LLPS-Anp-1704
RBM12
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | RNA-binding protein 12 |
| Gene Name: | RBM12, Anapl_04462 |
| Ensembl Gene: | ENSAPLG00000001686.1 |
| Ensembl Protein: | ENSAPLP00000001108.1 |
| Organism: | Anas platyrhynchos |
| Taxa ID: | 8839 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Stress granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSAPLT00000001679.1 | ENSAPLP00000001108.1 |
| UniProt | R0LL58, R0LL58_ANAPL | |
| GeneBank | KB742967, ADON01061685 | , EOB02395.1 |
| RefSeq | XM_005018027.2 | XP_005018084.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MAVVIRLQGL PIVAGTMDIR HFFSGLTIPD GGVHIVGGEL GEAFIVFATD EDARLGMMRT 60 61 GGTIKGSKVT LLLSSKTEMQ NMIELSRRRF ETANLDMPPA NASRSGPPPS SGMSGRVNLP 120 121 TTVPNFNNPS PSVVTASTTV HESNKNISTF STASMGTAPP NLGSTFGSPT FSSTIPSTAS 180 181 PMNTVPPPPI PPIPAMPSLP PMPSIPPIPV PPPVPTLPPV PPVPPIPPVP PVPPMTPMPP 240 241 ISGMPPMNPP PVAPLPTGMN GSGAAVNMNS GLNPLFIGPM NPVNPIQMNS QNSVKPIPIN 300 301 PDDLYVSVHG MPFSATESDV KDFFLGLRVD AVHMLKDHVG RNNGNGLVKF FSPQDTFEAL 360 361 KRNRMLMIQR YVEVSPATER QWVAAGGHIT FKQTMGPSGQ PHPPPPQAHS RSKSPSGQKR 420 421 SRSRSPHEQG FCVYLKGLPF ESENKHVIDF FKKLDIVEDS IYIAYGPNGK AIGEGFVEFR 480 481 NEADYKAALC HHKQYIGNRF IQVHPITKKA MLEKIELIRK RLQNFNYDQR EIIMNAEAES 540 541 GMPKLCAHIS NIPYNITKME ILQFLEGLAV EENSVQILVD NNGQGLGQAL VQFKAEDDAR 600 601 KAERLHRKKL NGRDVVLRLI TVEEMRDIER NPQSQGKKIL KIPIQGNAPV PGAQAPAAEE 660 661 HAFLGGNPKE ANNGPPFNFP GNFSGSGAFG PPLPPPGLGG FPDARPGIPA VASSGLPAAG 720 721 IEVPGFAGGP GNLSGPSGFG GGPQGFGNGP GNLSGPPNFG GGPPGITGGL GHLSGPPAFG 780 781 PGPGNIHISG PPGFGTGSGK PGPTVIKVQN MPFTVSVDEI LDFFYGYQVI PSSVCLKYNE 840 841 KGMPTGEAMV AFESRDEAMA AVVDLNDRPI GSRKVKLVLG 880 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCTGTGG TCATCCGCTT GCAAGGTCTC CCGATTGTGG CGGGGACCAT GGACATTCGC 60 61 CACTTCTTCT CTGGATTGAC CATTCCTGAT GGGGGCGTGC ATATTGTAGG GGGTGAACTG 120 121 GGTGAGGCTT TCATCGTTTT TGCCACTGAT GAAGATGCAA GGCTTGGTAT GATGCGCACA 180 181 GGTGGTACAA TTAAAGGGTC TAAAGTAACA CTATTACTAA GCAGTAAAAC CGAAATGCAA 240 241 AACATGATAG AACTCAGTCG TAGGCGTTTT GAAACTGCCA ATCTAGATAT GCCACCAGCA 300 301 AATGCTAGCA GGTCAGGACC ACCACCTAGT TCTGGAATGA GTGGAAGGGT TAACTTGCCC 360 361 ACTACTGTAC CTAACTTTAA TAACCCTTCT CCTAGTGTAG TAACAGCTTC AACTACTGTG 420 421 CATGAGAGCA ATAAAAACAT ATCCACATTT