LLPS-Arl-2538
ARALYDRAFT_890765
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Phosphoribulokinase |
| Gene Name: | ARALYDRAFT_890765 |
| Ensembl Gene: | scaffold_103559.1 |
| Ensembl Protein: | scaffold_103559.1 |
| Organism: | Arabidopsis lyrata |
| Taxa ID: | 81972 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | scaffold_103559.1 | scaffold_103559.1 |
| UniProt | D7KHF4, D7KHF4_ARALL | |
| GeneBank | GL348713 | EFH67226.1 |
| RefSeq | XM_002890921.1 | XP_002890967.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MAVSTIYSTQ ALNSTHFLTS SSSSKQVFLY RRQPQTNRRF NTLITCAQET IVIGLAADSG 60 61 CGKSTFMRRL TSVFGGAAKP PKGGNPDSNT LISDTTTVIC LDDYHSLDRY GRKEQKVTAL 120 121 DPRANDFDLM YEQVKALKSG VAVEKPIYNH VTGLLDPPEL IQPPKILVIE GLHPMFDERV 180 181 RDLLDFSIYL DISNEVKFAW KIQRDMAERG HSLESIKASI EARKPDFDAF IDPQKQYADA 240 241 VIEVLPTTLI PDDNEGKVLR VRLIMKEGVK YFSPVYLFDE GSTISWIPCG RKLTCSYPGI 300 301 KFNYEPDSYF DHEVSVLEMD GQFDRLDELI YVESHLSNLS TKFYGEVTQQ MLKHADFPGS 360 361 NNGTGLFQTI VGLKIRDLYE QLIANKATAR AEAKA 395 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCTGTCT CAACTATCTA CTCAACACAA GCTCTTAATT CAACTCATTT CTTAACCTCT 60 61 TCTTCCTCTT CCAAACAAGT CTTCCTCTAC CGTCGTCAAC CACAAACCAA CCGGAGATTC 120 121 AACACACTCA TCACTTGCGC ACAAGAAACC ATCGTGATCG GACTAGCTGC CGACTCTGGC 180 181 TGCGGCAAAA GTACCTTTAT GCGGAGGCTC ACCAGCGTCT TTGGTGGCGC TGCTAAGCCT 240 241 CCAAAAGGCG GGAACCCTGA TTCCAACACA CTCATCAGCG ACACGACCAC TGTGATCTGT 300 301 CTTGACGATT ACCATTCCTT GGACAGGTAC GGTCGCAAAG AGCAAAAAGT CACCGCTTTG 360 361 GACCCACGAG CTAATGACTT TGATCTCATG TATGAGCAAG TCAAAGCTCT TAAGAGTGGT 420 421 GTTGCCGTTG AGAAACCGAT ATATAACCAT GTCACTGGAC TTCTTGACCC GCCTGAGCTT 480 481 ATTCAGCCTC CTAAGATTCT TGTCATCGAA GGTCTTCACC CAATGTTTGA TGAGAGAGTA 540 541 AGAGACTTAC TAGACTTCAG TATCTACTTA GACATTAGCA ACGAAGTCAA ATTCGCTTGG 600 601 AAAATTCAGA GGGACATGGC TGAAAGAGGT CACAGTTTGG AGAGCATCAA AGCGAGTATT 660 661 GAAGCCCGAA AGCCCGACTT CGATGCATTC ATCGACCCGC AAAAGCAGTA TGCGGATGCG 720 721 GTCATTGAAG TGCTTCCTAC GACGCTGATC CCAGACGACA ACGAAGGGAA AGTGTTGAGA 780 781 GTGAGACTAA TAATGAAGGA AGGAGTTAAG TACTTCAGCC CGGTTTATCT GTTTGATGAA 840 841 GGTTCAACAA TCTCGTGGAT CCCTTGCGGC CGCAAACTCA CTTGCTCGTA CCCTGGCATC 900 901 AAGTTCAACT ACGAACCTGA TTCATACTTC GACCATGAGG TATCGGTTTT GGAGATGGAT 960 961 GGACAGTTTG ATAGACTGGA CGAGCTGATT TACGTGGAGA GTCACTTGAG CAACCTCTCG 1020 1021 ACCAAATTCT ACGGCGAAGT CACTCAACAA ATGCTCAAAC ATGCTGACTT CCCGGGTAGC 1080 1081 AACAACGGGA CTGGTCTATT CCAAACCATT GTTGGATTGA AGATCAGAGA CCTCTATGAG 1140 1141 CAGCTCATTG CCAACAAAGC CACTGCTCGT GCAGAAGCTA AAGCCTAA 1188 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Art-0390 | Arabidopsis thaliana | 99.48 | 0.0 | 760 |
| LLPS-Brn-2289 | Brassica napus | 94.56 | 0.0 | 717 |
