LLPS-Aim-1998
TRUB2
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | TruB pseudouridine synthase family member 2 |
Gene Name: | TRUB2 |
Ensembl Gene: | ENSAMEG00000015395.1 |
Ensembl Protein: | ENSAMEP00000016248.1 |
Organism: | Ailuropoda melanoleuca |
Taxa ID: | 9646 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Mitochondrial RNA granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSAMET00000016922.1 | ENSAMEP00000016248.1 |
UniProt | G1MA74, G1MA74_AILME | |
GeneBank | ACTA01057200 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MGSRGLARLH GLFAVYKPPG LKWKHLRDTV ELQLLKGVNA GRAPAPEQRV RFLLGPVGDG 60 61 EEKALTLTAT SVPTLTNHPL VCGPAFTRLK IGVGHRLDAQ ASGVLVLGVG HGRRLLTSMY 120 121 NAHLTKDYTV RGLLGKATDD FCEDGRLVEK STYDHVTREK LDRILALIQG SHQKALVMYS 180 181 NVDLQTQEAY DMAVRGLIRP MGKSPMLVTG IRCVSFAPPE FLLEVQCMHE TQKQLRRLVH 240 241 EIGLELKTTA VCSQVRRTRD GFFTLDDALL RTQWDLHNIQ DAIQAAAPRV AAELEKSLRP 300 301 GLGIQKLPGP SRPWDSWGPS SASGLESCAG S 331 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGGGTCCC GCGGCCTGGC GCGGCTGCAT GGGCTCTTCG CGGTCTACAA GCCCCCGGGG 60 61 CTAAAATGGA AGCACCTGCG GGACACCGTG GAGTTGCAGC TTCTGAAGGG TGTCAATGCT 120 121 GGGAGGGCTC CTGCCCCCGA ACAGCGTGTT CGTTTCCTGC TGGGCCCCGT GGGAGACGGT 180 181 GAAGAGAAGG CGCTTACTCT CACCGCCACG AGTGTGCCCA CCCTCACCAA CCATCCGCTG 240 241 GTCTGCGGAC CAGCATTCAC CAGGCTGAAG ATTGGTGTGG GACACCGGCT GGATGCCCAA 300 301 GCATCTGGGG TGCTTGTGCT CGGCGTGGGA CACGGACGCA GGCTCCTTAC CAGCATGTAC 360 361 AACGCTCACC TCACCAAGGA TTACACAGTA CGTGGCCTCC TGGGCAAAGC CACAGATGAC 420 421 TTCTGTGAGG ATGGGCGGCT GGTGGAGAAG TCAACATATG ACCATGTGAC CAGAGAGAAG 480 481 CTGGACCGAA TCCTGGCCCT GATCCAAGGT TCCCATCAGA AGGCCCTGGT GATGTACTCC 540 541 AACGTGGACT TGCAAACCCA GGAGGCCTAC GATATGGCTG TGAGAGGCTT GATTCGGCCC 600 601 ATGGGCAAGT CCCCGATGCT GGTAACAGGC ATCCGATGTG TCTCCTTCGC GCCTCCGGAA 660 661 TTCCTCTTAG AGGTGCAGTG CATGCACGAG ACGCAGAAGC AGCTGCGAAG GCTGGTGCAT 720 721 GAGATCGGCC TGGAGCTGAA GACCACTGCT GTCTGCTCCC AAGTGCGGCG TACCCGGGAT 780 781 GGCTTTTTCA CCCTAGACGA TGCCCTCCTG AGGACCCAGT GGGACTTACA CAACATCCAG 840 841 GATGCCATCC AGGCCGCAGC TCCCCGGGTG GCCGCGGAGC TGGAGAAGAG CTTGAGGCCA 900 901 GGGCTGGGCA TCCAGAAGCT TCCTGGTCCC AGCAGACCCT GGGACTCCTG GGGGCCGAGC 960 961 TCTGCCTCGG GGCTGGAGAG CTGTGCGGGG TCA 993 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Urm-1002 | Ursus maritimus | 95.77 | 0.0 | 612 |
LLPS-Caf-0181 | Canis familiaris | 93.69 | 0.0 | 548 |
LLPS-Mup-4184 | Mustela putorius furo | 91.52 | 0.0 | 590 |
LLPS-Eqc-2086 | Equus caballus | 88.79 | 0.0 | 568 |
LLPS-Loa-3026 | Loxodonta africana | 88.12 | 0.0 | 517 |
LLPS-Fec-3416 | Felis catus | 87.35 | 0.0 | 553 |
LLPS-Sus-0334 | Sus scrofa | 86.67 | 0.0 | 555 |
LLPS-Cas-3991 | Carlito syrichta | 86.24 | 0.0 | 548 |
LLPS-Ere-0677 | Erinaceus europaeus | 85.67 | 0.0 | 527 |
LLPS-Myl-0607 | Myotis lucifugus | 85.4 | 0.0 | 529 |
LLPS-Bot-4537 | Bos taurus | 85.31 | 2e-102 | 307 |
LLPS-Pap-0420 | Pan paniscus | 84.85 | 0.0 | 544 |
