LLPS-Arl-1774
PGDH
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | D-3-phosphoglycerate dehydrogenase |
| Gene Name: | PGDH, ARALYDRAFT_471986 |
| Ensembl Gene: | fgenesh2_kg.1__1940__AT1G17745.1 |
| Ensembl Protein: | fgenesh2_kg.1__1940__AT1G17745.1 |
| Organism: | Arabidopsis lyrata |
| Taxa ID: | 81972 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | fgenesh2_kg.1__1940__AT1G17745.1 | fgenesh2_kg.1__1940__AT1G17745.1 |
| UniProt | D7KFI9, D7KFI9_ARALL | |
| GeneBank | GL348713 | EFH66505.1 |
| RefSeq | XM_002890200.1 | XP_002890246.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MAFSTSCSSV KAVNSRWTSP SPSPSSRFAV LPVFLHRRYA TSVKLTATSA ALKTVEQTTL 60 61 TEDNQFSTIG SDSDEYNPTL PKPRILVAEK LGEAGVNLLR EFGDVDCSYD LSPEDLKKKV 120 121 AESDALIVRS GTKVTREVFE AAKGRMKVVG RAGVGIDNVD LQAATEHGCL VVNAPTANTV 180 181 AAAEHGIALL ACMARNVAQA DASIKAGKWE RSKYVGVSLV GKTLAVMGFG KVGTEVARRA 240 241 KGLGMNVISH DPYAPADRAR ALGVDLVSFD QAISTADFVS LHMPLTPATK KVFNDETFSK 300 301 MKKGVRLINV ARGGVIDEDA LVRALDAGIV AQAALDVFCE EPPSKDSKLI QHENVTVTPH 360 361 LGASTKEAQE GVAIEIAEAV AGALRGELSA TAVNAPMVDP EFYLTREVSC PISIWSKGVQ 420 421 SIRVVYRSAR NRDDLDTRLL RAMITKGIIE PISDSYVNLV NADFIAKQKG LRISEERMVV 480 481 DSSPEYPVDS IQVQILNVES NFAGAVSDSG DISIEGKVKY GVPHLTCVGS FGVDVSLEGN 540 541 LILCRQVDQP GMIGQVGHIL GEQNVNVNFM SVGRTVLRKQ AIMAIGVDEE PDNKTLERIG 600 601 GVSAIEEFVF LKL 613 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCATTTT CAACTTCTTG TTCGTCCGTC AAAGCCGTCA ACTCACGGTG GACGTCTCCG 60 61 TCACCGTCAC CATCTTCTCG ATTCGCCGTC CTCCCTGTTT TCCTCCACCG CCGTTACGCA 120 121 ACAAGCGTCA AACTAACGGC CACAAGCGCC GCCTTAAAAA CCGTCGAGCA AACGACGTTA 180 181 ACAGAGGATA ACCAATTCTC CACCATCGGA TCTGATTCTG ATGAATACAA CCCAACGCTT 240 241 CCAAAGCCGA GGATCCTCGT CGCCGAGAAA CTCGGAGAAG CCGGCGTGAA TCTCCTCAGG 300 301 GAATTCGGTG ACGTTGACTG CTCTTACGAT CTTTCACCAG AGGATCTGAA GAAGAAAGTG 360 361 GCAGAGAGTG ACGCTCTGAT CGTGAGAAGT GGAACAAAAG TGACGAGGGA AGTGTTTGAG 420 421 GCGGCGAAGG GGCGGATGAA AGTGGTCGGA AGAGCCGGAG TTGGGATTGA CAATGTTGAT 480 481 CTGCAGGCGG CAACGGAGCA CGGCTGTTTG GTGGTTAATG CTCCGACGGC TAATACGGTG 540 541 GCCGCTGCCG AACATGGAAT TGCTTTGCTT GCTTGTATGG CACGTAACGT CGCTCAGGCC 600 601 GACGCTTCTA TTAAAGCCGG AAAATGGGAG AGGAGCAAGT ACGTCGGCGT