TCTACTGCCA GTATGGGGAC TGCACCTCCA 480 481 AATCTTGGGA GTACCTTTGG TAGCCCAACA TTTAGCTCGA CTATACCTAG TACAGCGTCC 540 541 CCGATGAATA CAGTACCTCC TCCACCAATC CCTCCTATTC CAGCTATGCC ATCTTTGCCA 600 601 CCAATGCCTT CTATTCCCCC AATCCCTGTT CCTCCTCCTG TGCCCACACT GCCTCCTGTT 660 661 CCTCCGGTTC CCCCAATACC CCCTGTGCCC CCTGTACCCC CGATGACGCC TATGCCTCCC 720 721 ATATCGGGAA TGCCTCCTAT GAATCCTCCA CCCGTAGCAC CTTTACCCAC TGGAATGAAT 780 781 GGGTCTGGAG CAGCAGTGAA TATGAACAGC GGCTTGAATC CATTGTTTAT TGGTCCCATG 840 841 AATCCTGTAA ATCCTATCCA GATGAATTCT CAAAATAGTG TCAAACCAAT TCCAATCAAT 900 901 CCAGACGATT TGTATGTCAG CGTTCATGGA ATGCCCTTTT CTGCAACAGA ATCTGATGTG 960 961 AAAGACTTTT TCCTTGGGCT CCGTGTGGAT GCAGTCCATA TGCTGAAGGA TCATGTAGGT 1020 1021 CGAAATAATG GAAACGGACT AGTTAAGTTC TTTTCTCCTC AAGATACGTT TGAAGCACTG 1080 1081 AAGCGAAACA GAATGCTGAT GATTCAGCGC TATGTTGAAG TTAGTCCTGC AACAGAGAGA 1140 1141 CAGTGGGTGG CTGCTGGAGG CCACATAACT TTCAAGCAAA CCATGGGTCC CTCTGGGCAA 1200 1201 CCGCACCCTC CTCCTCCACA GGCTCATTCT AGGTCCAAAT CTCCTAGCGG ACAGAAAAGG 1260 1261 TCACGATCTA GATCTCCCCA TGAACAGGGT TTCTGTGTTT ATTTGAAAGG TCTTCCATTT 1320 1321 GAATCGGAGA ACAAACATGT AATAGATTTT TTTAAAAAGC TGGATATAGT TGAAGACAGC 1380 1381 ATCTATATAG CTTATGGACC TAATGGGAAG GCAATTGGAG AGGGTTTTGT TGAGTTCAGA 1440 1441 AATGAAGCTG ATTACAAAGC AGCTTTGTGT CATCATAAGC AGTACATAGG GAATCGCTTC 1500 1501 ATTCAAGTTC ATCCAATTAC TAAAAAGGCA ATGTTAGAAA AGATAGAGCT GATTCGTAAA 1560 1561 AGATTGCAGA ACTTTAACTA TGACCAGAGA GAAATCATCA TGAATGCTGA GGCAGAGTCA 1620 1621 GGTATGCCAA AATTGTGTGC ACATATATCT AATATTCCGT ACAATATAAC AAAAATGGAA 1680 1681 ATCCTTCAGT TTCTAGAGGG ACTGGCAGTA GAAGAAAACT CCGTACAAAT TCTTGTTGAT 1740 1741 AATAATGGGC AAGGCTTAGG ACAAGCACTG GTTCAGTTTA AAGCTGAAGA TGATGCTCGT 1800 1801 AAGGCAGAGC GTTTGCACCG TAAAAAGCTG AATGGAAGAG ATGTTGTGTT ACGTTTGATT 1860 1861 ACTGTAGAAG AAATGAGAGA TATCGAGAGA AACCCACAGT CTCAAGGGAA AAAGATACTG 1920 1921 AAAATACCAA TACAAGGAAA TGCACCTGTG CCCGGAGCAC AGGCCCCTGC TGCGGAGGAG 1980 1981 CATGCCTTCT TGGGGGGGAA TCCTAAAGAA GCGAACAATG GCCCTCCGTT TAATTTCCCT 2040 2041 GGTAACTTTA GTGGGTCTGG CGCATTTGGT CCTCCTCTGC CACCACCTGG ATTAGGTGGC 2100 2101 TTTCCTGATG CTAGACCAGG AATACCTGCA GTCGCAAGTA GTGGTTTGCC TGCTGCAGGT 2160 2161 ATTGAGGTCC CAGGTTTTGC AGGTGGTCCT GGTAATTTGA GTGGACCGTC AGGTTTTGGA 2220 2221 GGGGGCCCTC AGGGTTTTGG TAATGGTCCT GGCAATTTAA GTGGACCCCC CAATTTTGGT 2280 