LLPS-Arl-2451
ARALYDRAFT_492906
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Cyclin family protein |
| Gene Name: | ARALYDRAFT_492906 |
| Ensembl Gene: | fgenesh2_kg.7__2339__AT4G19600.1 |
| Ensembl Protein: | fgenesh2_kg.7__2339__AT4G19600.1 |
| Organism: | Arabidopsis lyrata |
| Taxa ID: | 81972 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nuclear speckle | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | fgenesh2_kg.7__2339__AT4G19600.1 | fgenesh2_kg.7__2339__AT4G19600.1 |
| UniProt | D7MGA4, D7MGA4_ARALL | |
| GeneBank | GL348719 | EFH46233.1 |
| RefSeq | XM_002869928.1 | XP_002869974.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MAGVLAAGDC SFGESGISSY SRNSNEKQDE VARWYFGRKE IEENSPSRLD SIDLKKETYL 60 61 RKSYCTFLQD LGMRLKVPQV TIATAIIFCH RFFIRQSHAR NDRRTIATVC MFLAGKVEET 120 121 PRPLKDVIVV SYEIIHKKDP TTAQKIKQKE VYEQQKELIL SGEKIVLSTL GFDFNVYHPY 180 181 KPLVEAIKKF KVAQNALAQV AWNFVNDGLR TSLCLQFKPH HIAAGAIFLA AKFLKVKLPS 240 241 DGEKVWWQEF DVTPRQLEDV SNQMLELYEQ NRVPASHGSE VESSVGGGSA HHVGSRPISA 300 301 RPTHEHSNSD NHGGSSKATQ NRSNDNGSGE AGSVITEQKG ERDIETKDSM HTENHPAHKS 360 361 RSGVEASGEE KTAKAGAHFL EDDKSRIVGT GDTPVSQSPK DIKLLRDKVK AKLEAKKVQG 420 421 EKTRKKDLVD EDDLIERELE DVELAVEDEK DIQNKSSMGT EHGEILDGNN LVVNTEEGEM 480 481 VDDVSSTVPV PSRKRKMGSP CEKQLGEGKR RHNNSENVEE GHKTNRGGSS HSHGDREPRR 540 541 HSQER 545 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCTGGAG TATTAGCTGC TGGGGATTGT TCATTCGGTG AGAGTGGCAT TTCATCTTAC 60 61 TCCAGGAATT CCAATGAAAA GCAGGACGAG GTTGCCCGCT GGTATTTTGG AAGGAAAGAA 120 121 ATAGAAGAAA ATTCACCATC AAGGTTGGAT AGTATTGACT TAAAGAAGGA AACATACCTC 180 181 CGCAAGTCAT ACTGTACATT TTTGCAGGAC TTAGGCATGA GATTAAAAGT TCCTCAGGTT 240 241 ACAATAGCTA CAGCAATAAT CTTCTGTCAT CGATTCTTCA TTCGCCAGTC ACATGCTAGG 300 301 AATGACAGAA GGACGATTGC TACAGTCTGC ATGTTCCTTG CTGGAAAAGT TGAAGAAACT 360 361 CCAAGGCCGT TAAAAGATGT TATTGTTGTC TCCTATGAGA TAATACACAA GAAGGATCCT 420 421 ACTACTGCAC AGAAAATCAA GCAAAAGGAA GTATATGAGC AACAAAAAGA GCTTATACTA 480 481 AGTGGAGAAA AGATTGTACT TTCTACGCTG GGGTTTGACT TCAACGTTTA TCATCCTTAT 540 541 AAACCTCTTG TAGAAGCGAT AAAGAAATTC AAGGTCGCAC AGAATGCTCT GGCCCAAGTT 600 601 GCATGGAATT TTGTTAACGA TGGTCTGCGG ACGTCACTCT GCCTGCAATT TAAGCCTCAC 660 661 CACATTGCAG CGGGAGCAAT TTTTCTTGCT GCGAAGTTCC TTAAAGTGAA ATTACCATCA 720 721 GATGGAGAGA AGGTTTGGTG GCAAGAATTT GATGTCACAC CTCGACAACT AGAGGATGTT 780 781 