Schizosaccharomyces pombe      Regulator


※ Regulator introduction

    The LLPS of scaffold proteins and the stability of MLOs can be modulated by PTMs and other proteins (1-4). For example, arginine methylation of FUS by PRMT1 or PRMT8 reduces the LLPS of FUS, and both PRMTs were classified as PTM regulators. Also, Buchan et al. conducted a microscopy-based genetic screen of >4000 gene deletions in Saccharomyces cerevisiae, and identified 125 genes to be involved in regulating the stability and formation of P-bodies and/or stress granules (5). None of these proteins have been characterized to undergo LLPS, and here we classified all the 125 proteins as MLO regulators.

References
1. Vernon, R.M. and Forman-Kay, J.D. (2019) First-generation predictors of biological protein phase separation. Current opinion in structural biology 58, 88-96. PMID: 31252218
2. Wang, Z. and Zhang, H. (2019) Phase Separation, Transition, and Autophagic Degradation of Proteins in Development and Pathogenesis. Trends in cell biology, 29, 417-427. PMID: 30826216
3. Alberti, S., Gladfelter, A. and Mittag, T. (2019) Considerations and challenges in studying liquid-liquid phase separation and biomolecular condensates. Cell, 176, 419-434. PMID: 30682370
4. Bergeron-Sandoval, L.P., Safaee, N. and Michnick, S.W. (2016) Mechanisms and Consequences of Macromolecular Phase Separation. Cell, 165, 1067-1079. PMID: 27203111
5. Buchan, J.R., Kolaitis, R.M., Taylor, J.P. and Parker, R. (2013) Eukaryotic stress granules are cleared by autophagy and Cdc48/VCP function. Cell, 176, 419-434. PMID: 23791177


There are 336 genes.  Reviewed (13 or Unreviewed (323

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Scp-0007
SPCC31H12.08c
O74874
ccr4
2
LLPS-Scp-0070
SPAC17A5.14
P40383
exo2
3
LLPS-Scp-0048
SPBC3D6.08c
P87173
lsm1
4
LLPS-Scp-0140
SPAC2F7.11
Q09702
nrd1
5
LLPS-Scp-0050
SPBP8B7.11
O94260
nxt3
6
LLPS-Scp-0024
SPAC821.12
O13310
orb6
7
LLPS-Scp-0028
SPBC365.06
O13351
pmt3
8
LLPS-Scp-0099
SPAC6B12.15
Q10281
rkp1
9
LLPS-Scp-0022
SPCC757.09c
O74919
rnc1
10
LLPS-Scp-0026
SPAC25G10.08
Q10425
SPAC25G10.08
11
LLPS-Scp-0056
SPCC16C4.09
O74454
sts5
12
LLPS-Scp-0053
SPAC24B11.06c
Q09892
sty1
13
LLPS-Scp-0058
SPBP8B7.21
O94269
ubp3
14
LLPS-Scp-0963
SPBC14F5.09c
O60105
ade8
15
LLPS-Scp-0231
SPCC338.14
P78825
ado1
16
LLPS-Scp-0847
SPAC23C11.09
O13914
ala1
17
LLPS-Scp-0842