LLPS-Gog-3363 | Gorilla gorilla | 84.85 | 0.0 | 543 |
LLPS-Pat-2102 | Pan troglodytes | 84.55 | 0.0 | 541 |
LLPS-Cea-0118 | Cercocebus atys | 84.55 | 0.0 | 546 |
LLPS-Caj-4842 | Callithrix jacchus | 84.5 | 0.0 | 542 |
LLPS-Nol-2069 | Nomascus leucogenys | 84.24 | 0.0 | 540 |
LLPS-Hos-0946 | Homo sapiens | 84.24 | 0.0 | 541 |
LLPS-Mal-3600 | Mandrillus leucophaeus | 84.24 | 0.0 | 541 |
LLPS-Paa-3886 | Papio anubis | 84.24 | 0.0 | 541 |
LLPS-Orc-2921 | Oryctolagus cuniculus | 84.05 | 0.0 | 533 |
LLPS-Mam-2213 | Macaca mulatta | 83.33 | 0.0 | 535 |
LLPS-Ova-3217 | Ovis aries | 83.33 | 0.0 | 527 |
LLPS-Maf-2803 | Macaca fascicularis | 83.33 | 0.0 | 535 |
LLPS-Otg-4082 | Otolemur garnettii | 82.69 | 3e-76 | 238 |
LLPS-Aon-2668 | Aotus nancymaae | 82.19 | 0.0 | 517 |
LLPS-Dio-3231 | Dipodomys ordii | 81.87 | 0.0 | 524 |
LLPS-Ict-1529 | Ictidomys tridecemlineatus | 81.52 | 0.0 | 518 |
LLPS-Cap-2491 | Cavia porcellus | 80.3 | 0.0 | 511 |
LLPS-Mea-4518 | Mesocricetus auratus | 80.3 | 0.0 | 515 |
LLPS-Man-4785 | Macaca nemestrina | 80.27 | 2e-162 | 464 |
LLPS-Chs-0485 | Chlorocebus sabaeus | 80.06 | 7e-178 | 503 |
LLPS-Mum-4015 | Mus musculus | 80.0 | 0.0 | 518 |
LLPS-Ran-2329 | Rattus norvegicus | 79.81 | 7e-172 | 488 |
LLPS-Fud-3811 | Fukomys damarensis | 78.79 | 1e-176 | 500 |
LLPS-Rhb-0041 | Rhinopithecus bieti | 76.36 | 3e-166 | 473 |
LLPS-Mod-3807 | Monodelphis domestica | 72.95 | 5e-151 | 434 |
LLPS-Meg-1686 | Meleagris gallopavo | 65.38 | 3e-87 | 268 |
LLPS-Lac-3229 | Latimeria chalumnae | 63.99 | 5e-123 | 364 |
LLPS-Tag-1547 | Taeniopygia guttata | 63.98 | 9e-109 | 325 |
LLPS-Anc-2804 | Anolis carolinensis | 63.39 | 4e-123 | 364 |
LLPS-Fia-2843 | Ficedula albicollis | 62.55 | 1e-103 | 313 |
LLPS-Gaga-0397 | Gallus gallus | 60.96 | 8e-113 | 340 |
LLPS-Pes-3352 | Pelodiscus sinensis | 59.66 | 6e-108 | 324 |
LLPS-Leo-3604 | Lepisosteus oculatus | 58.92 | 1e-109 | 328 |
LLPS-Xet-3560 | Xenopus tropicalis | 57.55 | 2e-116 | 347 |
LLPS-Scm-0726 | Scophthalmus maximus | 57.45 | 6e-106 | 320 |
LLPS-Scf-3055 | Scleropages formosus | 56.83 | 1e-103 | 313 |
LLPS-Xim-1716 | Xiphophorus maculatus | 56.69 | 2e-101 | 308 |
LLPS-Pof-3124 | Poecilia formosa | 56.43 | 7e-100 | 306 |
LLPS-Gaa-3462 | Gasterosteus aculeatus | 56.34 | 5e-103 | 313 |
LLPS-Asm-3201 | Astyanax mexicanus | 56.34 | 4e-106 | 321 |
LLPS-Ten-0679 | Tetraodon nigroviridis | 55.48 | 4e-100 | 304 |
LLPS-Icp-4062 | Ictalurus punctatus | 54.88 | 4e-102 | 318 |
LLPS-Orl-0069 | Oryzias latipes | 53.56 | 3e-96 | 295 |
LLPS-Dar-3590 | Danio rerio | 53.55 | 9e-100 | 305 |
LLPS-Orn-1603 | Oreochromis niloticus | 53.19 | 7e-100 | 305 |
LLPS-Tar-1979 | Takifugu rubripes | 52.48 | 6e-96 | 295 |
LLPS-Drm-0328 | Drosophila melanogaster | 36.03 | 9e-40 | 148 |
LLPS-Cis-1627 | Ciona savignyi | 35.12 | 2e-44 | 160 |
LLPS-Tut-2265 | Tursiops truncatus | 32.22 | 5e-11 | 66.2 |
LLPS-Cae-1337 | Caenorhabditis elegans | 25.36 | 8e-15 | 77.8 |