2281 GGTGGCCCTC CAGGAATTAC TGGTGGTCTT GGGCATTTAA GTGGACCTCC GGCGTTTGGA 2340 2341 CCTGGACCGG GAAACATACA TATTAGTGGA CCCCCAGGTT TTGGAACAGG GTCTGGGAAG 2400 2401 CCAGGACCAA CTGTCATAAA AGTGCAAAAT ATGCCCTTTA CTGTTTCGGT GGATGAAATT 2460 2461 CTGGATTTCT TTTATGGTTA CCAAGTGATC CCTAGTTCAG TGTGCTTAAA ATACAACGAG 2520 2521 AAAGGCATGC CCACAGGAGA AGCAATGGTT GCATTTGAGT CTCGTGATGA AGCAATGGCA 2580 2581 GCTGTTGTTG ATTTAAATGA CAGGCCTATA GGCTCAAGAA AAGTAAAACT TGTTTTAGGG 2640 2641 TAG 2643 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Meg-0154 | Meleagris gallopavo | 100.0 | 2e-78 | 279 |
| LLPS-Gaga-0731 | Gallus gallus | 100.0 | 1e-78 | 279 |
| LLPS-Fia-3314 | Ficedula albicollis | 98.77 | 2e-77 | 275 |
| LLPS-Tag-1554 | Taeniopygia guttata | 98.77 | 3e-77 | 275 |
| LLPS-Pes-3158 | Pelodiscus sinensis | 96.91 | 2e-75 | 270 |
| LLPS-Sus-2659 | Sus scrofa | 96.3 | 3e-75 | 270 |
| LLPS-Sah-0818 | Sarcophilus harrisii | 96.3 | 2e-75 | 270 |
| LLPS-Aim-0130 | Ailuropoda melanoleuca | 96.3 | 2e-75 | 270 |
| LLPS-Otg-1360 | Otolemur garnettii | 96.3 | 4e-74 | 270 |
| LLPS-Loa-0847 | Loxodonta africana | 96.3 | 8e-76 | 271 |
| LLPS-Mod-1264 | Monodelphis domestica | 96.3 | 3e-75 | 270 |
| LLPS-Cas-2003 | Carlito syrichta | 96.3 | 3e-75 | 270 |
| LLPS-Eqc-2608 | Equus caballus | 96.3 | 2e-75 | 271 |
| LLPS-Caf-1042 | Canis familiaris | 96.3 | 4e-75 | 270 |
| LLPS-Fud-0289 | Fukomys damarensis | 95.68 | 4e-75 | 270 |
| LLPS-Cea-1144 | Cercocebus atys | 95.68 | 4e-74 | 267 |
| LLPS-Maf-2276 | Macaca fascicularis | 95.68 | 5e-74 | 267 |
| LLPS-Mup-2978 | Mustela putorius furo | 95.68 | 6e-75 | 269 |
| LLPS-Ova-0118 | Ovis aries | 95.68 | 2e-73 | 269 |
| LLPS-Myl-2491 | Myotis lucifugus | 95.68 | 2e-74 | 268 |
| LLPS-Mal-3781 | Mandrillus leucophaeus | 95.68 | 4e-74 | 267 |
| LLPS-Paa-1482 | Papio anubis | 95.68 | 4e-74 | 267 |
| LLPS-Bot-0513 | Bos taurus | 95.68 | 1e-74 | 268 |
| LLPS-Tut-2028 | Tursiops truncatus | 95.68 | 5e-75 | 269 |
| LLPS-Rhb-1603 | Rhinopithecus bieti | 95.68 | 4e-74 | 267 |
| LLPS-Man-3186 | Macaca nemestrina | 95.68 | 4e-74 | 267 |
| LLPS-Ict-0368 | Ictidomys tridecemlineatus | 95.68 | 7e-75 | 269 |
| LLPS-Mam-1076 | Macaca mulatta | 95.68 | 3e-74 | 267 |
| LLPS-Poa-3058 | Pongo abelii | 95.68 | 4e-74 | 267 |
| LLPS-Gog-1002 | Gorilla gorilla | 95.06 | 4e-74 | 267 |