SPBP23A10.04
Q874R3
apc2
18
LLPS-Scp-0685
SPBC947.02
O43079
apl2
19
LLPS-Scp-1087
SPAC4F10.07c
O36019
atg13
20
LLPS-Scp-1397
SPAC589.07c
Q9HDZ7
atg18
21
LLPS-Scp-1104
SPBC3B9.06c
O43035
atg3
22
LLPS-Scp-0696
SPBC6B1.05c
O43069
atg7
23
LLPS-Scp-1469
SPBP8B7.24c
O94272
atg8
24
LLPS-Scp-1606
SPCC1840.06
O74479
atp5
25
LLPS-Scp-0633
SPCC1919.14c
O94481
bdp1
26
LLPS-Scp-0439
SPAC22A12.15c
P36604
bip1
27
LLPS-Scp-0282
SPBC31E1.06
O94653
bms1
28
LLPS-Scp-1239
SPBC215.02
O94307
bob1
29
LLPS-Scp-0392
SPBC800.06
Q9HGL6
brx1
30
LLPS-Scp-1170
SPAC13D6.04c
Q10225
btb3
31
LLPS-Scp-0644
SPAC4F10.14c
Q92371
btf3
32
LLPS-Scp-1496
SPCC18.06c
O74856
caf1
33
LLPS-Scp-0602
SPAC6G10.07
O14253
cbc1
34
LLPS-Scp-0244
SPBC13A2.01c
Q9P383
cbc2
35
LLPS-Scp-0612
SPAC29A4.04c
O14007
cbf5
36
LLPS-Scp-0300
SPBC12D12.03
O94501
cct1
37
LLPS-Scp-0631
SPBC1A4.08c
O74341
cct3
38
LLPS-Scp-0202
SPBC25H2.12c
P87153
cct7
39
LLPS-Scp-0474
SPBC14C8.07c
P41411
cdc18
40
LLPS-Scp-0658
SPBC11B10.09
P04551
cdc2
41
LLPS-Scp-0347
SPAC1F7.05
P36602
cdc22
42
LLPS-Scp-0276
SPAC110.03
Q01112
cdc42
43
LLPS-Scp-0603
SPAC1565.08
Q9P3A7
cdc48
44
LLPS-Scp-0272
SPBC17G9.02c
Q9UUE7
cdc73
45
LLPS-Scp-1193
SPBC32H8.10
Q96WV9
cdk9
46
LLPS-Scp-0266
SPBC1709.08
O74733
cft1
47
LLPS-Scp-1121
SPBC1709.15c
O74740
cft2
48
LLPS-Scp-1575
SPBC26H8.03
O74787
cho2
49
LLPS-Scp-1230
SPCC663.05c
O74515
cia1
50
LLPS-Scp-1047
SPCC663.12
O74518
cid12
51
LLPS-Scp-0922
SPAC1851.03
P40232
ckb1
52
LLPS-Scp-1262
SPBC19F8.07
Q12126
crk1
53
LLPS-Scp-0013
SPBP4H10.06c
P41003
cut14
54
LLPS-Scp-0360
SPAC56E4.04c
P78820
cut6
55
LLPS-Scp-0270
SPBC215.12
O94316
cwf10
56
LLPS-Scp-0532
SPBC13E7.01
Q9P6R9
cwf22
57
LLPS-Scp-0493
SPCC10H11.02
Q9P7C6
cwf23
58
LLPS-Scp-0774
SPBC29A3.18
O59680
cyt1
59
LLPS-Scp-1418
SPAC17A5.02c
O13765
dbr1
60
LLPS-Scp-0101
SPCC188.13c
Q09884
dcr1
61
LLPS-Scp-0261
SPCC1795.11
O13370
ded1
62
LLPS-Scp-0794
SPAC1093.06c
O13290
dhc1
63
LLPS-Scp-0200
SPAC26A3.12c
P40848
dhp1
64
LLPS-Scp-0875
SPBC646.17c
O94518
dic1
65
LLPS-Scp-0457
SPBC336.02
Q9USU2
dim1
66
LLPS-Scp-0472
SPBC26H8.10
P37202
dis3
67
LLPS-Scp-0090
SPAC926.07c
Q9UR05
dlc2
68
LLPS-Scp-0657
SPAC513.01c
O14460
eft202
69
LLPS-Scp-0210
SPBC25H2.05
P87147
egd2
70
LLPS-Scp-0808
SPBC4C3.07
O43060
eif3f
71
LLPS-Scp-0363
SPBC1861.07
Q9USX9
elc1
72
LLPS-Scp-1453
SPAPB17E12.08
Q8TFH6
eos1
73
LLPS-Scp-0316
SPBC4F6.13c
O74399
erb1
74
LLPS-Scp-0289
SPAC20G8.07c
