LLPS-Arl-2889
ARALYDRAFT_318019
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Basic endochitinase |
| Gene Name: | ARALYDRAFT_318019 |
| Ensembl Gene: | fgenesh1_pm.C_scaffold_3001035 |
| Ensembl Protein: | fgenesh1_pm.C_scaffold_3001035 |
| Organism: | Arabidopsis lyrata |
| Taxa ID: | 81972 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | fgenesh1_pm.C_scaffold_3001035 | fgenesh1_pm.C_scaffold_3001035 |
| UniProt | D7KZS9, D7KZS9_ARALL | |
| GeneBank | GL348715 | EFH61166.1 |
| RefSeq | XM_002884861.1 | XP_002884907.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MPSKKEYHKT LNKMKTNLFL FLIISLLLSF SSAEQCGRQA GGALCPNGLC CSEFGWCGDT 60 61 EPYCKQPGCQ SQCTPGGTPG PTGDLSGIIS SSQFDDMLKH RNDAACPARG FYTYNAFITA 120 121 AKSFPGFGTT GDTATRKKEV AAFFGQTSHE TTGGWASAPD GPFSWGYCFK QEQNPGSDYC 180 181 EPSATWPCAS GKRYYGRGPM QLSWNYNYGL CGRAIGVDLL NNPDLVANDA VIAFKAAIWF 240 241 WMTAQPPKPS CHAVIAGQWQ PSDADRAAGR LPGYGVITNI INGGLECGRG QDGRVADRIG 300 301 FYQRYCTIFG VNPGGNLDCY NQRPFGNGLL NAAI 334 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGCCTTCAA AAAAAGAATA CCATAAAACA TTGAACAAAA TGAAGACTAA TCTTTTTCTC 60 61 TTTCTCATCA TCTCACTTCT CTTATCATTT TCCTCAGCCG AGCAATGTGG TCGCCAAGCT 120 121 GGAGGAGCAC TCTGCCCCAA CGGTCTATGC TGCAGCGAGT TCGGATGGTG CGGTGACACC 180 181 GAACCCTACT GTAAGCAGCC TGGCTGCCAA AGCCAGTGCA CTCCCGGCGG TACTCCTGGA 240 241 CCCACCGGCG ATCTTTCGGG CATCATTTCA AGTTCTCAGT TCGATGATAT GCTTAAGCAT 300 301 AGGAATGATG CTGCTTGTCC TGCTAGAGGT TTCTACACTT ACAACGCCTT CATCACCGCT 360 361 GCAAAGTCCT TCCCCGGTTT TGGCACCACC GGAGACACCG CCACGAGAAA GAAGGAGGTC 420 421 GCCGCCTTCT TCGGCCAGAC TTCCCATGAA ACCACAGGTG GGTGGGCTTC AGCACCAGAC 480 481 GGACCATTTT CATGGGGCTA CTGTTTCAAG CAAGAACAGA ATCCTGGTTC AGACTACTGT 540 541 GAACCAAGCG CCACGTGGCC ATGCGCATCT GGCAAACGGT ACTACGGAAG AGGACCGATG 600 601 CAGCTGTCGT GGAACTACAA TTACGGTCTA TGTGGTAGAG CCATAGGAGT TGACTTACTC 660 661 AACAACCCCG ACCTCGTAGC CAACGACGCA GTGATCGCTT TCAAAGCCGC GATTTGGTTC 720 721 TGGATGACTG CTCAGCCTCC GAAACCATCG TGCCACGCGG TGATAGCCGG CCAATGGCAG 780 781 CCGTCAGACG CCGACCGTGC AGCCGGGAGA TTACCCGGTT ATGGAGTGAT TACGAACATC 840 841 ATTAACGGTG GATTGGAATG TGGACGTGGC CAAGACGGGA GAGTCGCGGA TCGTATAGGG 900 901 TTTTATCAGA GGTATTGTAC CATATTTGGG GTTAATCCTG GTGGTAATCT TGATTGTTAC 960 961 AACCAAAGAC CCTTTGGTAA CGGCCTCCTC AACGCCGCTA TCTAA 1005 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Art-1174 | Arabidopsis thaliana | 94.33 | 0.0 | 604 |
| LLPS-Brn-1936 | Brassica napus | 86.51 | 0.0 | 537 |