| LLPS-Brr-2608 | Brassica rapa | 94.3 | 0.0 | 716 |
| LLPS-Bro-3005 | Brassica oleracea | 94.07 | 0.0 | 714 |
| LLPS-Hov-1551 | Hordeum vulgare | 91.52 | 0.0 | 628 |
| LLPS-Zem-2222 | Zea mays | 90.62 | 0.0 | 629 |
| LLPS-Sob-1405 | Sorghum bicolor | 88.86 | 0.0 | 618 |
| LLPS-Php-2226 | Physcomitrella patens | 87.76 | 0.0 | 610 |
| LLPS-Sem-1769 | Selaginella moellendorffii | 86.21 | 0.0 | 609 |
| LLPS-Coc-0786 | Corchorus capsularis | 85.2 | 0.0 | 663 |
| LLPS-Mae-1782 | Manihot esculenta | 84.99 | 0.0 | 666 |
| LLPS-Gor-2793 | Gossypium raimondii | 84.13 | 0.0 | 661 |
| LLPS-Sot-0145 | Solanum tuberosum | 83.97 | 0.0 | 657 |
| LLPS-Nia-1998 | Nicotiana attenuata | 83.8 | 0.0 | 657 |
| LLPS-Hea-0347 | Helianthus annuus | 83.76 | 0.0 | 654 |
| LLPS-Dac-2019 | Daucus carota | 83.76 | 0.0 | 659 |
| LLPS-Pot-1099 | Populus trichocarpa | 83.67 | 0.0 | 661 |
| LLPS-Thc-0281 | Theobroma cacao | 83.38 | 0.0 | 657 |
| LLPS-Glm-1479 | Glycine max | 83.29 | 0.0 | 651 |
| LLPS-Tru-1323 | Triticum urartu | 82.7 | 0.0 | 636 |
| LLPS-Tra-2043 | Triticum aestivum | 82.7 | 0.0 | 636 |
| LLPS-Ors-0189 | Oryza sativa | 82.65 | 0.0 | 642 |
| LLPS-Orm-1112 | Oryza meridionalis | 82.65 | 0.0 | 642 |
| LLPS-Orr-2063 | Oryza rufipogon | 82.65 | 0.0 | 642 |
| LLPS-Org-1007 | Oryza glaberrima | 82.65 | 0.0 | 642 |
| LLPS-Ori-0010 | Oryza indica | 82.65 | 0.0 | 642 |
| LLPS-Orb-1181 | Oryza barthii | 82.65 | 0.0 | 642 |
| LLPS-Orgl-0908 | Oryza glumaepatula | 82.65 | 0.0 | 642 |
| LLPS-Phv-2481 | Phaseolus vulgaris | 82.62 | 0.0 | 647 |
| LLPS-Orp-1043 | Oryza punctata | 82.4 | 0.0 | 640 |
| LLPS-Mua-1159 | Musa acuminata | 82.35 | 0.0 | 637 |
| LLPS-Via-0182 | Vigna angularis | 82.12 | 0.0 | 649 |
| LLPS-Sei-2377 | Setaria italica | 82.05 | 0.0 | 631 |
| LLPS-Viv-1694 | Vitis vinifera | 82.03 | 0.0 | 652 |
| LLPS-Sol-2410 | Solanum lycopersicum | 81.98 | 0.0 | 639 |
| LLPS-Orbr-0813 | Oryza brachyantha | 81.89 | 0.0 | 637 |
| LLPS-Brd-0581 | Brachypodium distachyon | 81.68 | 0.0 | 635 |
| LLPS-Cus-2285 | Cucumis sativus | 81.68 | 0.0 | 650 |
| LLPS-Lep-1519 | Leersia perrieri | 81.63 | 0.0 | 640 |
| LLPS-Met-0396 | Medicago truncatula | 81.41 | 0.0 | 633 |
| LLPS-Prp-1845 | Prunus persica | 81.3 | 0.0 | 645 |
| LLPS-Amt-1486 | Amborella trichopoda | 81.2 | 0.0 | 639 |
| LLPS-Vir-1937 | Vigna radiata | 78.34 | 0.0 | 601 |
| LLPS-Orni-0213 | Oryza nivara | 78.24 | 0.0 | 587 |
| LLPS-Chr-1341 | Chlamydomonas reinhardtii | 74.57 | 0.0 | 533 |
| LLPS-Osl-1163 | Ostreococcus lucimarinus | 71.11 | 0.0 | 533 |
| LLPS-Gas-1079 | Galdieria sulphuraria | 66.57 | 2e-166 | 482 |
| LLPS-Cym-0431 | Cyanidioschyzon merolae | 62.09 | 5e-154 | 449 |
| LLPS-Chc-1232 | Chondrus crispus | 58.21 | 1e-148 | 433 |