P87113
erg2
75
LLPS-Scp-1371
SPBC16G5.18
Q09195
erg24
76
LLPS-Scp-0195
SPBC28E12.05
O74362
esf2
77
LLPS-Scp-1408
SPBC32H8.04c
O13610
fcf1
78
LLPS-Scp-0769
SPAC3G9.15c
O42877
fcf2
79
LLPS-Scp-1325
SPCC24B10.07
Q9P7J8
gad8
80
LLPS-Scp-0201
SPBC36B7.09
Q9HGN1
gcn2
81
LLPS-Scp-0944
SPAC1952.05
Q9UUK2
gcn5
82
LLPS-Scp-0935
SPBC31E1.05
O94652
gle1
83
LLPS-Scp-0651
SPCC1020.09
O59762
gnr1
84
LLPS-Scp-0424
SPBC26H8.08c
O74791
grn1
85
LLPS-Scp-0335
SPAC3F10.03
Q10179
grs1
86
LLPS-Scp-0763
SPAC3F10.04
P35669
gsa1
87
LLPS-Scp-0619
SPAC1F7.02c
Q09916
has1
88
LLPS-Scp-0942
SPAC4F8.14c
P54874
hcs1
89
LLPS-Scp-0829
SPCC18.09c
O74859
hnt3
90
LLPS-Scp-1425
SPAC222.07c
Q9UTE5
hri2
91
LLPS-Scp-0913
SPAC3G6.01
O14139
hrp3
92
LLPS-Scp-0946
SPAC2E12.02
Q02953
hsf1
93
LLPS-Scp-0309
SPBC16D10.08c
O94641
hsp104
94
LLPS-Scp-0529
SPAC30D11.13
P40984
hus5
95
LLPS-Scp-0915
SPBC902.05c
Q9USP8
idh2
96
LLPS-Scp-0208
SPBC36.07
O59704
iki3
97
LLPS-Scp-0605
SPBC1604.08c
O94374
imp1
98
LLPS-Scp-0299
SPAC19D5.05c
O13835
imp3
99
LLPS-Scp-1264
SPBC646.09c
O94513
int6
100
LLPS-Scp-0992
SPAC2F3.06c
O14089
kap104
101
LLPS-Scp-0081
SPBC2F12.13
O14343
klp5
102
LLPS-Scp-0894
SPBC17G9.03c
Q9UUE6
krs1
103
LLPS-Scp-0790
SPCC794.07
O59816
lat1
104
LLPS-Scp-1135
SPAC3F10.16c
Q10190
lsg1
105
LLPS-Scp-1348
SPAC2F3.17c
Q9UUI1
lsm6
106
LLPS-Scp-1499
SPAC3F10.10c
P31397
map3
107
LLPS-Scp-0584
SPBC1734.11
O74752
mas5
108
LLPS-Scp-0377
SPBC4.04c
P40377
mcm2
109
LLPS-Scp-0314
SPCC16A11.17
P29458
mcm4
110
LLPS-Scp-0385
SPAC1B2.05
P41389
mcm5
111
LLPS-Scp-0693
SPBC211.04c
P49731
mcm6
112
LLPS-Scp-0701
SPBC25D12.03c
O75001
mcm7
113
LLPS-Scp-0348
SPAC1002.15c
Q9US45
med6
114
LLPS-Scp-1228
SPAC1F3.02c
Q10407
mkh1
115
LLPS-Scp-1224
SPAC1039.10
Q9UR06
mmf2
116
LLPS-Scp-0702
SPBC3B9.08c
O43037
mnh1
117
LLPS-Scp-0485
SPAC637.07
O94236
moe1
118
LLPS-Scp-0259
SPAC1D4.03c
Q10150
mon1
119
LLPS-Scp-0476
SPCC1906.01
O74484
mpg1
120
LLPS-Scp-0937
SPAC23C11.03
O13910
mpp10
121
LLPS-Scp-0671
SPCC1739.02c
O74464
mrpl22
122
LLPS-Scp-0781
SPAC637.12c
O94446
mst1
123
LLPS-Scp-0315
SPAC15A10.05c
O13725
mug182
124
LLPS-Scp-0689
SPAC19G12.17
G2TRN4
new10
125
LLPS-Scp-0818
SPAC4A8.16c
O14164
nip1
126
LLPS-Scp-1420
SPAC16C9.03
Q09817
nmd3
127
LLPS-Scp-0255
SPAP27G11.13c
Q9P7M5
nop10
128
LLPS-Scp-0191
SPAC16E8.06c
O13741
nop12
129
LLPS-Scp-0845
SPAC20G8.06
P87112
not1
130
LLPS-Scp-1099
SPCC4G3.15c
P87240
not2
131