| LLPS-Brr-1922 | Brassica rapa | 86.23 | 0.0 | 533 |
| LLPS-Bro-2954 | Brassica oleracea | 84.34 | 0.0 | 541 |
| LLPS-Nia-1779 | Nicotiana attenuata | 74.41 | 4e-161 | 461 |
| LLPS-Mae-0627 | Manihot esculenta | 73.58 | 2e-160 | 459 |
| LLPS-Sei-1666 | Setaria italica | 73.24 | 4e-140 | 405 |
| LLPS-Pot-0819 | Populus trichocarpa | 72.91 | 1e-159 | 456 |
| LLPS-Via-1246 | Vigna angularis | 72.15 | 1e-156 | 449 |
| LLPS-Vir-0070 | Vigna radiata | 72.15 | 4e-156 | 447 |
| LLPS-Mua-0800 | Musa acuminata | 72.05 | 1e-153 | 441 |
| LLPS-Met-1208 | Medicago truncatula | 71.43 | 9e-156 | 449 |
| LLPS-Sot-2107 | Solanum tuberosum | 71.24 | 3e-153 | 440 |
| LLPS-Coc-1145 | Corchorus capsularis | 70.55 | 3e-142 | 422 |
| LLPS-Tra-1248 | Triticum aestivum | 70.33 | 3e-148 | 427 |
| LLPS-Gor-1313 | Gossypium raimondii | 70.23 | 9e-152 | 437 |
| LLPS-Sol-0403 | Solanum lycopersicum | 70.23 | 5e-152 | 437 |
| LLPS-Phv-0595 | Phaseolus vulgaris | 70.03 | 2e-151 | 436 |
| LLPS-Prp-1468 | Prunus persica | 69.36 | 4e-147 | 425 |
| LLPS-Hov-0213 | Hordeum vulgare | 69.1 | 6e-145 | 419 |
| LLPS-Thc-0714 | Theobroma cacao | 68.67 | 2e-145 | 421 |
| LLPS-Viv-2462 | Vitis vinifera | 68.21 | 9e-141 | 409 |
| LLPS-Glm-0235 | Glycine max | 68.0 | 5e-143 | 414 |
| LLPS-Orp-2384 | Oryza punctata | 67.89 | 4e-144 | 417 |
| LLPS-Orm-0136 | Oryza meridionalis | 67.69 | 1e-143 | 416 |
| LLPS-Brd-0247 | Brachypodium distachyon | 67.67 | 2e-141 | 410 |
| LLPS-Amt-1217 | Amborella trichopoda | 67.53 | 1e-142 | 414 |
| LLPS-Sob-0095 | Sorghum bicolor | 66.99 | 1e-139 | 406 |
| LLPS-Org-1240 | Oryza glaberrima | 66.45 | 3e-141 | 410 |
| LLPS-Orgl-2025 | Oryza glumaepatula | 66.45 | 9e-143 | 414 |
| LLPS-Dac-1295 | Daucus carota | 66.34 | 6e-138 | 401 |
| LLPS-Orni-1145 | Oryza nivara | 66.12 | 3e-141 | 410 |
| LLPS-Orb-1885 | Oryza barthii | 66.11 | 1e-140 | 408 |
| LLPS-Cus-1458 | Cucumis sativus | 66.03 | 1e-140 | 408 |
| LLPS-Orr-1304 | Oryza rufipogon | 66.01 | 1e-144 | 420 |
| LLPS-Ori-2136 | Oryza indica | 66.0 | 4e-140 | 407 |
| LLPS-Zem-1558 | Zea mays | 65.89 | 1e-134 | 392 |
| LLPS-Ors-2128 | Oryza sativa | 65.8 | 2e-140 | 408 |
| LLPS-Lep-1683 | Leersia perrieri | 65.42 | 4e-138 | 402 |
| LLPS-Tru-0779 | Triticum urartu | 64.98 | 3e-129 | 380 |
| LLPS-Hea-0405 | Helianthus annuus | 62.84 | 7e-130 | 380 |
| LLPS-Sem-2143 | Selaginella moellendorffii | 61.26 | 2e-130 | 382 |
| LLPS-Php-0970 | Physcomitrella patens | 37.54 | 4e-57 | 194 |