LLPS-Amt-1099
AMTR_s00058p00176500
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | T-complex protein 1 subunit gamma |
Gene Name: | AMTR_s00058p00176500 |
Ensembl Gene: | AMTR_s00058p00176500 |
Ensembl Protein: | ERN06639 |
Organism: | Amborella trichopoda |
Taxa ID: | 13333 |
LLPS Type: | LLPS regulator |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Cajal body, Nucleolus, Stress granule, Others | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ERN06639 | ERN06639 |
UniProt | W1PG16, W1PG16_AMBTC | |
GeneBank | KI393888 | ERN06639.1 |
RefSeq | XM_006844901.2 | XP_006844964.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MHAPVLVLKD SLKRESGTKV HHANIQASKA VADIIRTTLG PRSMLKMLLD AAGGIVVTND 60 61 GNCILRELDL AHPAAKSMIE LSRTQDEEVG DGTTSVIVLA GEMLHVAEAF IDKSYHPTVI 120 121 CRAYSKALED SIAVLDKIAV PIDVNDRATM LKLVKSCIGT KFTGQFGDLI ADLAIGATTT 180 181 IGVDLGQGIK EVDIKKYIKV EKIPGGQLED SKVLKGVMIN KDVVSPGKMK RKILNPRIIL 240 241 LDCPLEYKKG ENQTNAELLK EEDWSVLLKM EEEYIESLCA QILKFQPDLV ITEKGLSDLA 300 301 CHYLSKAGVS AIRRLRKTDN NRIAKACGAV VVNRPDELQE SDVGTGAGLF EVKKIGDEFF 360 361 AFITNCKDPK ACTVLVRGAS KDLLNEVERN LQDAMSVARN IIKNPKLVPG GGASELTVSA 420 421 TLKQKSSSIE GIEKWPYEAV AVAFEAIPRT LAQNCGVNVI RTMTALQGKH ANGENAWIGI 480 481 DGNTGTIVDM KEKGIWDAYN VKAQTFKTAI EAACMLLRID DIVSGIKKKQ SGGAGSAPKQ 540 541 PQVDQEDDAD GEQILPE 557 |
Nucleotide CDS Sequence (FASTA) |
1 ATGCACGCAC CAGTACTTGT TCTCAAAGAT TCTTTGAAAC GAGAGTCTGG AACTAAAGTT 60 61 CACCATGCAA ACATCCAGGC ATCTAAGGCA GTGGCTGATA TCATCCGAAC AACTTTGGGT 120 121 CCTCGATCCA TGTTGAAGAT GCTACTAGAT GCTGCAGGAG GAATTGTTGT AACGAATGAC 180 181 GGAAATTGTA TTCTGCGAGA ACTAGATTTG GCCCACCCAG CTGCTAAGTC TATGATTGAA 240 241 CTTAGTCGCA CACAAGATGA AGAAGTAGGG GATGGGACTA CGTCAGTGAT TGTTCTTGCT 300 301 GGTGAGATGC TTCATGTGGC AGAAGCTTTT ATTGACAAGA GCTATCATCC TACAGTCATT 360 361 TGCCGAGCCT ACAGTAAGGC CCTTGAGGAT TCTATTGCAG TGCTTGATAA GATCGCTGTG 420 421 CCCATTGATG TAAATGACCG AGCGACAATG CTGAAACTAG TCAAAAGTTG CATCGGCACA 480 481 AAATTCACTG GCCAATTTGG AGACCTCATT GCTGACTTAG CCATTGGTGC TACTACAACT 540 541 ATTGGTGTGG ATCTCGGCCA AGGCATAAAA GAAGTCGACA TTAAAAAGTA CATAAAAGTT 600 601 GAAAAGATTC CTGGTGGTCA GTTGGAAGAC TCAAAAGTTC TTAAGGGAGT TATGATAAAC 660 661 AAAGATGTGG TTTCTCCAGG CAAAATGAAA AGAAAGATAC TAAACCCTCG CATCATTCTT 720 721 CTGGATTGCC CTCTTGAATA CAAGAAAGGG GAAAATCAAA CAAATGCAGA GTTGTTGAAA 780 781 GAAGAAGACT GGAGTGTCCT GCTGAAGATG GAAGAAGAGT ATATCGAGAG TCTCTGTGCT 840 841 CAGATATTGA AGTTCCAGCC TGACCTAGTT ATCACAGAGA AAGGGCTCAG CGATCTTGCG 900 901 TGCCACTATC TCAGCAAGGC TGGTGTTAGT GCCATAAGGA GGCTAAGGAA GACTGACAAT 960 961 