Oryza brachyantha      Regulator


※ Regulator introduction

    The LLPS of scaffold proteins and the stability of MLOs can be modulated by PTMs and other proteins (1-4). For example, arginine methylation of FUS by PRMT1 or PRMT8 reduces the LLPS of FUS, and both PRMTs were classified as PTM regulators. Also, Buchan et al. conducted a microscopy-based genetic screen of >4000 gene deletions in Saccharomyces cerevisiae, and identified 125 genes to be involved in regulating the stability and formation of P-bodies and/or stress granules (5). None of these proteins have been characterized to undergo LLPS, and here we classified all the 125 proteins as MLO regulators.

References
1. Vernon, R.M. and Forman-Kay, J.D. (2019) First-generation predictors of biological protein phase separation. Current opinion in structural biology 58, 88-96. PMID: 31252218
2. Wang, Z. and Zhang, H. (2019) Phase Separation, Transition, and Autophagic Degradation of Proteins in Development and Pathogenesis. Trends in cell biology, 29, 417-427. PMID: 30826216
3. Alberti, S., Gladfelter, A. and Mittag, T. (2019) Considerations and challenges in studying liquid-liquid phase separation and biomolecular condensates. Cell, 176, 419-434. PMID: 30682370
4. Bergeron-Sandoval, L.P., Safaee, N. and Michnick, S.W. (2016) Mechanisms and Consequences of Macromolecular Phase Separation. Cell, 165, 1067-1079. PMID: 27203111
5. Buchan, J.R., Kolaitis, R.M., Taylor, J.P. and Parker, R. (2013) Eukaryotic stress granules are cleared by autophagy and Cdc48/VCP function. Cell, 176, 419-434. PMID: 23791177


