LLPS-Arl-0890
ARALYDRAFT_487918
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | CBS domain-containing protein |
| Gene Name: | ARALYDRAFT_487918 |
| Ensembl Gene: | fgenesh2_kg.6__1052__AT5G10860.1 |
| Ensembl Protein: | fgenesh2_kg.6__1052__AT5G10860.1 |
| Organism: | Arabidopsis lyrata |
| Taxa ID: | 81972 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | fgenesh2_kg.6__1052__AT5G10860.1 | fgenesh2_kg.6__1052__AT5G10860.1 |
| UniProt | D7M3J3, D7M3J3_ARALL | |
| GeneBank | GL348718 | EFH49740.1 |
| RefSeq | XM_002873435.1 | XP_002873481.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MQAVVRSLVS GGNVVKASVL QHLRVINPAI QPSVFCSRSE STQPARMEET GFESTTISDV 60 61 MKSKGKSADG SWLWCTTDDT VYDAVKSMTQ HNVGALVVVK PGEQQVLAGI ITERDYLRKI 120 121 IVQGRSSKST KVGDIMTEEN KLITVTPETK VLRAMQLMTD NRIRHIPVIK DKGMIGMVSI 180 181 GDVVRAVVHE HREELQRLNA FIQGGY 206 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGCAAGCTG TGGTTAGATC CTTGGTCTCC GGTGGAAATG TTGTGAAAGC TTCTGTGCTG 60 61 CAACATCTCC GTGTGATTAA CCCGGCGATT CAGCCTTCTG TGTTTTGTTC ACGCTCTGAA 120 121 TCAACTCAAC CTGCTCGTAT GGAGGAGACT GGATTCGAGA GCACAACTAT TTCCGATGTC 180 181 ATGAAATCCA AAGGCAAAAG TGCTGATGGA TCTTGGCTTT GGTGTACTAC TGATGACACT 240 241 GTTTATGATG CTGTTAAATC CATGACACAA CACAATGTTG GTGCCTTGGT GGTTGTGAAA 300 301 CCTGGTGAGC AACAAGTTCT TGCTGGTATC ATTACTGAGA GAGATTATCT ACGGAAGATT 360 361 ATAGTGCAAG GGAGATCATC CAAATCAACA AAAGTTGGAG ACATTATGAC TGAAGAGAAT 420 421 AAGCTTATCA CTGTGACACC GGAGACCAAG GTCTTGCGTG CTATGCAACT GATGACAGAT 480 481 AACCGAATCA GGCATATTCC GGTAATCAAA GACAAGGGCA TGATCGGAAT GGTGTCCATA 540 541 GGAGATGTGG TCCGTGCTGT GGTTCATGAG CATAGAGAGG AGCTTCAACG CCTAAATGCG 600 601 TTTATTCAGG GAGGTTACTA G 621 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Art-1270 | Arabidopsis thaliana | 96.6 | 5e-135 | 384 |
| LLPS-Brr-1791 | Brassica rapa | 93.24 | 4e-130 | 372 |
| LLPS-Bro-2826 | Brassica oleracea | 93.2 | 2e-130 | 372 |
| LLPS-Brn-2606 | Brassica napus | 92.75 | 2e-129 | 370 |
| LLPS-Lep-0464 | Leersia perrieri | 84.48 | 7e-55 | 177 |
| LLPS-Met-1961 | Medicago truncatula | 81.07 | 1e-110 | 324 |
| LLPS-Orr-0859 | Oryza rufipogon | 80.86 | 9e-86 | 261 |
| LLPS-Mae-0540 | Manihot esculenta | 80.58 | 6e-109 | 318 |
| LLPS-Prp-0909 | Prunus persica | 80.58 | 2e-110 | 322 |
| LLPS-Viv-0429 | Vitis vinifera | 80.1 | 1e-106 | 314 |
| LLPS-Thc-0314 | Theobroma cacao | 79.61 | 2e-107 | 314 |
| LLPS-Hea-2539 | Helianthus annuus | 79.61 | 1e-105 | 311 |
| LLPS-Pot-0699 | Populus trichocarpa | 79.61 | 2e-107 | 314 |
| LLPS-Mua-1775 | Musa acuminata | 78.16 | 9e-106 | 313 |
| LLPS-Dac-1168 | Daucus carota | 78.16 | 1e-106 | 312 |
| LLPS-Via-2389 | Vigna angularis | 78.16 | 2e-106 | 311 |
| LLPS-Phv-0968 | Phaseolus vulgaris | 78.16 | 9e-106 | 310 |
| LLPS-Sot-1880 | Solanum tuberosum | 77.83 | 1e-101 | 299 |
| LLPS-Amt-1789 | Amborella trichopoda | 77.51 | 2e-102 | 303 |
| LLPS-Vir-1442 | Vigna radiata | 77.47 | 2e-98 | 292 |
| LLPS-Glm-1919 | Glycine max | 77.18 | 8e-104 | 305 |
| LLPS-Nia-1705 | Nicotiana attenuata | 77.18 | 2e-105 | 309 |
| LLPS-Sol-2228 | Solanum lycopersicum | 76.7 | 2e-99 | 294 |
| LLPS-Sob-1646 | Sorghum bicolor | 76.21 | 5e-100 | 297 |
| LLPS-Tra-0107 | Triticum aestivum | 74.76 | 2e-102 | 301 |
| LLPS-Hov-0904 | Hordeum vulgare | 74.27 | 7e-101 | 298 |
| LLPS-Sei-1664 | Setaria italica | 73.79 | 5e-98 | 290 |
| LLPS-Brd-0783 | Brachypodium distachyon | 73.79 | 4e-101 | 298 |
| LLPS-Orbr-1588 | Oryza brachyantha | 72.46 | 1e-97 | 289 |
| LLPS-Orp-2049 | Oryza punctata | 72.33 | 1e-98 | 293 |
| LLPS-Orm-1632 | Oryza meridionalis | 71.84 | 3e-98 | 291 |
| LLPS-Orni-1575 | Oryza nivara | 71.36 | 2e-96 | 288 |
| LLPS-Orb-1967 | Oryza barthii | 71.36 | 4e-97 | 289 |
| LLPS-Ori-1442 | Oryza indica | 71.36 | 4e-97 | 289 |
| LLPS-Ors-2437 | Oryza sativa | 71.36 | 2e-97 | 289 |
| LLPS-Org-0743 | Oryza glaberrima | 71.36 | 3e-97 | 289 |
| LLPS-Cus-1707 | Cucumis sativus | 71.24 | 5e-100 | 296 |
| LLPS-Orgl-1151 | Oryza glumaepatula | 70.87 | 6e-97 | 288 |
| LLPS-Php-1334 | Physcomitrella patens | 70.81 | 9e-88 | 264 |
| LLPS-Sem-0892 | Selaginella moellendorffii | 70.19 | 1e-89 | 270 |
| LLPS-Gor-1533 | Gossypium raimondii | 66.67 | 1e-96 | 288 |
| LLPS-Zem-2546 | Zea mays | 52.61 | 7e-81 | 249 |
| LLPS-Gas-0327 | Galdieria sulphuraria | 49.68 | 2e-34 | 129 |
| LLPS-Tru-0634 | Triticum urartu | 46.74 | 6e-50 | 169 |
| LLPS-Chc-0067 | Chondrus crispus | 45.75 | 4e-33 | 127 |
| LLPS-Osl-1144 | Ostreococcus lucimarinus | 45.16 | 8e-15 | 72.4 |
| LLPS-Cym-0864 | Cyanidioschyzon merolae | 42.07 | 1e-21 | 94.4 |