AACAGGATTG CCAAAGCTTG TGGAGCCGTG GTTGTAAATC GGCCAGATGA GCTACAAGAG 1020 1021 TCAGATGTTG GAACAGGAGC TGGGCTTTTC GAGGTCAAGA AGATTGGGGA CGAATTCTTC 1080 1081 GCCTTCATCA CTAATTGCAA AGACCCAAAG GCTTGCACTG TTCTTGTAAG AGGTGCTAGC 1140 1141 AAGGACCTTT TAAATGAAGT TGAAAGGAAT TTACAGGATG CCATGTCTGT AGCACGAAAT 1200 1201 ATAATAAAGA ACCCAAAGCT TGTTCCTGGT GGTGGGGCTT CTGAGCTAAC TGTGTCTGCA 1260 1261 ACCTTGAAGC AGAAGAGTTC GTCCATCGAA GGGATTGAAA AGTGGCCATA TGAAGCTGTT 1320 1321 GCAGTTGCTT TCGAGGCTAT CCCCCGTACT CTGGCACAAA ACTGTGGAGT AAATGTAATC 1380 1381 CGGACGATGA CAGCTTTGCA AGGAAAGCAT GCAAATGGTG AAAATGCATG GATTGGCATA 1440 1441 GACGGAAACA CAGGCACTAT CGTGGATATG AAAGAAAAAG GGATTTGGGA TGCATATAAT 1500 1501 GTGAAGGCTC AGACATTTAA GACCGCCATT GAGGCAGCTT GCATGCTCTT GAGAATAGAT 1560 1561 GATATTGTTA GTGGTATAAA GAAGAAACAA AGTGGAGGGG CAGGATCAGC TCCTAAGCAG 1620 1621 CCTCAAGTTG ACCAAGAAGA TGATGCAGAT GGTGAACAGA TTCTTCCTGA ATAA 1674 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Thc-0969 | Theobroma cacao | 91.38 | 0.0 | 1030 |
LLPS-Gor-0338 | Gossypium raimondii | 91.2 | 0.0 | 1050 |
LLPS-Coc-0581 | Corchorus capsularis | 90.48 | 0.0 | 1025 |
LLPS-Mae-0578 | Manihot esculenta | 90.48 | 0.0 | 1030 |
LLPS-Viv-0720 | Vitis vinifera | 90.48 | 0.0 | 1043 |
LLPS-Mua-0511 | Musa acuminata | 90.13 | 0.0 | 1043 |
LLPS-Prp-1158 | Prunus persica | 89.41 | 0.0 | 1009 |
LLPS-Dac-0168 | Daucus carota | 89.05 | 0.0 | 1027 |
LLPS-Bro-1302 | Brassica oleracea | 88.87 | 0.0 | 1007 |
LLPS-Brr-0520 | Brassica rapa | 88.87 | 0.0 | 1007 |
LLPS-Hea-1242 | Helianthus annuus | 88.87 | 0.0 | 1025 |
LLPS-Brn-1224 | Brassica napus | 88.87 | 0.0 | 1007 |
LLPS-Pot-1948 | Populus trichocarpa | 88.69 | 0.0 | 1007 |
LLPS-Org-1476 | Oryza glaberrima | 88.33 | 0.0 | 1033 |
LLPS-Orbr-0471 | Oryza brachyantha | 88.33 | 0.0 | 1031 |
LLPS-Lep-0800 | Leersia perrieri | 87.97 | 0.0 | 1008 |
LLPS-Nia-0377 | Nicotiana attenuata | 87.61 | 0.0 | 1014 |
LLPS-Met-0703 | Medicago truncatula | 87.61 | 0.0 | 1019 |
LLPS-Sob-0421 | Sorghum bicolor | 87.43 | 0.0 | 1018 |
LLPS-Orp-0240 | Oryza punctata | 87.43 | 0.0 | 1020 |
LLPS-Glm-1113 | Glycine max | 87.43 | 0.0 | 1002 |
LLPS-Orr-1562 | Oryza rufipogon | 87.25 | 0.0 | 1019 |
LLPS-Orgl-0866 | Oryza glumaepatula | 87.25 | 0.0 | 1019 |
LLPS-Vir-1462 | Vigna radiata | 87.16 | 0.0 | 909 |
LLPS-Ors-1727 | Oryza sativa | 87.07 | 0.0 | 1015 |
LLPS-Arl-0391 | Arabidopsis lyrata | 87.07 | 0.0 | 994 |
LLPS-Brd-0639 | Brachypodium distachyon | 87.07 | 0.0 | 1017 |
LLPS-Orni-0972 | Oryza nivara | 87.07 | 0.0 | 1015 |
LLPS-Ori-1821 | Oryza indica | 87.07 | 0.0 | 1015 |