There are 339 genes.  Reviewed (0 or Unreviewed (339

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Orbr-0021
OB03G45150
J3LTY9
2
LLPS-Orbr-0031
OB10G16160
J3N268
3
LLPS-Orbr-0057
OB10G13510
J3N1F3
4
LLPS-Orbr-0072
OB05G23190
J3M6U5
5
LLPS-Orbr-0077
OB08G14700
J3MQU1
6
LLPS-Orbr-0080
OB02G43090
J3LI42
7
LLPS-Orbr-0113
OB02G42770
J3LI10
8
LLPS-Orbr-0122
OB12G16800
J3NCH2
9
LLPS-Orbr-0142
OB01G16470
J3KXE1
10
LLPS-Orbr-0147
OB03G35300
J3LR54
11
LLPS-Orbr-0162
OB10G26500
J3N552
12
LLPS-Orbr-0163
OB08G11610
J3MPY2
13
LLPS-Orbr-0177
OB01G39560
J3L400
14
LLPS-Orbr-0263
OB10G17580
J3N2L0
15
LLPS-Orbr-0284
OB04G23860
J3LZ11
16
LLPS-Orbr-0308
OB06G20630
J3MDG9
17
LLPS-Orbr-0314
OB07G14980
J3MJB6
18
LLPS-Orbr-0341
OB03G14070
J3LK31
19
LLPS-Orbr-0355
OB01G54960
J3L8E0
20
LLPS-Orbr-0357
OB08G28770
J3MUU6
21
LLPS-Orbr-0361
OB08G19940
J3MSB5
22
LLPS-Orbr-0421
OB04G37740
J3M2Z9
23
LLPS-Orbr-0425
OB07G25760
J3MME4
24
LLPS-Orbr-0451
OB02G31630
J3LEU6
25
LLPS-Orbr-0559
OB07G14950
J3MJB3
26
LLPS-Orbr-0565
OB06G35770
J3MHT3
27
LLPS-Orbr-0572
OB02G39060
J3LGY9
28
LLPS-Orbr-0589
OB03G10230
J3LIZ7
29
LLPS-Orbr-0609
OB10G13180
J3N1C0
30
LLPS-Orbr-0633
OB07G12640
J3MIN2
31
LLPS-Orbr-0654
OB09G21070
J3MYM8
32
LLPS-Orbr-0709
OB07G19100
J3MKH8
33
LLPS-Orbr-0722
OB04G33170
J3M1P2
34
LLPS-Orbr-0733
OB09G14590
J3MWT0
35
LLPS-Orbr-0735
OB01G20030
J3KYE7
36
LLPS-Orbr-0741
OB01G27790
J3L0M3
37
LLPS-Orbr-0759
OB03G29170
J3LPE1
38
LLPS-Orbr-0785
OB09G23010
J3MZ72
39
LLPS-Orbr-0823
OB11G24550
J3N9G9
40
LLPS-Orbr-0835
OB04G18190
J3LXE4
41
LLPS-Orbr-0918
OB11G20780
J3N8E2
42
LLPS-Orbr-0924
OB03G15030
J3N2K8
43
LLPS-Orbr-0929
OB06G11620
J3MAW8
44
LLPS-Orbr-0933
OB09G24690
J3MZP0
45
LLPS-Orbr-0938
OB04G26840
J3LZV9
46
LLPS-Orbr-0964
OB03G39580
J3LSD2
47
LLPS-Orbr-0968
OB09G24380
J3MZK9
48
LLPS-Orbr-0969
OB02G42750
J3LI08
49
LLPS-Orbr-0979
OB04G20750
J3LY50
50
LLPS-Orbr-1079
OB03G11420
J3LJB6
51
LLPS-Orbr-1108
OB04G29400
J3M0L5
52
LLPS-Orbr-1126
OB03G33160
J3LQJ0
53
LLPS-Orbr-1145
OB03G12020
J3LJH6
54
LLPS-Orbr-1179
OB10G21050
J3N3K7
55
LLPS-Orbr-1207
OB03G45540
J3LU28
56
LLPS-Orbr-1262
OB03G35330
J3LR57
57
LLPS-Orbr-1282
OB10G25960
J3N4Z8
58
LLPS-Orbr-1318
OB03G18500
J3LLC4
59
LLPS-Orbr-1402
OB0043G10080
J3KU74
60
LLPS-Orbr-1435
OB02G13840
J3L9R7
61
LLPS-Orbr-1458
OB04G28910
J3M0G6
62
LLPS-Orbr-1475
OB03G22860
J3LML0
63
LLPS-Orbr-1484
OB10G17850
J3N2N7
64
LLPS-Orbr-1494
OB07G27690
J3MMY7
65
LLPS-Orbr-1510
OB06G35600
J3MHR6
66
LLPS-Orbr-1518
OB07G21990
J3MLB7
67
LLPS-Orbr-1583
OB01G50750
J3L769
68
LLPS-Orbr-1614
OB03G19780
69
LLPS-Orbr-1627
OB06G10350
J3MAJ1
70
LLPS-Orbr-1663
OB02G41200
J3LHK3
71
LLPS-Orbr-1703
OB04G14080
J3LW83
72
LLPS-Orbr-1722
OB02G37770
J3LGL0
73
LLPS-Orbr-1756
OB12G14960
J3NBY8
74
LLPS-Orbr-1774
OB11G25490
J3N9R3
75
LLPS-Orbr-1838
OB03G11780
J3LJF2
76
LLPS-Orbr-1877
OB05G33540
J3M9T0
77
LLPS-Orbr-1888
OB01G10580
J3KVQ2
78
LLPS-Orbr-1932
OB05G32660
J3M9J2
79
LLPS-Orbr-1938
OB06G14830
J3MRS3
80
LLPS-Orbr-1973
OB01G18320
J3KXX6
81
LLPS-Orbr-2006
OB03G26510
J3LNM5
82
LLPS-Orbr-2014
OB03G37650
J3LRT9
83
LLPS-Orbr-2024
OB10G20370
J3N3D9
84
LLPS-Orbr-2103
OB03G30720
J3LPU6
85
LLPS-Orbr-2138
OB08G28370
J3MUQ6
86
LLPS-Orbr-2159
OB03G39250
J3LS99
87
LLPS-Orbr-2173
OB08G21380
J3MSQ8
88
LLPS-Orbr-2175
OB02G24990
J3LCY2
89
LLPS-Orbr-2195