ATCTCTCGTC 660 661 GGAAAAACCT TAGCCGTGAT GGGTTTCGGG AAAGTCGGGA CGGAGGTGGC GAGAAGAGCC 720 721 AAGGGTCTAG GCATGAACGT TATCTCCCAC GACCCTTACG CGCCAGCTGA CAGAGCCAGA 780 781 GCTCTCGGCG TCGATCTTGT CTCCTTTGAT CAAGCTATCT CCACCGCCGA TTTCGTCTCC 840 841 CTCCACATGC CTTTAACTCC GGCCACCAAA AAGGTCTTCA ACGACGAAAC CTTCTCGAAG 900 901 ATGAAGAAAG GTGTTCGTCT CATTAATGTC GCTAGAGGTG GTGTCATCGA TGAGGATGCG 960 961 CTCGTCAGAG CTCTTGATGC CGGAATTGTT GCTCAGGCAG CATTAGATGT GTTCTGTGAG 1020 1021 GAACCACCAT CGAAAGACAG CAAATTGATT CAGCATGAAA ATGTTACTGT GACACCTCAT 1080 1081 CTTGGAGCTA GCACAAAAGA AGCTCAGGAA GGTGTAGCCA TCGAGATAGC AGAGGCTGTA 1140 1141 GCAGGGGCAT TAAGAGGCGA GCTATCAGCT ACTGCGGTCA ATGCTCCAAT GGTTGATCCT 1200 1201 GAGTTCTATC TGACTAGGGA GGTTAGCTGT CCAATTAGCA TCTGGAGTAA AGGAGTACAG 1260 1261 TCCATTAGGG TGGTGTATCG GTCAGCTCGG AACCGAGATG ATTTGGATAC TAGACTACTT 1320 1321 CGTGCAATGA TCACAAAGGG AATCATTGAA CCGATCTCAG ATTCATATGT CAACCTTGTG 1380 1381 AATGCGGATT TCATAGCTAA ACAAAAGGGT CTTCGTATTA GTGAGGAACG AATGGTGGTT 1440 1441 GATTCATCAC CGGAGTACCC TGTTGATTCC ATCCAAGTTC AGATTTTGAA TGTGGAATCG 1500 1501 AACTTCGCTG GTGCTGTCTC TGATTCTGGT GATATAAGTA TCGAAGGGAA GGTGAAGTAC 1560 1561 GGAGTTCCGC ATTTAACTTG TGTCGGATCA TTTGGTGTGG ATGTGAGCCT TGAAGGGAAT 1620 1621 CTGATACTGT GCAGGCAAGT GGATCAACCA GGGATGATTG GACAGGTTGG TCACATACTT 1680 1681 GGGGAACAAA ACGTGAATGT GAATTTCATG AGTGTTGGAA GAACGGTCTT GAGGAAACAA 1740 1741 GCGATAATGG CGATTGGAGT TGATGAAGAA CCAGACAACA AAACACTTGA GAGGATTGGG 1800 1801 GGCGTCTCTG CGATTGAAGA GTTTGTGTTT CTGAAACTAT AA 1842 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Art-0873 | Arabidopsis thaliana | 89.4 | 0.0 | 1048 |
| LLPS-Brn-2627 | Brassica napus | 86.1 | 0.0 | 974 |
| LLPS-Brr-1867 | Brassica rapa | 85.94 | 0.0 | 974 |
| LLPS-Bro-0365 | Brassica oleracea | 85.78 | 0.0 | 973 |
| LLPS-Nia-0880 | Nicotiana attenuata | 78.36 | 0.0 | 813 |
| LLPS-Prp-1377 | Prunus persica | 77.68 | 0.0 | 784 |
| LLPS-Dac-0578 | Daucus carota | 77.53 | 0.0 | 770 |
| LLPS-Sot-0719 | Solanum tuberosum | 77.49 | 0.0 | 805 |
| LLPS-Glm-2533 | Glycine max | 77.14 | 0.0 | 798 |
| LLPS-Pot-2593 | Populus trichocarpa | 77.0 | 0.0 | 798 |
| LLPS-Sol-0684 | Solanum lycopersicum | 76.96 | 0.0 | 798 |
| LLPS-Hea-2095 | Helianthus annuus | 76.8 | 0.0 | 749 |
