LLPS-Arl-2670
ARALYDRAFT_478847
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Pectinesterase |
| Gene Name: | ARALYDRAFT_478847 |
| Ensembl Gene: | fgenesh2_kg.3__1548__AT3G14310.1 |
| Ensembl Protein: | fgenesh2_kg.3__1548__AT3G14310.1 |
| Organism: | Arabidopsis lyrata |
| Taxa ID: | 81972 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ FUNCTION
| Acts in the modification of cell walls via demethylesterification of cell wall pectin. |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | fgenesh2_kg.3__1548__AT3G14310.1 | fgenesh2_kg.3__1548__AT3G14310.1 |
| UniProt | D7L333, D7L333_ARALL | |
| GeneBank | GL348715 | EFH61292.1 |
| RefSeq | XM_002884987.1 | XP_002885033.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MAPSMKEIFS NNFKKNKKLV LLSSAVALLL VAAVAGFSAG ASKSNEKRTL SPSSHAVLRS 60 61 SCSSTRYPEL CISAVANTGG VEITSQKDVI EASLNLTIIA VEHNYFNVKK LIKKRKGLTP 120 121 REKTALHDCL ETIDETLDEL HETVEDLHLY PARKTLREHA GDLKTLISSA ITNQETCLDG 180 181 FSHDDADKQV RKALLKGQIH VEHMCSNALA MIKNMTDTDI ANFEQKAKIT SNNRKLKEEN 240 241 QETTVADIAG AGELDAEGWP TWLSAGDRRL LQGSSVKADA TVAADGSGTF KTVAAAVAAA 300 301 PENSNKRYVI HIKAGVYREN VEVAKKKKNI MFMGDGRTRT IITGSRNVVD GSTTFHSATV 360 361 AAVGERFLAR DITFQNTAGP SKHQAVALRV GSDFSAFYNC DMLAYQDTLY VHSNRQFFIK 420 421 CIIAGTVDFI FGNAAVVLQD CDIHARRPNS GQKNMVTAQG RTDPNQNTGI VIQKCRIGAT 480 481 SDLQSVKGSF PTYLGRPWKE YSQTVIMQSA ISDVIRPEGW SEWTGTFALN TLTYREYANT 540 541 GAGAGTANRV KWGGFKVITA AAEAQKYTAG QFIGGGGWLS STGFPFSLGL 590 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCACCAT CAATGAAAGA AATCTTTTCC AATAATTTCA AGAAAAACAA GAAACTTGTT 60 61 TTGCTATCCT CCGCCGTAGC TTTGCTCCTC GTAGCCGCCG TCGCCGGATT CTCCGCCGGA 120 121 GCTTCAAAAT CCAACGAAAA ACGAACTCTA TCCCCGTCGT CTCACGCCGT GCTAAGATCC 180 181 TCCTGCAGCT CCACGCGTTA CCCTGAGCTC TGTATCTCCG CCGTGGCAAA TACCGGCGGC 240 241 GTCGAGATAA CGTCGCAAAA AGACGTCATC GAGGCATCGC TGAACCTAAC AATAATCGCC 300 301 GTGGAGCACA ATTACTTCAA CGTGAAGAAG CTGATCAAGA AGAGGAAAGG ACTAACGCCG 360 361 CGGGAGAAGA CGGCGCTTCA TGACTGTTTG GAGACTATTG ATGAGACGCT GGACGAGCTC 420 421 CATGAAACGG TGGAAGATCT ACATTTGTAT CCAGCCAGAA AAACTCTCCG GGAACACGCC 480 481 GGAGATCTCA AAACCCTAAT TAGCTCCGCC ATTACCAACC AGGAGACTTG TCTCGACGGC 540 541 TTCTCTCATG ATGACGCCGA TAAGCAAGTT CGTAAAGCCT TGTTGAAGGG TCAGATACAC 600 601 GTAGAGCACA TGTGCAGCAA CGCTCTAGCA ATGATCAAGA ACATGACTGA TACTGACATA 660 661 GCCAACTTCG AGCAAAAAGC TAAAATAACC TCAAACAACC GTAAGCTCAA GGAGGAGAAT 720 721 CAGGAAACTA CGGTGGCAGA TATCGCCGGA GCCGGAGAAC TAGACGCGGA GGGATGGCCA 780 781 ACTTGGTTAT CCGCTGGAGA TAGGAGGCTT CTTCAGGGTT CGAGTGTGAA AGCCGACGCC 840 841 ACCGTGGCAG CTGACGGTAG CGGTACATTT AAGACGGTGG CTGCTGCTGT TGCGGCGGCC 900 901 CCGGAAAATA GTAACAAGAG GTATGTGATA CATATTAAAG CCGGGGTTTA TAGAGAGAAT 960 961 GTGGAGGTTG CAAAGAAGAA AAAGAATATA ATGTTTATGG GAGATGGTCG GACGAGAACT 1020 1021 ATTATCACCG GAAGTCGAAA CGTCGTCGAC GGTAGCACCA CTTTCCACTC CGCCACCGTT 1080 1081 GCTGCTGTCG GCGAGAGATT CTTAGCTCGT GACATCACTT TCCAAAACAC GGCGGGTCCG 1140 1141 TCGAAGCACC AAGCAGTGGC TCTCCGTGTG GGTTCTGATT TCTCCGCCTT CTACAATTGC 1200 1201 GACATGTTGG CTTATCAAGA CACTCTTTAC GTCCACTCTA ACCGTCAATT CTTCATCAAG 1260 1261 TGTATCATCG CCGGAACCGT CGACTTCATC TTCGGGAACG CCGCCGTCGT GCTCCAAGAC 1320 1321 TGTGACATTC ACGCTCGCCG CCCCAACTCC GGCCAGAAAA ACATGGTCAC AGCTCAGGGA 1380 1381 CGAACCGATC CGAACCAGAA CACAGGGATC GTTATCCAGA AATGTAGGAT CGGTGCCACG 1440 1441 TCGGATTTAC AGTCGGTGAA AGGTAGTTTC CCTACGTACC TTGGTCGGCC GTGGAAAGAG 1500 1501 TATTCACAAA CGGTGATAAT GCAGTCGGCT ATCTCCGACG TGATCCGTCC CGAAGGGTGG 1560 1561 TCTGAGTGGA CCGGGACTTT TGCGTTGAAC ACTCTGACTT ATAGAGAGTA TGCGAATACA 1620 1621 GGAGCAGGGG CTGGAACTGC AAATAGAGTG AAGTGGGGGG GCTTTAAGGT AATTACGGCT 1680 1681 GCTGCTGAAG CTCAAAAATA TACGGCTGGT CAGTTTATTG GTGGTGGAGG CTGGTTATCG 1740 1741 TCGACCGGTT TCCCCTTCTC GCTCGGTCTT TGA 1773 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Apoplast | |
