LLPS-Aim-0329
NXF1
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Nuclear RNA export factor 1 |
Gene Name: | NXF1 |
Ensembl Gene: | ENSAMEG00000006237.1 |
Ensembl Protein: | ENSAMEP00000006674.1 |
Organism: | Ailuropoda melanoleuca |
Taxa ID: | 9646 |
LLPS Type: | Client |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nuclear speckle, Stress granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSAMET00000006955.1 | ENSAMEP00000006674.1 |
UniProt | G1LIC3, G1LIC3_AILME | |
GeneBank | ACTA01017884, ACTA01033884, ACTA01025884 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MADEGKSYNE HDDRVSFPQR RKKGRGPFRW KYGEGNRRSG RGGSGIRSSR LEEDDRDVAM 60 61 SDAQDVPRIR HNPYPSRPNR RGDSWHDRDR IHVTVRRDRT LPDRGGAGTS QDGTSRNWFK 120 121 ITIPYGRKYD KSWLLSVIQS KCNVPFTPIE FHYENTRAQF FVEDASTASA LKAVNYKILD 180 181 QENRRISIII NSSAPPHSVQ NELKPEQVEQ LKLIMSKRYD GSQQALDLKG LRSDPDLVAQ 240 241 NIDVVLNRRS CMAATLRIIE ENIPELLSLN LSNNRLYRLD DMSSLVQKAP NLKILNLSGN 300 301 ELKSERELDK VKGLKLEELW LDGNPLCDTF RDQSTYISAI RERFPKLLRL DGHELPPPIA 360 361 FDVEAPTMLP PCKGSYFGTE TLKNLVLHFL QQYYAVYDSG DRQRLLAAHG DGQRLLDAYH 420 421 DGACCSLSIP FTPQNPARSN LAEYFKDSRN VKKLKDPTLR FRLLKHTRLN VVAFLNELPK 480 481 TQHDINSFVV DISAQTSTLL CFSVNGVFKE VDGKSRDSLR AFTRTFVAVP ASNSGLCIVN 540 541 DELFVRNASA DEIQRAFAMP APTPSSSPVP TLSPEQQEML QAFSTQSGMN LEWSQKCLQD 600 601 NNWDYTRSAQ AFTHLKAKGE IPEVAFMK 628 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGCGGACG AGGGGAAGTC CTACAACGAG CACGATGACC GCGTTAGTTT CCCTCAAAGA 60 61 AGAAAGAAAG GCCGGGGTCC TTTCCGGTGG AAGTATGGTG AGGGGAACCG TAGGTCTGGA 120 121 AGAGGAGGTT CTGGCATTCG GTCTTCCCGC TTGGAGGAAG ATGACAGAGA TGTGGCAATG 180 181 AGTGATGCCC AGGATGTTCC CCGAATACGA CATAACCCCT ATCCTTCCCG ACCCAACCGT 240 241 CGAGGTGACA GTTGGCACGA TCGAGATCGC ATTCATGTTA CTGTGCGGAG AGACAGAACT 300 301 CTTCCAGACA GAGGAGGGGC TGGCACCAGC CAGGATGGGA CCTCCAGGAA CTGGTTTAAG 360 361 ATCACAATTC CCTATGGCAG AAAATATGAC AAGTCATGGC TCCTGAGTGT GATTCAGAGC 420 421 AAGTGCAACG TCCCTTTCAC CCCCATTGAG TTTCACTATG AAAACACACG GGCCCAGTTT 480 481 TTTGTTGAGG ATGCCAGTAC CGCATCTGCG TTGAAGGCCG TCAACTATAA GATTTTGGAT 540 541 CAGGAAAACC GAAGGATATC GATCATTATC AACTCCTCTG CCCCACCACA TTCGGTACAG 600 601 AACGAACTGA AGCCTGAACA AGTAGAGCAG CTAAAGCTGA TCATGAGCAA ACGATATGAT 660 661 GGCTCCCAAC AAGCGCTTGA CCTCAAGGGC CTCCGTTCAG ACCCAGACTT GGTGGCCCAG 720 721 AACATCGATG TCGTCTTGAA TCGCAGGAGC TGTATGGCGG CTACCCTGCG AATCATTGAG 780 781 GAGAACATCC CTGAGCTTTT GTCCTTAAAC TTGAGCAACA ACAGGCTATA CAGGCTGGAT 840 841 GACATGTCCA GCCTTGTGCA GAAAGCACCC AACCTGAAGA TCCTCAACCT CTCTGGAAAT 900 901 GAGTTGAAGT CTGAGAGGGA GTTGGACAAG GTAAAAGGGC TGAAGCTGGA AGAGTTGTGG 960 961 CTCGACGGAA ACCCACTGTG CGACACCTTC CGAGACCAGT CCACCTACAT CAGCGCCATT 1020 1021 CGAGAACGAT TTCCCAAATT GTTACGCCTG GACGGCCACG AGTTACCCCC