AGCAACCAAA TGCTTGAGCT CTATGAGCAA AACCGAGTTC CTGCATCTCA TGGAAGCGAA 840 841 GTCGAAAGTA GTGTAGGTGG AGGATCAGCT CATCATGTTG GGTCTAGGCC AATATCAGCA 900 901 CGTCCAACTC ATGAACATTC AAACTCTGAT AATCATGGGG GCTCTTCAAA AGCTACACAA 960 961 AACCGGAGCA ATGATAATGG GAGTGGTGAG GCAGGTAGTG TCATTACCGA GCAGAAGGGG 1020 1021 GAAAGAGATA TAGAAACGAA AGATAGCATG CATACTGAAA ATCATCCAGC CCATAAGTCT 1080 1081 AGATCAGGAG TTGAAGCATC TGGGGAGGAA AAAACAGCGA AAGCAGGTGC ACATTTCCTA 1140 1141 GAAGATGATA AATCTAGAAT TGTTGGTACG GGTGATACCC CAGTCAGCCA ATCCCCAAAA 1200 1201 GACATTAAAT TGCTTAGAGA TAAGGTGAAG GCCAAACTAG AGGCTAAGAA GGTCCAAGGT 1260 1261 GAAAAGACGA GGAAAAAGGA CTTGGTGGAT GAGGATGATT TAATCGAAAG AGAACTGGAA 1320 1321 GACGTGGAAT TAGCTGTTGA GGATGAGAAA GATATACAAA ACAAGAGCTC CATGGGTACA 1380 1381 GAACACGGCG AGATTCTTGA TGGAAACAAC TTGGTGGTCA ATACCGAGGA AGGTGAAATG 1440 1441 GTAGATGATG TTTCTTCAAC AGTGCCAGTG CCTAGCCGGA AGAGAAAAAT GGGAAGCCCT 1500 1501 TGTGAAAAAC AGTTAGGAGA AGGAAAGAGG CGACACAACA ACAGTGAGAA TGTAGAAGAA 1560 1561 GGTCACAAGA CAAACCGAGG AGGAAGTAGT CATAGTCATG GTGACCGAGA GCCAAGAAGA 1620 1621 CACTCCCAAG AGAGGTAG 1638 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Ori-1311 | Oryza indica | 90.5 | 1e-161 | 476 |
| LLPS-Orgl-2268 | Oryza glumaepatula | 89.67 | 4e-158 | 470 |
| LLPS-Brd-2430 | Brachypodium distachyon | 89.26 | 4e-160 | 473 |
| LLPS-Tra-0970 | Triticum aestivum | 88.43 | 1e-159 | 471 |
| LLPS-Hov-0506 | Hordeum vulgare | 88.07 | 2e-107 | 333 |
| LLPS-Cus-0272 | Cucumis sativus | 84.07 | 1e-165 | 491 |
| LLPS-Glm-0667 | Glycine max | 83.58 | 7e-166 | 492 |
| LLPS-Sob-2034 | Sorghum bicolor | 81.67 | 7e-145 | 433 |
| LLPS-Brn-2660 | Brassica napus | 79.93 | 0.0 | 791 |
| LLPS-Brr-1824 | Brassica rapa | 79.57 | 0.0 | 786 |
| LLPS-Php-2125 | Physcomitrella patens | 75.27 | 2e-149 | 454 |
| LLPS-Art-2711 | Arabidopsis thaliana | 72.85 | 0.0 | 710 |
| LLPS-Met-2624 | Medicago truncatula | 69.46 | 4e-172 | 506 |
| LLPS-Bro-1500 | Brassica oleracea | 67.84 | 0.0 | 645 |
| LLPS-Hea-1483 | Helianthus annuus | 61.95 | 2e-167 | 491 |
| LLPS-Pot-0090 | Populus trichocarpa | 61.53 | 0.0 | 586 |
| LLPS-Thc-0816 | Theobroma cacao | 60.63 | 0.0 | 617 |
| LLPS-Coc-0814 | Corchorus capsularis | 60.46 | 0.0 | 592 |
| LLPS-Gor-0088 | Gossypium raimondii | 60.43 | 0.0 | 618 |
| LLPS-Mae-2383 | Manihot esculenta | 60.08 | 1e-168 | 498 |