| LLPS-Mua-1812 | Musa acuminata | 76.43 | 0.0 | 759 |
| LLPS-Thc-0193 | Theobroma cacao | 76.3 | 0.0 | 793 |
| LLPS-Cus-1739 | Cucumis sativus | 75.55 | 0.0 | 753 |
| LLPS-Amt-1101 | Amborella trichopoda | 75.42 | 0.0 | 577 |
| LLPS-Gor-1805 | Gossypium raimondii | 75.23 | 0.0 | 742 |
| LLPS-Viv-1077 | Vitis vinifera | 75.08 | 0.0 | 794 |
| LLPS-Coc-0024 | Corchorus capsularis | 74.82 | 0.0 | 743 |
| LLPS-Mae-1047 | Manihot esculenta | 74.59 | 0.0 | 745 |
| LLPS-Vir-0166 | Vigna radiata | 74.25 | 0.0 | 791 |
| LLPS-Met-2490 | Medicago truncatula | 74.17 | 0.0 | 802 |
| LLPS-Via-1784 | Vigna angularis | 73.91 | 0.0 | 788 |
| LLPS-Brd-1925 | Brachypodium distachyon | 73.85 | 0.0 | 735 |
| LLPS-Phv-1338 | Phaseolus vulgaris | 73.49 | 0.0 | 781 |
| LLPS-Sei-0507 | Setaria italica | 73.49 | 0.0 | 736 |
| LLPS-Hov-0388 | Hordeum vulgare | 73.44 | 0.0 | 737 |
| LLPS-Orbr-0564 | Oryza brachyantha | 73.39 | 0.0 | 590 |
| LLPS-Orb-1487 | Oryza barthii | 73.39 | 0.0 | 637 |
| LLPS-Sob-1912 | Sorghum bicolor | 73.3 | 0.0 | 732 |
| LLPS-Orp-0945 | Oryza punctata | 73.21 | 0.0 | 729 |
| LLPS-Lep-0121 | Leersia perrieri | 73.03 | 0.0 | 729 |
| LLPS-Zem-0107 | Zea mays | 72.93 | 0.0 | 728 |
| LLPS-Org-0401 | Oryza glaberrima | 72.84 | 0.0 | 724 |
| LLPS-Orm-0704 | Oryza meridionalis | 72.84 | 0.0 | 723 |
| LLPS-Orgl-0379 | Oryza glumaepatula | 72.84 | 0.0 | 724 |
| LLPS-Orni-0731 | Oryza nivara | 72.84 | 0.0 | 724 |
| LLPS-Orr-1565 | Oryza rufipogon | 72.66 | 0.0 | 723 |
| LLPS-Ors-0527 | Oryza sativa | 72.66 | 0.0 | 723 |
| LLPS-Ori-0977 | Oryza indica | 72.66 | 0.0 | 723 |
| LLPS-Tra-1080 | Triticum aestivum | 72.24 | 0.0 | 731 |
| LLPS-Tru-0590 | Triticum urartu | 72.22 | 0.0 | 583 |
| LLPS-Php-0687 | Physcomitrella patens | 69.89 | 0.0 | 679 |
| LLPS-Sem-1260 | Selaginella moellendorffii | 69.72 | 0.0 | 711 |
| LLPS-Chr-1675 | Chlamydomonas reinhardtii | 53.21 | 2e-164 | 491 |
| LLPS-Gas-0591 | Galdieria sulphuraria | 48.58 | 4e-127 | 392 |
| LLPS-Caf-2497 | Canis familiaris | 46.12 | 5e-64 | 226 |
| LLPS-Cii-0671 | Ciona intestinalis | 45.88 | 3e-68 | 237 |
| LLPS-Cas-2437 | Carlito syrichta | 45.87 | 6e-70 | 240 |
| LLPS-Cym-0784 | Cyanidioschyzon merolae | 45.17 | 8e-115 | 363 |