GCCGATTGCC 1080 1081 TTTGATGTTG AAGCCCCCAC GATGTTACCC CCCTGCAAGG GAAGCTATTT TGGAACAGAG 1140 1141 ACCCTAAAGA ATCTGGTCCT GCACTTCCTG CAGCAGTACT ATGCGGTATA TGACTCTGGA 1200 1201 GACCGGCAGC GGCTCCTGGC TGCCCACGGA GATGGGCAGC GGCTCCTGGA TGCCTACCAC 1260 1261 GACGGGGCCT GCTGCTCCCT CAGCATTCCT TTCACCCCCC AGAACCCTGC CCGAAGCAAC 1320 1321 CTGGCCGAGT ACTTCAAGGA TAGCAGGAAC GTGAAGAAGC TTAAAGACCC GACCCTGCGG 1380 1381 TTCCGGCTGC TGAAGCACAC GCGTCTCAAT GTCGTGGCCT TCCTCAATGA GTTGCCCAAA 1440 1441 ACCCAGCACG ACATCAATTC CTTTGTGGTG GACATAAGCG CCCAGACAAG TACATTGCTG 1500 1501 TGTTTCTCTG TCAACGGGGT CTTCAAAGAA GTGGACGGAA AGTCTCGGGA TTCTTTGCGA 1560 1561 GCCTTCACCC GGACATTTGT CGCTGTTCCT GCCAGCAATT CAGGGCTGTG CATCGTAAAT 1620 1621 GACGAGCTGT TTGTGCGGAA CGCCAGCGCT GATGAGATCC AGAGAGCCTT CGCCATGCCT 1680 1681 GCACCCACCC CTTCCTCCAG CCCAGTGCCC ACCCTGTCCC CAGAGCAGCA GGAGATGCTG 1740 1741 CAGGCGTTCT CTACCCAGTC TGGCATGAAC CTTGAGTGGT CCCAGAAGTG CCTTCAGGAC 1800 1801 AACAACTGGG ACTACACCAG ATCTGCCCAG GCCTTTACTC ATCTCAAGGC CAAGGGCGAG 1860 1861 ATCCCAGAAG TGGCATTTAT GAAGTGA 1887 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Urm-3851 | Ursus maritimus | 97.9 | 0.0 | 1119 |
LLPS-Mup-0702 | Mustela putorius furo | 96.66 | 0.0 | 1127 |
LLPS-Fec-2544 | Felis catus | 96.18 | 0.0 | 1120 |
LLPS-Caf-2644 | Canis familiaris | 95.73 | 0.0 | 1116 |
LLPS-Nol-2433 | Nomascus leucogenys | 93.96 | 0.0 | 734 |
LLPS-Ova-0300 | Ovis aries | 93.06 | 0.0 | 1094 |
LLPS-Cas-2090 | Carlito syrichta | 92.99 | 0.0 | 1087 |
LLPS-Gog-4418 | Gorilla gorilla | 92.85 | 0.0 | 1082 |
LLPS-Sus-4629 | Sus scrofa | 92.7 | 0.0 | 1084 |
LLPS-Mal-3590 | Mandrillus leucophaeus | 92.69 | 0.0 | 1082 |
LLPS-Maf-2756 | Macaca fascicularis | 92.69 | 0.0 | 1082 |
LLPS-Rhb-0451 | Rhinopithecus bieti | 92.69 | 0.0 | 1082 |
LLPS-Pat-1814 | Pan troglodytes | 92.69 | 0.0 | 1082 |
LLPS-Pap-4110 | Pan paniscus | 92.69 | 0.0 | 1082 |
LLPS-Hos-2667 | Homo sapiens | 92.69 | 0.0 | 1082 |
LLPS-Man-2582 | Macaca nemestrina | 92.69 | 0.0 | 1082 |
LLPS-Paa-3530 | Papio anubis | 92.53 | 0.0 | 1080 |
LLPS-Chs-2881 | Chlorocebus sabaeus | 92.53 | 0.0 | 1081 |
LLPS-Cap-3520 | Cavia porcellus | 91.88 | 0.0 | 1085 |
LLPS-Caj-1285 | Callithrix jacchus | 91.73 | 0.0 | 1072 |
LLPS-Myl-3160 | Myotis lucifugus | 90.95 | 0.0 | 1058 |
LLPS-Mea-2081 | Mesocricetus auratus | 90.92 | 0.0 | 1061 |
LLPS-Orc-0776 | Oryctolagus cuniculus | 90.62 | 0.0 | 1063 |
LLPS-Loa-2458 | Loxodonta africana | 90.13 | 0.0 | 1053 |
LLPS-Mam-2306 | Macaca mulatta | 89.49 | 0.0 | 1035 |
LLPS-Ran-2202 | Rattus norvegicus | 89.17 | 0.0 | 1036 |
LLPS-Aon-1619 | Aotus nancymaae | 89.12 | 0.0 | 1030 |
LLPS-Otg-1324 | Otolemur garnettii | 88.91 | 0.0 | 1025 |
LLPS-Ict-1417 | Ictidomys tridecemlineatus | 88.21 | 0.0 | 1016 |