| LLPS-Prp-0257 | Prunus persica | 59.06 | 5e-172 | 508 |
| LLPS-Viv-1623 | Vitis vinifera | 58.68 | 2e-169 | 500 |
| LLPS-Sol-1309 | Solanum lycopersicum | 57.5 | 5e-106 | 331 |
| LLPS-Ors-2291 | Oryza sativa | 57.45 | 1e-95 | 305 |
| LLPS-Orm-1960 | Oryza meridionalis | 57.02 | 1e-94 | 303 |
| LLPS-Org-2026 | Oryza glaberrima | 57.02 | 1e-94 | 303 |
| LLPS-Dac-2387 | Daucus carota | 55.92 | 2e-91 | 289 |
| LLPS-Orp-1500 | Oryza punctata | 55.08 | 2e-95 | 311 |
| LLPS-Orb-1418 | Oryza barthii | 55.06 | 6e-95 | 309 |
| LLPS-Orbr-0914 | Oryza brachyantha | 54.81 | 3e-93 | 304 |
| LLPS-Orr-1174 | Oryza rufipogon | 54.66 | 1e-93 | 305 |
| LLPS-Phv-2217 | Phaseolus vulgaris | 54.01 | 3e-174 | 512 |
| LLPS-Nia-0186 | Nicotiana attenuata | 53.95 | 1e-105 | 333 |
| LLPS-Orni-0885 | Oryza nivara | 53.36 | 6e-93 | 304 |
| LLPS-Lep-1750 | Leersia perrieri | 51.53 | 1e-87 | 285 |
| LLPS-Sah-1746 | Sarcophilus harrisii | 37.9 | 5e-42 | 164 |
| LLPS-Scf-1118 | Scleropages formosus | 37.45 | 1e-37 | 151 |
| LLPS-Asm-4087 | Astyanax mexicanus | 37.05 | 8e-38 | 151 |
| LLPS-Dar-2552 | Danio rerio | 36.78 | 2e-43 | 168 |
| LLPS-Drm-1039 | Drosophila melanogaster | 36.61 | 1e-40 | 156 |
| LLPS-Ora-1773 | Ornithorhynchus anatinus | 36.4 | 1e-38 | 154 |
| LLPS-Orn-2361 | Oreochromis niloticus | 36.21 | 5e-41 | 161 |
| LLPS-Mod-0256 | Monodelphis domestica | 36.14 | 5e-41 | 161 |
| LLPS-Myl-1142 | Myotis lucifugus | 36.14 | 9e-38 | 152 |
| LLPS-Tag-2683 | Taeniopygia guttata | 36.07 | 1e-40 | 160 |
| LLPS-Pof-2134 | Poecilia formosa | 36.07 | 6e-41 | 160 |
| LLPS-Lac-0775 | Latimeria chalumnae | 35.97 | 1e-37 | 151 |
| LLPS-Anc-2343 | Anolis carolinensis | 35.89 | 5e-39 | 155 |
| LLPS-Gaga-1545 | Gallus gallus | 35.89 | 6e-40 | 158 |
| LLPS-Man-3479 | Macaca nemestrina | 35.89 | 1e-38 | 154 |
| LLPS-Pat-3683 | Pan troglodytes | 35.89 | 9e-39 | 154 |
| LLPS-Mal-3660 | Mandrillus leucophaeus | 35.89 | 1e-38 | 154 |
| LLPS-Paa-0939 | Papio anubis | 35.89 | 1e-38 | 154 |
| LLPS-Cea-4023 | Cercocebus atys | 35.89 | 1e-38 | 154 |
| LLPS-Chs-1547 | Chlorocebus sabaeus | 35.89 | 1e-38 | 154 |
| LLPS-Maf-0914 | Macaca fascicularis | 35.89 | 1e-38 | 154 |
| LLPS-Caj-1428 | Callithrix jacchus | 35.89 | 9e-39 | 155 |
| LLPS-Gaa-0336 | Gasterosteus aculeatus | 35.8 | 2e-40 | 159 |
| LLPS-Cap-0375 | Cavia porcellus | 35.69 | 8e-40 | 158 |
| LLPS-Caf-0561 | Canis familiaris | 35.69 | 3e-40 | 158 |