| LLPS-Aon-1389 | Aotus nancymaae | 95.06 | 2e-73 | 265 |
| LLPS-Dio-2417 | Dipodomys ordii | 95.06 | 3e-74 | 268 |
| LLPS-Hos-2359 | Homo sapiens | 95.06 | 3e-74 | 267 |
| LLPS-Pat-0251 | Pan troglodytes | 95.06 | 4e-74 | 267 |
| LLPS-Pap-4292 | Pan paniscus | 95.06 | 4e-74 | 267 |
| LLPS-Nol-2331 | Nomascus leucogenys | 95.06 | 4e-74 | 267 |
| LLPS-Gaa-0845 | Gasterosteus aculeatus | 94.62 | 1e-44 | 178 |
| LLPS-Pof-2520 | Poecilia formosa | 94.62 | 6e-46 | 180 |
| LLPS-Anc-2429 | Anolis carolinensis | 94.44 | 6e-74 | 266 |
| LLPS-Mum-2056 | Mus musculus | 93.83 | 3e-73 | 265 |
| LLPS-Mea-1944 | Mesocricetus auratus | 93.83 | 1e-73 | 266 |
| LLPS-Ran-2240 | Rattus norvegicus | 93.21 | 1e-72 | 263 |
| LLPS-Cap-2161 | Cavia porcellus | 93.1 | 1e-42 | 172 |
| LLPS-Xet-2318 | Xenopus tropicalis | 81.48 | 2e-47 | 186 |
| LLPS-Leo-3046 | Lepisosteus oculatus | 79.88 | 4e-59 | 221 |
| LLPS-Dar-1410 | Danio rerio | 75.0 | 1e-54 | 207 |
| LLPS-Orl-2770 | Oryzias latipes | 73.81 | 7e-30 | 130 |
| LLPS-Orn-3278 | Oreochromis niloticus | 73.81 | 3e-30 | 131 |
| LLPS-Chs-3431 | Chlorocebus sabaeus | 72.41 | 3e-31 | 136 |
| LLPS-Fec-3081 | Felis catus | 72.41 | 5e-31 | 135 |
| LLPS-Urm-2504 | Ursus maritimus | 72.41 | 4e-31 | 135 |
| LLPS-Ora-1575 | Ornithorhynchus anatinus | 72.16 | 6e-35 | 147 |
| LLPS-Scf-3864 | Scleropages formosus | 71.43 | 2e-28 | 126 |
| LLPS-Icp-2459 | Ictalurus punctatus | 70.73 | 1e-52 | 202 |
| LLPS-Tar-1572 | Takifugu rubripes | 70.24 | 6e-28 | 124 |
| LLPS-Asm-2140 | Astyanax mexicanus | 69.15 | 8e-31 | 132 |
| LLPS-Orc-3321 | Oryctolagus cuniculus | 68.97 | 8e-30 | 131 |
| LLPS-Xim-4108 | Xiphophorus maculatus | 68.13 | 8e-30 | 130 |
| LLPS-Scm-3528 | Scophthalmus maximus | 67.68 | 2e-30 | 132 |
| LLPS-Cii-2187 | Ciona intestinalis | 62.79 | 2e-25 | 117 |
| LLPS-Ten-2550 | Tetraodon nigroviridis | 60.0 | 4e-19 | 94.4 |
| LLPS-Drm-1919 | Drosophila melanogaster | 57.95 | 2e-24 | 114 |
| LLPS-Cae-1462 | Caenorhabditis elegans | 53.01 | 4e-20 | 100 |
| LLPS-Art-2019 | Arabidopsis thaliana | 39.73 | 9e-06 | 52.4 |
| LLPS-Php-0153 | Physcomitrella patens | 38.36 | 2e-06 | 55.5 |
| LLPS-Met-2574 | Medicago truncatula | 37.84 | 6e-07 | 55.8 |
| LLPS-Prp-0170 | Prunus persica | 37.84 | 3e-06 | 53.9 |
| LLPS-Via-2425 | Vigna angularis | 36.49 | 4e-06 | 53.1 |