| LLPS-Cis-1656 | Ciona savignyi | 44.74 | 3e-59 | 205 |
| LLPS-Drm-1167 | Drosophila melanogaster | 44.56 | 4e-68 | 231 |
| LLPS-Asm-1851 | Astyanax mexicanus | 44.37 | 3e-69 | 240 |
| LLPS-Cae-1837 | Caenorhabditis elegans | 44.06 | 8e-69 | 233 |
| LLPS-Pytr-1609 | Pyrenophora triticirepentis | 43.34 | 4e-113 | 357 |
| LLPS-Dos-0103 | Dothistroma septosporum | 42.75 | 2e-105 | 338 |
| LLPS-Pyt-1559 | Pyrenophora teres | 42.71 | 7e-112 | 354 |
| LLPS-Phn-1323 | Phaeosphaeria nodorum | 42.59 | 8e-109 | 345 |
| LLPS-Dar-2742 | Danio rerio | 42.5 | 3e-67 | 234 |
| LLPS-Zyt-0324 | Zymoseptoria tritici | 42.31 | 5e-104 | 333 |
| LLPS-Ved-0325 | Verticillium dahliae | 42.3 | 2e-92 | 305 |
| LLPS-Sah-2963 | Sarcophilus harrisii | 42.18 | 2e-75 | 256 |
| LLPS-Ten-2761 | Tetraodon nigroviridis | 41.69 | 3e-66 | 231 |
| LLPS-Lem-1052 | Leptosphaeria maculans | 41.65 | 2e-107 | 344 |
| LLPS-Beb-1200 | Beauveria bassiana | 41.42 | 3e-101 | 327 |
| LLPS-Ict-0923 | Ictidomys tridecemlineatus | 41.29 | 8e-77 | 260 |
| LLPS-Fus-1530 | Fusarium solani | 41.19 | 3e-97 | 315 |
| LLPS-Orc-1371 | Oryctolagus cuniculus | 41.15 | 9e-79 | 265 |
| LLPS-Chc-0076 | Chondrus crispus | 41.1 | 3e-109 | 347 |
| LLPS-Ran-4467 | Rattus norvegicus | 40.75 | 8e-78 | 263 |
| LLPS-Cogr-0712 | Colletotrichum graminicola | 40.71 | 3e-94 | 307 |
| LLPS-Eqc-4526 | Equus caballus | 40.3 | 5e-76 | 258 |
| LLPS-Anc-3176 | Anolis carolinensis | 40.25 | 3e-70 | 243 |
| LLPS-Mum-3332 | Mus musculus | 40.25 | 3e-77 | 261 |
| LLPS-Sus-3383 | Sus scrofa | 40.25 | 1e-75 | 257 |
| LLPS-Nef-0226 | Neosartorya fischeri | 40.24 | 5e-101 | 326 |
| LLPS-Cap-2232 | Cavia porcellus | 40.19 | 1e-77 | 262 |
| LLPS-Urm-3734 | Ursus maritimus | 40.0 | 2e-76 | 259 |
| LLPS-Fec-2791 | Felis catus | 40.0 | 1e-76 | 260 |
| LLPS-Loa-2685 | Loxodonta africana | 40.0 | 2e-75 | 256 |
| LLPS-Aim-3542 | Ailuropoda melanoleuca | 40.0 | 2e-76 | 259 |
| LLPS-Bot-3221 | Bos taurus | 40.0 | 9e-77 | 260 |
| LLPS-Caj-4768 | Callithrix jacchus | 40.0 | 2e-74 | 254 |
| LLPS-Mam-3273 | Macaca mulatta | 39.95 | 1e-77 | 263 |
| LLPS-Man-2098 | Macaca nemestrina | 39.95 | 1e-77 | 263 |
| LLPS-Maf-1155 | Macaca fascicularis | 39.95 | 1e-77 | 263 |