| LLPS-Bot-0763 | Bos taurus | 35.69 | 1e-39 | 157 |
| LLPS-Ova-3845 | Ovis aries | 35.69 | 1e-39 | 157 |
| LLPS-Fud-1521 | Fukomys damarensis | 35.69 | 9e-40 | 157 |
| LLPS-Ict-0532 | Ictidomys tridecemlineatus | 35.6 | 8e-40 | 158 |
| LLPS-Mum-1516 | Mus musculus | 35.46 | 2e-39 | 157 |
| LLPS-Mea-2818 | Mesocricetus auratus | 35.46 | 1e-39 | 157 |
| LLPS-Urm-1018 | Ursus maritimus | 35.43 | 1e-36 | 148 |
| LLPS-Ten-0445 | Tetraodon nigroviridis | 35.37 | 9e-41 | 159 |
| LLPS-Poa-3443 | Pongo abelii | 35.29 | 5e-39 | 155 |
| LLPS-Nol-0718 | Nomascus leucogenys | 35.29 | 4e-39 | 155 |
| LLPS-Hos-2246 | Homo sapiens | 35.29 | 4e-39 | 155 |
| LLPS-Loa-2804 | Loxodonta africana | 35.25 | 1e-39 | 157 |
| LLPS-Aim-0756 | Ailuropoda melanoleuca | 35.16 | 7e-38 | 152 |
| LLPS-Mup-2003 | Mustela putorius furo | 35.16 | 7e-38 | 152 |
| LLPS-Eqc-1363 | Equus caballus | 35.1 | 2e-39 | 157 |
| LLPS-Fec-3894 | Felis catus | 35.1 | 2e-39 | 157 |
| LLPS-Leo-0430 | Lepisosteus oculatus | 35.1 | 9e-38 | 151 |
| LLPS-Mam-1827 | Macaca mulatta | 35.08 | 1e-39 | 156 |
| LLPS-Cas-2807 | Carlito syrichta | 35.08 | 3e-40 | 154 |
| LLPS-Anp-2881 | Anas platyrhynchos | 35.08 | 1e-40 | 156 |
| LLPS-Meg-0787 | Meleagris gallopavo | 35.08 | 1e-39 | 156 |
| LLPS-Pap-3668 | Pan paniscus | 35.08 | 1e-39 | 156 |
| LLPS-Rhb-4681 | Rhinopithecus bieti | 35.08 | 8e-40 | 156 |
| LLPS-Orc-4171 | Oryctolagus cuniculus | 35.08 | 5e-40 | 157 |
| LLPS-Fia-3789 | Ficedula albicollis | 35.08 | 1e-39 | 156 |
| LLPS-Pes-2910 | Pelodiscus sinensis | 35.08 | 1e-39 | 156 |
| LLPS-Otg-2292 | Otolemur garnettii | 35.08 | 1e-39 | 156 |
| LLPS-Dio-3393 | Dipodomys ordii | 35.08 | 9e-40 | 156 |
| LLPS-Tut-2183 | Tursiops truncatus | 35.08 | 1e-39 | 156 |
| LLPS-Ran-2129 | Rattus norvegicus | 35.08 | 8e-40 | 156 |
| LLPS-Sus-0217 | Sus scrofa | 35.08 | 5e-40 | 156 |
| LLPS-Aon-1335 | Aotus nancymaae | 35.08 | 4e-40 | 154 |
| LLPS-Gog-2515 | Gorilla gorilla | 35.08 | 5e-40 | 155 |
| LLPS-Xet-1417 | Xenopus tropicalis | 34.96 | 3e-39 | 155 |
| LLPS-Tar-1075 | Takifugu rubripes | 34.93 | 9e-40 | 156 |
| LLPS-Icp-1971 | Ictalurus punctatus | 34.5 | 3e-39 | 154 |
| LLPS-Scm-2921 | Scophthalmus maximus | 34.06 | 1e-38 | 153 |
| LLPS-Orl-2909 | Oryzias latipes | 34.0 | 3e-39 | 154 |
| LLPS-Xim-2594 | Xiphophorus maculatus | 33.62 | 1e-38 | 152 |