ||||
| Physicochemical | ||||
| Compute pI/Mw | AAindex | |||
| Function | ||||
| iEKPD | ||||
| Localization | ||||
| COMPARTMENTS | ||||
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Arl-0002 | Arabidopsis lyrata | 99.11 | 0.0 | 786 |
| LLPS-Brr-1642 | Brassica rapa | 92.67 | 0.0 | 746 |
| LLPS-Bro-2755 | Brassica oleracea | 92.67 | 0.0 | 745 |
| LLPS-Brn-3339 | Brassica napus | 92.46 | 0.0 | 740 |
| LLPS-Pot-2379 | Populus trichocarpa | 82.01 | 0.0 | 649 |
| LLPS-Viv-1457 | Vitis vinifera | 81.19 | 0.0 | 617 |
| LLPS-Prp-2403 | Prunus persica | 80.92 | 0.0 | 624 |
| LLPS-Gor-2688 | Gossypium raimondii | 80.88 | 0.0 | 610 |
| LLPS-Nia-2463 | Nicotiana attenuata | 79.12 | 0.0 | 610 |
| LLPS-Glm-1347 | Glycine max | 79.08 | 0.0 | 625 |
| LLPS-Cus-2093 | Cucumis sativus | 78.92 | 0.0 | 603 |
| LLPS-Sol-1506 | Solanum lycopersicum | 78.87 | 0.0 | 606 |
| LLPS-Phv-1049 | Phaseolus vulgaris | 78.57 | 0.0 | 624 |
| LLPS-Amt-2254 | Amborella trichopoda | 78.52 | 0.0 | 605 |
| LLPS-Vir-1308 | Vigna radiata | 78.46 | 0.0 | 618 |
| LLPS-Met-1218 | Medicago truncatula | 78.34 | 0.0 | 620 |
| LLPS-Via-1325 | Vigna angularis | 78.32 | 0.0 | 620 |
| LLPS-Dac-1104 | Daucus carota | 78.15 | 0.0 | 624 |
| LLPS-Mua-1869 | Musa acuminata | 77.4 | 0.0 | 605 |
| LLPS-Sei-0082 | Setaria italica | 76.98 | 0.0 | 589 |
| LLPS-Orp-2286 | Oryza punctata | 76.84 | 0.0 | 578 |
| LLPS-Ors-0290 | Oryza sativa | 76.84 | 0.0 | 577 |
| LLPS-Orr-2399 | Oryza rufipogon | 76.84 | 0.0 | 577 |
| LLPS-Orni-2357 | Oryza nivara | 76.84 | 0.0 | 577 |
| LLPS-Orb-0213 | Oryza barthii | 76.84 | 0.0 | 575 |
| LLPS-Ori-1203 | Oryza indica | 76.84 | 0.0 | 575 |
| LLPS-Orgl-2008 | Oryza glumaepatula | 76.84 | 0.0 | 577 |
| LLPS-Orm-1907 | Oryza meridionalis | 76.58 | 0.0 | 577 |
| LLPS-Sob-1533 | Sorghum bicolor | 76.52 | 0.0 | 571 |
| LLPS-Lep-2159 | Leersia perrieri | 76.32 | 0.0 | 575 |
| LLPS-Brd-1403 | Brachypodium distachyon | 75.89 | 0.0 | 586 |
| LLPS-Hea-2111 | Helianthus annuus | 75.84 | 0.0 | 591 |
| LLPS-Tru-2076 | Triticum urartu | 75.32 | 0.0 | 580 |
| LLPS-Tra-2962 | Triticum aestivum | 75.32 | 0.0 | 580 |
| LLPS-Orbr-1720 | Oryza brachyantha | 74.68 | 0.0 | 578 |
| LLPS-Zem-0743 | Zea mays | 73.3 | 0.0 | 564 |
| LLPS-Mae-2363 | Manihot esculenta | 69.67 | 1e-172 | 513 |
| LLPS-Hov-1890 | Hordeum vulgare | 69.17 | 1e-178 | 529 |
| LLPS-Sem-2213 | Selaginella moellendorffii | 68.25 | 1e-168 | 495 |
| LLPS-Php-0375 | Physcomitrella patens | 64.56 | 6e-137 | 428 |
| LLPS-Sot-1080 | Solanum tuberosum | 39.29 | 1e-30 | 130 |
| LLPS-Coc-0056 | Corchorus capsularis | 38.56 | 4e-38 | 156 |
| LLPS-Org-0024 | Oryza glaberrima | 37.88 | 1e-26 | 120 |
| LLPS-Thc-0086 | Theobroma cacao | 37.88 | 5e-30 | 129 |
| LLPS-Pof-0363 | Poecilia formosa | 37.76 | 5e-28 | 122 |
| LLPS-Xim-4114 | Xiphophorus maculatus | 37.37 | 3e-28 | 123 |
| LLPS-Gas-1313 | Galdieria sulphuraria | 36.36 | 1e-31 | 136 |
| LLPS-Orl-2155 | Oryzias latipes | 35.71 | 9e-27 | 118 |
| LLPS-Scm-1738 | Scophthalmus maximus | 34.13 | 7e-27 | 119 |
| LLPS-Leo-2199 | Lepisosteus oculatus | 33.82 | 4e-28 | 122 |
| LLPS-Icp-1376 | Ictalurus punctatus | 33.04 | 4e-26 | 116 |
| LLPS-Asm-3432 | Astyanax mexicanus | 32.37 | 3e-27 | 119 |
| LLPS-Dar-2768 | Danio rerio | 32.2 | 1e-25 | 115 |
| LLPS-Tar-0532 | Takifugu rubripes | 32.14 | 2e-26 | 117 |