LLPS-Zem-1536 | Zea mays | 86.89 | 0.0 | 1010 |
LLPS-Art-0441 | Arabidopsis thaliana | 86.89 | 0.0 | 993 |
LLPS-Sei-0295 | Setaria italica | 86.89 | 0.0 | 1015 |
LLPS-Sot-0054 | Solanum tuberosum | 86.71 | 0.0 | 986 |
LLPS-Via-1341 | Vigna angularis | 86.71 | 0.0 | 981 |
LLPS-Orm-0683 | Oryza meridionalis | 86.61 | 0.0 | 1010 |
LLPS-Orb-1249 | Oryza barthii | 86.58 | 0.0 | 933 |
LLPS-Sol-0805 | Solanum lycopersicum | 86.54 | 0.0 | 990 |
LLPS-Phv-1022 | Phaseolus vulgaris | 86.36 | 0.0 | 997 |
LLPS-Tru-0877 | Triticum urartu | 86.18 | 0.0 | 1004 |
LLPS-Cus-0497 | Cucumis sativus | 86.18 | 0.0 | 988 |
LLPS-Tra-0889 | Triticum aestivum | 86.18 | 0.0 | 1004 |
LLPS-Hov-1752 | Hordeum vulgare | 85.82 | 0.0 | 1001 |
LLPS-Php-1700 | Physcomitrella patens | 78.64 | 0.0 | 922 |
LLPS-Sem-1059 | Selaginella moellendorffii | 75.94 | 0.0 | 911 |
LLPS-Chr-0065 | Chlamydomonas reinhardtii | 67.5 | 0.0 | 765 |
LLPS-Osl-0119 | Ostreococcus lucimarinus | 64.92 | 0.0 | 739 |
LLPS-Xet-0523 | Xenopus tropicalis | 63.72 | 2e-100 | 310 |
LLPS-Anp-1190 | Anas platyrhynchos | 63.48 | 0.0 | 692 |
LLPS-Meg-1483 | Meleagris gallopavo | 63.46 | 0.0 | 689 |
LLPS-Gaga-2746 | Gallus gallus | 63.38 | 0.0 | 698 |
LLPS-Mum-3510 | Mus musculus | 62.88 | 0.0 | 696 |
LLPS-Eqc-2409 | Equus caballus | 62.69 | 0.0 | 694 |
LLPS-Fia-1540 | Ficedula albicollis | 62.69 | 0.0 | 620 |
LLPS-Ran-1741 | Rattus norvegicus | 62.69 | 0.0 | 695 |
LLPS-Ora-0113 | Ornithorhynchus anatinus | 62.42 | 0.0 | 600 |
LLPS-Tag-1207 | Taeniopygia guttata | 62.32 | 0.0 | 700 |
LLPS-Myl-1674 | Myotis lucifugus | 62.31 | 0.0 | 687 |
LLPS-Orc-0897 | Oryctolagus cuniculus | 62.13 | 0.0 | 700 |
LLPS-Anc-2128 | Anolis carolinensis | 62.06 | 0.0 | 699 |
LLPS-Sah-2309 | Sarcophilus harrisii | 62.01 | 0.0 | 691 |
LLPS-Fec-0375 | Felis catus | 61.97 | 0.0 | 693 |
LLPS-Drm-0789 | Drosophila melanogaster | 61.88 | 0.0 | 669 |
LLPS-Mam-0514 | Macaca mulatta | 61.76 | 0.0 | 698 |
LLPS-Man-1505 | Macaca nemestrina | 61.76 | 0.0 | 699 |
LLPS-Paa-2624 | Papio anubis | 61.76 | 0.0 | 698 |
LLPS-Mal-0500 | Mandrillus leucophaeus | 61.76 | 0.0 | 698 |
LLPS-Cea-0405 | Cercocebus atys | 61.76 | 0.0 | 698 |
LLPS-Maf-0020 | Macaca fascicularis | 61.76 | 0.0 | 698 |
LLPS-Chs-1289 | Chlorocebus sabaeus | 61.76 | 0.0 | 698 |
LLPS-Pof-1760 | Poecilia formosa | 61.75 | 0.0 | 687 |
LLPS-Xim-2834 | Xiphophorus maculatus | 61.75 | 0.0 | 685 |
LLPS-Scf-0641 | Scleropages formosus | 61.69 | 0.0 | 699 |
LLPS-Cap-0557 | Cavia porcellus | 61.65 | 0.0 | 694 |
LLPS-Otg-1921 | Otolemur garnettii | 61.65 | 0.0 | 693 |