| LLPS-Ora-2954 | Ornithorhynchus anatinus | 39.95 | 1e-74 | 254 |
| LLPS-Mup-2395 | Mustela putorius furo | 39.9 | 2e-75 | 256 |
| LLPS-Nol-4555 | Nomascus leucogenys | 39.71 | 7e-77 | 261 |
| LLPS-Poa-0195 | Pongo abelii | 39.71 | 1e-77 | 262 |
| LLPS-Rhb-1166 | Rhinopithecus bieti | 39.71 | 1e-76 | 261 |
| LLPS-Hos-2297 | Homo sapiens | 39.71 | 1e-77 | 262 |
| LLPS-Pat-0447 | Pan troglodytes | 39.71 | 4e-77 | 262 |
| LLPS-Pap-3852 | Pan paniscus | 39.71 | 4e-77 | 262 |
| LLPS-Paa-4070 | Papio anubis | 39.71 | 5e-77 | 261 |
| LLPS-Fud-2521 | Fukomys damarensis | 39.71 | 3e-77 | 261 |
| LLPS-Chs-3657 | Chlorocebus sabaeus | 39.71 | 2e-77 | 262 |
| LLPS-Aon-3320 | Aotus nancymaae | 39.71 | 2e-77 | 263 |
| LLPS-Trv-1019 | Trichoderma virens | 39.65 | 2e-103 | 332 |
| LLPS-Ova-3645 | Ovis aries | 39.55 | 7e-75 | 255 |
| LLPS-Dio-1652 | Dipodomys ordii | 39.55 | 2e-74 | 254 |
| LLPS-Meg-2509 | Meleagris gallopavo | 39.18 | 1e-75 | 256 |
| LLPS-Otg-4112 | Otolemur garnettii | 39.15 | 2e-77 | 262 |
| LLPS-Mod-3886 | Monodelphis domestica | 39.04 | 7e-77 | 260 |
| LLPS-Mao-1194 | Magnaporthe oryzae | 39.04 | 2e-98 | 318 |
| LLPS-Asc-1439 | Aspergillus clavatus | 39.04 | 7e-31 | 128 |
| LLPS-Trr-1262 | Trichoderma reesei | 39.01 | 2e-105 | 336 |
| LLPS-Coo-0508 | Colletotrichum orbiculare | 39.0 | 3e-93 | 305 |
| LLPS-Fuo-0938 | Fusarium oxysporum | 38.91 | 2e-82 | 275 |
| LLPS-Mea-3509 | Mesocricetus auratus | 38.73 | 5e-57 | 205 |
| LLPS-Gog-3373 | Gorilla gorilla | 38.55 | 3e-73 | 252 |
| LLPS-Fuv-1268 | Fusarium verticillioides | 38.55 | 2e-81 | 273 |
| LLPS-Mal-4622 | Mandrillus leucophaeus | 38.01 | 2e-67 | 236 |
| LLPS-Cea-3379 | Cercocebus atys | 38.01 | 1e-67 | 236 |
| LLPS-Cog-0873 | Colletotrichum gloeosporioides | 37.57 | 7e-84 | 279 |
| LLPS-Usm-1543 | Ustilago maydis | 37.35 | 9e-42 | 162 |
| LLPS-Gag-1617 | Gaeumannomyces graminis | 37.1 | 2e-30 | 126 |
| LLPS-Fia-2397 | Ficedula albicollis | 36.97 | 2e-57 | 206 |
| LLPS-Spr-1549 | Sporisorium reilianum | 36.75 | 2e-39 | 155 |
| LLPS-Asfu-0985 | Aspergillus fumigatus | 36.7 | 4e-88 | 293 |
| LLPS-Gaa-3041 | Gasterosteus aculeatus | 36.21 | 7e-75 | 255 |
| LLPS-Scm-3793 | Scophthalmus maximus | 36.06 | 1e-71 | 248 |