Cellular Component | Cell wall | |
Cellular Component | Cytoplasm | |
Cellular Component | Plasma membrane | |
Molecular Function | Aspartyl esterase activity | |
Molecular Function | Enzyme inhibitor activity | |
Molecular Function | Pectinesterase activity | |
Biological Process | Cell wall modification | |
Biological Process | Defense response to Gram-negative bacterium | |
Biological Process | Pectin catabolic process | |
Biological Process | Response to fungus | |
Biological Process | Response to nematode |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Art-1465 | Arabidopsis thaliana | 96.9 | 0.0 | 1072 |
| LLPS-Brn-2740 | Brassica napus | 92.14 | 0.0 | 1015 |
| LLPS-Brr-0653 | Brassica rapa | 91.77 | 0.0 | 1011 |
| LLPS-Bro-2102 | Brassica oleracea | 91.21 | 0.0 | 1009 |
| LLPS-Thc-1465 | Theobroma cacao | 75.23 | 0.0 | 801 |
| LLPS-Via-0440 | Vigna angularis | 75.14 | 0.0 | 806 |
| LLPS-Nia-0610 | Nicotiana attenuata | 75.05 | 0.0 | 824 |
| LLPS-Sot-0365 | Solanum tuberosum | 74.77 | 0.0 | 810 |
| LLPS-Dac-0622 | Daucus carota | 74.63 | 0.0 | 796 |
| LLPS-Sol-1250 | Solanum lycopersicum | 74.48 | 0.0 | 789 |
| LLPS-Mae-1371 | Manihot esculenta | 74.21 | 0.0 | 801 |
| LLPS-Met-2254 | Medicago truncatula | 74.21 | 0.0 | 801 |
| LLPS-Viv-1795 | Vitis vinifera | 73.79 | 0.0 | 793 |
| LLPS-Prp-0830 | Prunus persica | 73.77 | 0.0 | 776 |
| LLPS-Gor-0386 | Gossypium raimondii | 73.57 | 0.0 | 811 |
| LLPS-Phv-0180 | Phaseolus vulgaris | 73.3 | 0.0 | 764 |
| LLPS-Pot-2581 | Populus trichocarpa | 72.86 | 0.0 | 796 |
| LLPS-Glm-0922 | Glycine max | 72.0 | 0.0 | 786 |
| LLPS-Cus-2396 | Cucumis sativus | 71.77 | 0.0 | 781 |
| LLPS-Amt-1563 | Amborella trichopoda | 69.69 | 0.0 | 723 |
| LLPS-Hea-1635 | Helianthus annuus | 69.0 | 0.0 | 734 |
| LLPS-Coc-1614 | Corchorus capsularis | 67.5 | 7e-139 | 415 |
| LLPS-Orb-2158 | Oryza barthii | 55.22 | 5e-116 | 361 |
| LLPS-Hov-0260 | Hordeum vulgare | 54.6 | 4e-117 | 360 |
| LLPS-Lep-1807 | Leersia perrieri | 53.22 | 0.0 | 536 |
| LLPS-Orp-2338 | Oryza punctata | 53.16 | 7e-180 | 528 |
| LLPS-Orr-1652 | Oryza rufipogon | 52.67 | 0.0 | 540 |
| LLPS-Orni-2083 | Oryza nivara | 52.67 | 0.0 | 540 |
| LLPS-Tra-1238 | Triticum aestivum | 52.58 | 1e-177 | 522 |
| LLPS-Ori-1429 | Oryza indica | 52.49 | 2e-178 | 524 |
| LLPS-Orm-1535 | Oryza meridionalis | 51.87 | 1e-179 | 528 |
| LLPS-Orgl-2269 | Oryza glumaepatula | 51.87 | 0.0 | 531 |
| LLPS-Brd-2037 | Brachypodium distachyon | 51.47 | 2e-177 | 521 |
| LLPS-Sob-1095 | Sorghum bicolor | 50.55 | 4e-170 | 503 |
| LLPS-Vir-1327 | Vigna radiata | 49.89 | 2e-134 | 411 |
| LLPS-Org-0996 | Oryza glaberrima | 49.16 | 5e-161 | 480 |
| LLPS-Ors-2178 | Oryza sativa | 49.16 | 5e-161 | 480 |
| LLPS-Orbr-0758 | Oryza brachyantha | 46.9 | 6e-108 | 340 |
| LLPS-Mua-1799 | Musa acuminata | 43.51 | 9e-112 | 351 |
| LLPS-Zem-1975 | Zea mays | 25.0 | 1e-10 | 65.9 |
| LLPS-Sei-2143 | Setaria italica | 24.0 | 4e-09 | 60.8 |