LLPS-Arl-2134
EXGT-A1
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Xyloglucan endotransglucosylase/hydrolase |
| Gene Name: | EXGT-A1, ARALYDRAFT_480225 |
| Ensembl Gene: | fgenesh2_kg.3__2926__AT2G06850.1 |
| Ensembl Protein: | fgenesh2_kg.3__2926__AT2G06850.1 |
| Organism: | Arabidopsis lyrata |
| Taxa ID: | 81972 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ FUNCTION
| Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | fgenesh2_kg.3__2926__AT2G06850.1 | fgenesh2_kg.3__2926__AT2G06850.1 |
| UniProt | D7LA73, D7LA73_ARALL | |
| GeneBank | GL348715 | EFH60000.1 |
| RefSeq | XM_002883695.1 | XP_002883741.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MTVSSSPWAL MALFLMVSST MVMAIPPRKA IDVPFGRNYV PTWAFDHQKQ FNGGSELQLI 60 61 LDKYTGTGFQ SKGSYLFGHF SMHIKLPAGD TAGVVTAFYL SSTNNEHDEI DFEFLGNRTG 120 121 QPPILQTNVF TGGKGNREQR IYLWFDPSKA YHTYSILWNM YQIVFFVDNI PIRTFKNAKD 180 181 LGVRFPFNQP MKLYSSLWNA DDWATRGGLE KTNWANAPFI ASYKGFHIDG CQASVEAKYC 240 241 ATQGRMWWDQ NEFRDLDAEQ WRRLKWVRMK WTIYNYCTDR TRFPVMPAEC KRDRDA 296 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGACTGTTT CTTCATCTCC ATGGGCTCTG ATGGCTCTGT TTCTGATGGT TTCTTCAACA 60 61 ATGGTAATGG CAATTCCTCC ACGCAAGGCC ATTGATGTAC CCTTTGGGCG TAACTACGTC 120 121 CCAACTTGGG CTTTTGACCA CCAGAAACAG TTCAATGGCG GTTCTGAACT TCAGCTTATC 180 181 CTCGACAAAT ACACTGGCAC AGGGTTTCAA TCAAAAGGGT CATATTTGTT TGGACATTTT 240 241 AGTATGCACA TAAAGCTTCC GGCTGGTGAC ACAGCTGGAG TTGTCACAGC TTTCTATCTT 300 301 TCATCGACCA ACAACGAGCA TGACGAGATA GACTTTGAGT TTCTTGGGAA CAGAACAGGA 360 361 CAACCACCAA TATTGCAGAC AAATGTGTTC ACAGGAGGAA AAGGAAACAG AGAACAACGA 420 421 ATCTATCTCT GGTTTGATCC TTCTAAGGCT TATCACACTT ACTCAATCCT TTGGAACATG 480 481 TACCAGATCG TATTCTTTGT TGACAACATA CCAATCCGAA CGTTCAAGAA CGCTAAGGAT 540 541 TTAGGAGTAC GTTTCCCATT CAACCAACCG ATGAAGCTTT ACTCGAGCCT TTGGAACGCG 600 601 GATGATTGGG CCACGAGAGG TGGTTTAGAG AAAACCAATT GGGCCAATGC ACCTTTCATT 660 661 GCATCCTACA AAGGATTCCA CATTGATGGT TGCCAAGCTT CTGTGGAAGC CAAGTACTGT 720 721 GCCACCCAAG GCCGCATGTG GTGGGACCAA AATGAATTCC GTGACCTTGA CGCTGAGCAA 780 781 TGGCGCCGTC TCAAATGGGT TCGTATGAAG TGGACCATCT ACAACTATTG TACCGACCGG 840 841 ACTAGGTTCC CGGTTATGCC AGCGGAATGT AAAAGGGACA GAGATGCATA A 891 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Apoplast | |
Cellular Component | Chloroplast | |
Cellular Component | Membrane | |
Cellular Component | Plant-type cell wall | |
Cellular Component | Plasmodesma | |
Molecular Function | Hydrolase activity, hydrolyzing O-glycosyl compounds | |
Molecular Function | Xyloglucan:xyloglucosyl transferase activity | |
Biological Process | Cell wall biogenesis | |
Biological Process | Cell wall organization | |
Biological Process | Response to auxin | |
Biological Process | Response to low light intensity stimulus | |
Biological Process | Response to mechanical stimulus | |
Biological Process | Unidimensional cell growth | |
Biological Process | Xyloglucan metabolic process |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Art-1361 | Arabidopsis thaliana | 98.99 | 0.0 | 620 |
| LLPS-Brr-0142 | Brassica rapa | 95.95 | 0.0 | 600 |
| LLPS-Brn-3397 | Brassica napus | 95.95 | 0.0 | 600 |
| LLPS-Bro-2851 | Brassica oleracea | 95.61 | 0.0 | 599 |
| LLPS-Nia-1821 | Nicotiana attenuata | 71.97 | 7e-163 | 462 |