| LLPS-Myl-4310 | Myotis lucifugus | 35.71 | 6e-33 | 133 |
| LLPS-Pof-3926 | Poecilia formosa | 35.59 | 5e-74 | 253 |
| LLPS-Xim-3288 | Xiphophorus maculatus | 35.59 | 8e-75 | 255 |
| LLPS-Map-1146 | Magnaporthe poae | 35.47 | 5e-38 | 150 |
| LLPS-Icp-1894 | Ictalurus punctatus | 35.19 | 4e-75 | 256 |
| LLPS-Xet-1083 | Xenopus tropicalis | 35.1 | 1e-68 | 238 |
| LLPS-Orn-0907 | Oreochromis niloticus | 35.07 | 1e-75 | 258 |
| LLPS-Leo-2604 | Lepisosteus oculatus | 35.02 | 1e-79 | 268 |
| LLPS-Pes-0050 | Pelodiscus sinensis | 34.38 | 4e-30 | 124 |
| LLPS-Scf-0250 | Scleropages formosus | 34.38 | 2e-71 | 248 |
| LLPS-Orl-2157 | Oryzias latipes | 34.17 | 3e-70 | 243 |
| LLPS-Scp-1464 | Schizosaccharomyces pombe | 34.11 | 2e-37 | 149 |
| LLPS-Mel-0865 | Melampsora laricipopulina | 34.0 | 2e-34 | 139 |
| LLPS-Nec-0087 | Neurospora crassa | 33.89 | 2e-36 | 145 |
| LLPS-Scc-1529 | Schizosaccharomyces cryophilus | 33.84 | 6e-37 | 147 |
| LLPS-Crn-0130 | Cryptococcus neoformans | 33.63 | 4e-33 | 137 |
| LLPS-Tar-1518 | Takifugu rubripes | 33.58 | 2e-65 | 230 |
| LLPS-Abg-0571 | Absidia glauca | 33.46 | 5e-32 | 130 |
| LLPS-Put-1286 | Puccinia triticina | 33.43 | 9e-35 | 141 |
| LLPS-Miv-1555 | Microbotryum violaceum | 33.33 | 1e-30 | 129 |
| LLPS-Kop-0221 | Komagataella pastoris | 33.33 | 1e-34 | 140 |
| LLPS-Scj-1596 | Schizosaccharomyces japonicus | 33.11 | 2e-35 | 143 |
| LLPS-Scs-0888 | Sclerotinia sclerotiorum | 32.93 | 4e-33 | 136 |
| LLPS-Gaga-0790 | Gallus gallus | 32.92 | 1e-30 | 126 |
| LLPS-Ast-1020 | Aspergillus terreus | 32.89 | 1e-33 | 138 |
| LLPS-Pug-1427 | Puccinia graminis | 32.83 | 8e-34 | 138 |
| LLPS-Asn-1438 | Aspergillus nidulans | 32.77 | 2e-34 | 140 |
| LLPS-Asf-0392 | Aspergillus flavus | 32.21 | 8e-34 | 139 |
| LLPS-Blg-0992 | Blumeria graminis | 31.99 | 4e-30 | 127 |
| LLPS-Asni-1011 | Aspergillus niger | 31.88 | 6e-33 | 135 |
| LLPS-Asg-0711 | Ashbya gossypii | 31.42 | 1e-34 | 141 |
| LLPS-Yal-0126 | Yarrowia lipolytica | 31.21 | 2e-30 | 129 |
| LLPS-Sac-1339 | Saccharomyces cerevisiae | 31.09 | 2e-35 | 143 |
| LLPS-Tum-1557 | Tuber melanosporum | 30.94 | 7e-29 | 124 |
| LLPS-Lac-4082 | Latimeria chalumnae | 30.89 | 1e-43 | 168 |