| LLPS-Phv-1594 | Phaseolus vulgaris | 36.49 | 5e-06 | 53.1 |
| LLPS-Brn-0294 | Brassica napus | 35.62 | 8e-07 | 55.8 |
| LLPS-Gor-2075 | Gossypium raimondii | 35.23 | 5e-07 | 56.2 |
| LLPS-Glm-2892 | Glycine max | 35.14 | 6e-06 | 52.8 |
| LLPS-Dac-1520 | Daucus carota | 33.66 | 4e-22 | 102 |
| LLPS-Sem-2053 | Selaginella moellendorffii | 33.33 | 8e-07 | 56.6 |
| LLPS-Tra-0456 | Triticum aestivum | 33.17 | 3e-20 | 97.1 |
| LLPS-Hov-0502 | Hordeum vulgare | 33.17 | 2e-21 | 100 |
| LLPS-Tru-1342 | Triticum urartu | 33.17 | 2e-20 | 97.4 |
| LLPS-Orbr-0285 | Oryza brachyantha | 33.0 | 1e-19 | 95.1 |
| LLPS-Orni-1772 | Oryza nivara | 32.51 | 4e-20 | 96.3 |
| LLPS-Orb-0272 | Oryza barthii | 32.51 | 2e-20 | 97.8 |
| LLPS-Orgl-0517 | Oryza glumaepatula | 32.51 | 2e-20 | 97.4 |
| LLPS-Org-0338 | Oryza glaberrima | 32.51 | 2e-20 | 97.4 |
| LLPS-Nia-1085 | Nicotiana attenuata | 32.18 | 2e-19 | 94.4 |
| LLPS-Brd-0281 | Brachypodium distachyon | 32.02 | 6e-19 | 93.2 |
| LLPS-Lep-2369 | Leersia perrieri | 32.02 | 2e-19 | 94.7 |
| LLPS-Pot-2033 | Populus trichocarpa | 32.0 | 2e-06 | 54.3 |
| LLPS-Coc-1058 | Corchorus capsularis | 31.93 | 4e-26 | 114 |
| LLPS-Thc-1868 | Theobroma cacao | 31.84 | 9e-20 | 96.3 |
| LLPS-Cus-1981 | Cucumis sativus | 31.53 | 6e-21 | 99.0 |
| LLPS-Mae-1059 | Manihot esculenta | 31.53 | 8e-21 | 99.0 |
| LLPS-Ori-2415 | Oryza indica | 31.03 | 6e-21 | 99.0 |
| LLPS-Ors-0047 | Oryza sativa | 31.03 | 4e-19 | 93.6 |
| LLPS-Orr-1414 | Oryza rufipogon | 30.54 | 6e-18 | 90.1 |
| LLPS-Vir-1605 | Vigna radiata | 30.52 | 7e-22 | 101 |
| LLPS-Sei-2361 | Setaria italica | 30.14 | 9e-19 | 92.4 |
| LLPS-Sot-1432 | Solanum tuberosum | 30.14 | 8e-19 | 92.4 |
| LLPS-Zem-1176 | Zea mays | 30.14 | 1e-17 | 89.4 |
| LLPS-Viv-1441 | Vitis vinifera | 30.05 | 9e-20 | 95.1 |
| LLPS-Sol-2172 | Solanum lycopersicum | 29.7 | 4e-18 | 90.1 |
| LLPS-Sob-0834 | Sorghum bicolor | 29.19 | 1e-17 | 92.0 |
| LLPS-Bro-1645 | Brassica oleracea | 28.99 | 1e-20 | 97.8 |
| LLPS-Brr-0770 | Brassica rapa | 28.05 | 2e-13 | 78.6 |
| LLPS-Arl-1749 | Arabidopsis lyrata | 27.32 | 3e-13 | 74.7 |
| LLPS-Hea-0422 | Helianthus annuus | 27.0 | 7e-19 | 92.4 |
| LLPS-Caj-4299 | Callithrix jacchus | 25.74 | 2e-12 | 75.1 |
| LLPS-Gas-1331 | Galdieria sulphuraria | 24.32 | 6e-17 | 90.1 |