LLPS-Mea-2091 | Mesocricetus auratus | 61.65 | 5e-118 | 357 |
LLPS-Cii-0992 | Ciona intestinalis | 61.63 | 0.0 | 678 |
LLPS-Ict-2365 | Ictidomys tridecemlineatus | 61.58 | 0.0 | 697 |
LLPS-Loa-1394 | Loxodonta africana | 61.58 | 0.0 | 697 |
LLPS-Ova-1106 | Ovis aries | 61.58 | 0.0 | 697 |
LLPS-Bot-1029 | Bos taurus | 61.58 | 0.0 | 698 |
LLPS-Caj-0805 | Callithrix jacchus | 61.58 | 0.0 | 695 |
LLPS-Aon-1359 | Aotus nancymaae | 61.58 | 0.0 | 695 |
LLPS-Orn-1178 | Oreochromis niloticus | 61.57 | 0.0 | 686 |
LLPS-Dio-0718 | Dipodomys ordii | 61.43 | 8e-129 | 387 |
LLPS-Sus-0141 | Sus scrofa | 61.4 | 0.0 | 696 |
LLPS-Asm-1876 | Astyanax mexicanus | 61.25 | 0.0 | 696 |
LLPS-Hos-1640 | Homo sapiens | 61.21 | 0.0 | 694 |
LLPS-Pap-0338 | Pan paniscus | 61.21 | 0.0 | 694 |
LLPS-Pat-1150 | Pan troglodytes | 61.21 | 0.0 | 694 |
LLPS-Nec-0564 | Neurospora crassa | 61.17 | 0.0 | 687 |
LLPS-Urm-2126 | Ursus maritimus | 61.03 | 0.0 | 694 |
LLPS-Gog-0211 | Gorilla gorilla | 61.03 | 0.0 | 693 |
LLPS-Leo-1884 | Lepisosteus oculatus | 61.0 | 0.0 | 682 |
LLPS-Caf-0556 | Canis familiaris | 60.95 | 0.0 | 694 |
LLPS-Fud-1155 | Fukomys damarensis | 60.95 | 0.0 | 685 |
LLPS-Icp-1470 | Ictalurus punctatus | 60.94 | 0.0 | 673 |
LLPS-Aim-0290 | Ailuropoda melanoleuca | 60.85 | 0.0 | 690 |
LLPS-Scm-0586 | Scophthalmus maximus | 60.82 | 0.0 | 676 |
LLPS-Mod-3265 | Monodelphis domestica | 60.8 | 0.0 | 685 |
LLPS-Dar-2506 | Danio rerio | 60.78 | 0.0 | 687 |
LLPS-Chc-0604 | Chondrus crispus | 60.77 | 0.0 | 681 |
LLPS-Tut-1813 | Tursiops truncatus | 60.66 | 0.0 | 688 |
LLPS-Pes-0470 | Pelodiscus sinensis | 60.55 | 0.0 | 682 |
LLPS-Tum-1110 | Tuber melanosporum | 60.42 | 0.0 | 667 |
LLPS-Cis-0265 | Ciona savignyi | 60.19 | 0.0 | 679 |
LLPS-Gaa-0185 | Gasterosteus aculeatus | 60.15 | 0.0 | 679 |
LLPS-Rhb-0423 | Rhinopithecus bieti | 60.11 | 0.0 | 669 |
LLPS-Tar-1210 | Takifugu rubripes | 60.0 | 0.0 | 667 |
LLPS-Abg-1900 | Absidia glauca | 59.93 | 0.0 | 684 |
LLPS-Coo-1431 | Colletotrichum orbiculare | 59.85 | 0.0 | 680 |
LLPS-Nol-0284 | Nomascus leucogenys | 59.81 | 0.0 | 664 |
LLPS-Poa-1273 | Pongo abelii | 59.79 | 3e-121 | 366 |
LLPS-Cogr-0835 | Colletotrichum graminicola | 59.66 | 0.0 | 677 |
LLPS-Nef-1343 | Neosartorya fischeri | 59.63 | 0.0 | 683 |
LLPS-Kop-0356 | Komagataella pastoris | 59.54 | 0.0 | 660 |
LLPS-Ten-2538 | Tetraodon nigroviridis | 59.48 | 0.0 | 656 |
LLPS-Blg-0165 | Blumeria graminis | 59.43 | 0.0 | 661 |
LLPS-Asn-0237 | Aspergillus nidulans | 59.36 | 0.0 | 682 |
LLPS-Ved-0703 | Verticillium dahliae | 59.28 | 0.0 | 669 |