LLPS-Scp-1448
SPAC15F9.03c
Q10100
ntf2
132
LLPS-Scp-0294
SPCC162.08c
O74424
nup211
133
LLPS-Scp-0634
SPBC6B1.08c
Q11120
ofd1
134
LLPS-Scp-1203
SPBC19C7.12c
O60160
omh1
135
LLPS-Scp-0997
SPAPB17E12.11
Q8TFH3
ost3
136
LLPS-Scp-0718
SPAP8A3.09c
Q9UT08
paa1
137
LLPS-Scp-0443
SPBC16E9.12c
O14327
pab2
138
LLPS-Scp-1411
SPAC22F8.06
Q9UQY2
pam1
139
LLPS-Scp-0615
SPCC16C4.03
O74448
pin1
140
LLPS-Scp-0372
SPBC31E1.02c
O59868
pmr1
141
LLPS-Scp-1210
SPAC29E6.01
Q09855
pof11
142
LLPS-Scp-0086
SPAC2F7.03c
Q09690
pom1
143
LLPS-Scp-0288
SPAC25B8.16
Q9UTA4
pop1
144
LLPS-Scp-0089
SPBC16H5.07c
P23636
ppa2
145
LLPS-Scp-0311
SPAC57A10.03
P87051
ppi1
146
LLPS-Scp-1605
SPBC4C3.10c
O43063
pre3
147
LLPS-Scp-0449
SPBC106.16
Q10329
pre6
148
LLPS-Scp-1563
SPAC6B12.10c
O14215
pri1
149
LLPS-Scp-1319
SPCC126.14
O94406
prp18
150
LLPS-Scp-0596
SPBC146.07
P36629
prp2
151
LLPS-Scp-1541
SPBC16E9.18
O14333
psd1
152
LLPS-Scp-1611
SPCC830.07c
Q09912
psi1
153
LLPS-Scp-0856
SPAC1071.01c
Q10222
pta1
154
LLPS-Scp-0254
SPAC4A8.13c
P30655
pts1
155
LLPS-Scp-1116
SPAC1687.22c
O94462
puf3
156
LLPS-Scp-1542
SPAC23D3.07
Q09841
pup1
157
LLPS-Scp-0465
SPAC323.02c
Q9UT97
pup2
158
LLPS-Scp-0534
SPCC63.12c
Q9Y7T8
pup3
159
LLPS-Scp-0394
SPCC737.02c
O74533
qcr7
160
LLPS-Scp-0251
SPAC3G6.06c
P39750
rad2
161
LLPS-Scp-1419
SPBC216.05
Q02099
rad3
162
LLPS-Scp-0001
SPBC16A3.05c
P41838
rae1
163
LLPS-Scp-0650
SPCC285.08
O74496
ret2
164
LLPS-Scp-0365
SPCC1259.03
O94703
rpa12
165
LLPS-Scp-0489
SPAC23G3.01
Q02061
rpb2
166
LLPS-Scp-0590
SPCC1020.04c
P36595
rpb6
167
LLPS-Scp-0801
SPAC1687.01
Q09177
rpc19
168
LLPS-Scp-0623
SPAC4G9.08c
Q10233
rpc2
169
LLPS-Scp-0341
SPBC1289.07c
O94616
rpc40
170
LLPS-Scp-1049
SPAPB1E7.03
Q9C106
rpc82
171
LLPS-Scp-0386
SPAP7G5.05
Q9P769
rpl1002
172
LLPS-Scp-1021
SPBC17G9.10
P0CT78
rpl1102
173
LLPS-Scp-0213
SPCC364.03
O59794
rpl1702
174
LLPS-Scp-0767
SPAPB17E12.13
Q8TFH1
rpl1802
175
LLPS-Scp-0273
SPAC26A3.04
P0CT69
rpl2002
176
LLPS-Scp-0676
SPAC11E3.15
Q09668
rpl22
177
LLPS-Scp-0878
SPAC3H5.10
P79015
rpl3202
178
LLPS-Scp-0880
SPCC613.05c
O74904
rpl35
179
LLPS-Scp-1517
SPAPB17E12.05
P59289
rpl3703
180
LLPS-Scp-0521
SPCC663.04
P05767
rpl39
181
LLPS-Scp-0889
SPAC15E1.03
Q9UTI8
rpl42
182
LLPS-Scp-0456
SPAC3H5.12c
P52822
rpl501
183
LLPS-Scp-0762
SPBP19A11.03c
P87048
rpn1
184
LLPS-Scp-0708
SPAC31G5.13
P41878
rpn11
185
LLPS-Scp-0800
SPBC119.01
O42897
rpn3
186
LLPS-Scp-1436
SPCC18.14c