LLPS-Mum-2888 | Mus musculus | 87.58 | 0.0 | 1033 |
LLPS-Dio-1803 | Dipodomys ordii | 86.15 | 7e-14 | 72.8 |
LLPS-Sah-2954 | Sarcophilus harrisii | 80.44 | 0.0 | 944 |
LLPS-Mod-0819 | Monodelphis domestica | 80.16 | 0.0 | 929 |
LLPS-Ten-1092 | Tetraodon nigroviridis | 67.24 | 2e-37 | 140 |
LLPS-Ora-2252 | Ornithorhynchus anatinus | 66.22 | 3e-23 | 99.4 |
LLPS-Asm-0946 | Astyanax mexicanus | 65.36 | 0.0 | 626 |
LLPS-Bot-4150 | Bos taurus | 57.94 | 1e-62 | 218 |
LLPS-Icp-3971 | Ictalurus punctatus | 55.5 | 0.0 | 607 |
LLPS-Dar-2457 | Danio rerio | 53.38 | 3e-167 | 499 |
LLPS-Eqc-4743 | Equus caballus | 52.57 | 4e-96 | 306 |
LLPS-Tut-1463 | Tursiops truncatus | 48.0 | 9e-147 | 444 |
LLPS-Xet-2214 | Xenopus tropicalis | 33.39 | 1e-82 | 277 |
LLPS-Cae-1272 | Caenorhabditis elegans | 29.11 | 5e-37 | 146 |
LLPS-Cogr-0378 | Colletotrichum graminicola | 28.88 | 4e-27 | 120 |
LLPS-Fuv-0756 | Fusarium verticillioides | 28.19 | 3e-21 | 102 |
LLPS-Trv-1466 | Trichoderma virens | 28.08 | 3e-21 | 102 |
LLPS-Fuo-0721 | Fusarium oxysporum | 27.97 | 4e-20 | 99.0 |
LLPS-Coo-1423 | Colletotrichum orbiculare | 27.43 | 5e-27 | 120 |
LLPS-Fus-0715 | Fusarium solani | 26.67 | 9e-19 | 94.7 |
LLPS-Trr-0968 | Trichoderma reesei | 26.64 | 1e-21 | 103 |
LLPS-Nef-1569 | Neosartorya fischeri | 26.17 | 1e-18 | 94.4 |
LLPS-Cog-0177 | Colletotrichum gloeosporioides | 26.09 | 9e-23 | 107 |
LLPS-Asf-1225 | Aspergillus flavus | 26.06 | 7e-20 | 98.2 |
LLPS-Ved-0965 | Verticillium dahliae | 26.04 | 9e-16 | 85.1 |
LLPS-Yal-1450 | Yarrowia lipolytica | 25.75 | 4e-25 | 113 |
LLPS-Mel-0961 | Melampsora laricipopulina | 25.68 | 3e-18 | 92.8 |
LLPS-Aso-0547 | Aspergillus oryzae | 25.6 | 5e-16 | 85.9 |
LLPS-Usm-0454 | Ustilago maydis | 25.6 | 5e-14 | 79.7 |
LLPS-Scs-0376 | Sclerotinia sclerotiorum | 25.54 | 1e-11 | 71.6 |
LLPS-Beb-1318 | Beauveria bassiana | 25.41 | 5e-13 | 76.3 |
LLPS-Asc-0232 | Aspergillus clavatus | 25.11 | 5e-16 | 85.9 |
LLPS-Tum-0825 | Tuber melanosporum | 25.1 | 9e-22 | 103 |
LLPS-Asfu-0308 | Aspergillus fumigatus | 25.05 | 4e-18 | 92.4 |
LLPS-Asni-1322 | Aspergillus niger | 25.0 | 5e-09 | 63.2 |
LLPS-Ast-0544 | Aspergillus terreus | 24.27 | 2e-13 | 77.4 |
LLPS-Drm-1379 | Drosophila melanogaster | 24.23 | 3e-14 | 80.5 |
LLPS-Miv-1572 | Microbotryum violaceum | 24.08 | 4e-17 | 89.4 |
LLPS-Pug-1301 | Puccinia graminis | 24.02 | 1e-12 | 75.1 |
LLPS-Kop-1364 | Komagataella pastoris | 23.92 | 3e-17 | 89.4 |
LLPS-Sac-1365 | Saccharomyces cerevisiae | 23.77 | 2e-08 | 61.6 |
LLPS-Dos-1488 | Dothistroma septosporum | 23.5 | 5e-10 | 66.6 |
LLPS-Asn-0916 | Aspergillus nidulans | 22.84 | 3e-16 | 86.3 |
LLPS-Gag-1086 | Gaeumannomyces graminis | 22.47 | 3e-06 | 54.7 |
LLPS-Put-0718 | Puccinia triticina | 22.27 | 7e-13 | 75.9 |