LLPS-Cas-0153 | Carlito syrichta | 59.26 | 9e-172 | 499 |
LLPS-Asfu-0450 | Aspergillus fumigatus | 59.25 | 0.0 | 679 |
LLPS-Trr-0768 | Trichoderma reesei | 59.14 | 0.0 | 673 |
LLPS-Fuo-1161 | Fusarium oxysporum | 59.13 | 0.0 | 670 |
LLPS-Fuv-0940 | Fusarium verticillioides | 59.13 | 0.0 | 670 |
LLPS-Cog-0960 | Colletotrichum gloeosporioides | 59.08 | 0.0 | 667 |
LLPS-Mao-0127 | Magnaporthe oryzae | 59.03 | 0.0 | 674 |
LLPS-Mup-1260 | Mustela putorius furo | 59.0 | 9e-139 | 413 |
LLPS-Asc-0741 | Aspergillus clavatus | 58.99 | 0.0 | 677 |
LLPS-Scs-0178 | Sclerotinia sclerotiorum | 58.96 | 0.0 | 668 |
LLPS-Map-1051 | Magnaporthe poae | 58.95 | 0.0 | 669 |
LLPS-Lac-2609 | Latimeria chalumnae | 58.81 | 0.0 | 644 |
LLPS-Fus-0237 | Fusarium solani | 58.77 | 0.0 | 675 |
LLPS-Trv-0320 | Trichoderma virens | 58.76 | 0.0 | 668 |
LLPS-Gas-0083 | Galdieria sulphuraria | 58.61 | 0.0 | 675 |
LLPS-Scp-0631 | Schizosaccharomyces pombe | 58.52 | 0.0 | 674 |
LLPS-Asf-0074 | Aspergillus flavus | 58.43 | 0.0 | 675 |
LLPS-Aso-0198 | Aspergillus oryzae | 58.43 | 0.0 | 675 |
LLPS-Gag-0051 | Gaeumannomyces graminis | 58.38 | 0.0 | 663 |
LLPS-Beb-0147 | Beauveria bassiana | 58.22 | 0.0 | 663 |
LLPS-Phn-0450 | Phaeosphaeria nodorum | 58.14 | 0.0 | 643 |
LLPS-Miv-0319 | Microbotryum violaceum | 58.1 | 0.0 | 655 |
LLPS-Scc-0274 | Schizosaccharomyces cryophilus | 58.03 | 0.0 | 669 |
LLPS-Asni-0447 | Aspergillus niger | 58.0 | 0.0 | 671 |
LLPS-Scj-0420 | Schizosaccharomyces japonicus | 57.84 | 0.0 | 660 |
LLPS-Yal-0253 | Yarrowia lipolytica | 57.83 | 0.0 | 637 |
LLPS-Orl-0464 | Oryzias latipes | 57.8 | 0.0 | 643 |
LLPS-Sac-0468 | Saccharomyces cerevisiae | 57.46 | 0.0 | 647 |
LLPS-Zyt-0330 | Zymoseptoria tritici | 57.25 | 0.0 | 644 |
LLPS-Dos-0947 | Dothistroma septosporum | 57.17 | 0.0 | 645 |
LLPS-Pytr-0873 | Pyrenophora triticirepentis | 57.09 | 0.0 | 645 |
LLPS-Pyt-0381 | Pyrenophora teres | 56.91 | 0.0 | 641 |
LLPS-Crn-1236 | Cryptococcus neoformans | 56.82 | 0.0 | 647 |
LLPS-Mel-0689 | Melampsora laricipopulina | 56.53 | 0.0 | 643 |
LLPS-Pug-0636 | Puccinia graminis | 56.48 | 0.0 | 648 |
LLPS-Usm-1097 | Ustilago maydis | 56.35 | 0.0 | 643 |
LLPS-Ast-0428 | Aspergillus terreus | 56.34 | 0.0 | 633 |
LLPS-Put-0089 | Puccinia triticina | 56.12 | 0.0 | 644 |
LLPS-Lem-0044 | Leptosphaeria maculans | 55.9 | 0.0 | 630 |
LLPS-Asg-0486 | Ashbya gossypii | 55.49 | 0.0 | 635 |
LLPS-Cae-0302 | Caenorhabditis elegans | 54.97 | 0.0 | 610 |
LLPS-Spr-0772 | Sporisorium reilianum | 54.56 | 0.0 | 633 |
LLPS-Cym-0251 | Cyanidioschyzon merolae | 51.76 | 0.0 | 579 |