O74864
rpp0
187
LLPS-Scp-0733
SPBC685.06
Q9Y7L8
rps001
188
LLPS-Scp-1000
SPAPJ698.02c
Q9P546
rps002
189
LLPS-Scp-0366
SPBC1685.02c
O74322
rps1202
190
LLPS-Scp-0743
SPBC649.02
P79016
rps1902
191
LLPS-Scp-0713
SPCC576.08c
O74892
rps2
192
LLPS-Scp-0536
SPCC576.09
O74893
rps20
193
LLPS-Scp-0838
SPBC18E5.06
P05764
rps21
194
LLPS-Scp-1588
SPAC5D6.01
P0CT59
rps2202
195
LLPS-Scp-1012
SPBP4H10.13
P0CT76
rps2302
196
LLPS-Scp-0739
SPBC17G9.07
O59865
rps2402
197
LLPS-Scp-0503
SPCC285.15c
P0CT80
rps2802
198
LLPS-Scp-1046
SPBC1685.09
O74329
rps29
199
LLPS-Scp-0837
SPBC19G7.03c
P0CT63
rps3002
200
LLPS-Scp-0857
SPBC29A3.12
O59675
rps902
201
LLPS-Scp-0761
SPBC16C6.07c
O42931
rpt1
202
LLPS-Scp-0699
SPCC576.10c
O74894
rpt3
203
LLPS-Scp-0687
SPAC22F8.09
Q9UUI4
rrp16
204
LLPS-Scp-0428
SPAC823.04
Q9P6P2
rrp36
205
LLPS-Scp-0432
SPAC22A12.12c
O13903
rrp40
206
LLPS-Scp-0374
SPCC1183.07
O74835
rrp5
207
LLPS-Scp-0198
SPAC56F8.09
Q10257
rrp8
208
LLPS-Scp-0233
SPAPB8E5.09
Q9C0X6
rvb1
209
LLPS-Scp-0245
SPBC83.08
O94692
rvb2
210
LLPS-Scp-0265
SPCC1840.03
O74476
sal3
211
LLPS-Scp-1217
SPBC1773.07c
Q09717
sbp1
212
LLPS-Scp-0268
SPAC688.13
P41890
scn1
213
LLPS-Scp-0910
SPBC119.06
O42899
sco1
214
LLPS-Scp-1013
SPBC106.14c
Q10342
sda1
215
LLPS-Scp-0199
SPAC959.02
Q9P4X4
sec17
216
LLPS-Scp-1481
SPAC1834.11c
Q9P7Q4
sec18
217
LLPS-Scp-1167
SPAC30.01c
Q9P7V5
sec72
218
LLPS-Scp-0533
SPBC8D2.14c
O13644
sed5
219
LLPS-Scp-1176
SPAC29B12.02c
O14026
set2
220
LLPS-Scp-1254
SPBC1604.14c
P50527
shk1
221
LLPS-Scp-0983
SPBC16H5.11c
P78963
skb1
222
LLPS-Scp-1277
SPBC409.05
Q9Y709
skp1
223
LLPS-Scp-1019
SPCC74.01
O74534
sly1
224
LLPS-Scp-0881
SPAC26A3.08
Q10163
smb1
225
LLPS-Scp-0395
SPAC27D7.07c
O42661
smd1
226
LLPS-Scp-0648
SPCC645.08c
Q9Y7U7
snd1
227
LLPS-Scp-0323
SPAC1142.04
Q9P7G0
SPAC1142.04
228
LLPS-Scp-0411
SPAC12G12.06c
Q09870
SPAC12G12.06c
229
LLPS-Scp-1562
SPAC13C5.01c
Q09682
SPAC13C5.01c
230
LLPS-Scp-1510
SPAC1527.03
Q9P6K0
SPAC1527.03
231
LLPS-Scp-1556
SPAC17H9.04c
O13801
SPAC17H9.04c
232
LLPS-Scp-1572
SPAC19B12.01
O36033
SPAC19B12.01
233
LLPS-Scp-1447
SPAC19G12.09
O13848
SPAC19G12.09
234
LLPS-Scp-0513
SPAC1B9.03c
O14206
SPAC1B9.03c
235
LLPS-Scp-0728
SPAC227.10
Q9UTC9
SPAC227.10
236
LLPS-Scp-1518
SPAC22E12.01
Q10354
SPAC22E12.01
237
LLPS-Scp-1091
SPAC22G7.10
Q09801
SPAC22G7.10
238
LLPS-Scp-0958
SPAC23A1.09
O42847
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