OB03G23610
J3LMT5
90
LLPS-Orbr-2208
OB01G46480
J3L5Z2
91
LLPS-Orbr-2215
OB08G13490
J3MQH0
92
LLPS-Orbr-2222
OB05G30590
J3M8Y5
93
LLPS-Orbr-2234
OB01G15010
J3KWZ5
94
LLPS-Orbr-2245
OB06G13230
J3MBC9
95
LLPS-Orbr-2275
OB02G35680
J3LG01
96
LLPS-Orbr-2280
OB07G20910
J3ML09
97
LLPS-Orbr-0345
OB05G16330
J3M4V9
102699402
98
LLPS-Orbr-0445
OB01G25660
J3L010
102699442
99
LLPS-Orbr-0632
OB11G18020
J3N7L6
102699451
100
LLPS-Orbr-0648
OB02G41730
J3LHQ6
102699476
101
LLPS-Orbr-2194
OB02G12530
J3L9D6
102699839
102
LLPS-Orbr-0955
OB03G26060
J3LNI0
102699849
103
LLPS-Orbr-0816
OB12G20540
J3NDJ6
102699915
104
LLPS-Orbr-0545
OB05G13720
J3M448
102699958
105
LLPS-Orbr-1029
OB03G37930
J3LRW7
102700039
106
LLPS-Orbr-0518
OB03G44640
J3LTT8
102700046
107
LLPS-Orbr-0882
OB06G26510
J3MF57
102700533
108
LLPS-Orbr-0169
OB03G31010
J3LPX5
102700604
109
LLPS-Orbr-0036
OB09G10480
J3MVM0
102700923
110
LLPS-Orbr-0132
OB02G10440
J3L8S7
102701327
111
LLPS-Orbr-1249
OB02G26410
J3LDC4
102701330
112
LLPS-Orbr-0634
OB01G50470
J3L741
102701398
113
LLPS-Orbr-0167
OB03G28190
J3LP43
102701427
114
LLPS-Orbr-0088
OB11G24960
J3N9L0
102701489
115
LLPS-Orbr-0291
OB02G18480
J3LB31
102701511
116
LLPS-Orbr-0538
OB12G18020
J3NCU4
102701679
117
LLPS-Orbr-1438
OB02G12900
J3L9H3
102701698
118
LLPS-Orbr-1358
OB07G19580
J3MKM6
102701837
119
LLPS-Orbr-2186
OB07G32870
J3MPF5
102701841
120
LLPS-Orbr-0516
OB02G23500
J3LCI3
102701888
121
LLPS-Orbr-0723
OB12G15170
J3NC09
102701958
122
LLPS-Orbr-0081
OB05G19170
J3M5P3
102702377
123
LLPS-Orbr-0261
OB02G26380
J3LDC1
102702441
124
LLPS-Orbr-1975
OB03G23180
J3LMP2
102702542
125
LLPS-Orbr-1699
OB07G25230
J3MM91
102702583
126
LLPS-Orbr-1241
OB07G24540
J3MM22
102703048
127
LLPS-Orbr-0503
OB05G14450
J3M4C1
102703124
128
LLPS-Orbr-1098
OB01G11370
J3KVY1
102703154
129
LLPS-Orbr-0097
OB01G50650
J3L759
102703258
130
LLPS-Orbr-1343
OB06G15420
J3MBZ8
102703312
131
LLPS-Orbr-1341
OB09G10900
J3MVR2
102703333
132
LLPS-Orbr-0144
OB08G22110
J3MSY1
102703603
133
LLPS-Orbr-0049
OB10G21530
J3N3Q5
102703622
134
LLPS-Orbr-0483
OB06G23750
J3MED1
102703974
135
LLPS-Orbr-0448
OB07G26930
J3MMR1
102703985
136
LLPS-Orbr-0219
OB01G29200
J3L114
102704008
137
LLPS-Orbr-0590
OB0039G10080
J3KU34
102704202
138
LLPS-Orbr-0342
OB07G26940
J3MMR2
102704262
139
LLPS-Orbr-0333
OB08G12160
J3MQ37
102704270
140
LLPS-Orbr-0819
OB02G10970
J3L8Y0
102704311
141
LLPS-Orbr-0872
OB03G17400
J3LL14
102704317
142
LLPS-Orbr-2254
OB02G10760
J3L8V9
102704391
143
LLPS-Orbr-0736
OB03G33300
J3LQK4
102704405
144
LLPS-Orbr-0708
OB02G42360
J3LHW9
102704495
145
LLPS-Orbr-1168
OB03G36110
J3LRD5
102704687
146
LLPS-Orbr-2171
OB0207G10020
J3L8G4
102704769
147
LLPS-Orbr-1548
OB05G19540
J3M5T0
102704803
148
LLPS-Orbr-1205
OB10G13390
J3N1E1
102704917
149
LLPS-Orbr-0958
OB02G12780
J3L9G1
102704944
150
LLPS-Orbr-0312
OB02G31070
J3LEP0
102705044
151
LLPS-Orbr-0623
OB06G33950
J3MHA1
102705083
152
LLPS-Orbr-0808
OB07G13830
J3MJ01
102705089
153
LLPS-Orbr-0693
OB04G23920
J3LZ17
102705153
154
LLPS-Orbr-0327
OB03G26500
J3LNM4
102705325
155
LLPS-Orbr-0878
OB03G24860
J3LN60
102705331
156
LLPS-Orbr-2097
OB05G22000
J3M6H6
102705344
157
LLPS-Orbr-1654
OB09G25850
J3N006
102705464
158
LLPS-Orbr-1931
OB03G28650
J3LP89
102705608
159
LLPS-Orbr-1274
OB11G19980
J3N862
102705763
160
LLPS-Orbr-1735
OB09G24580
J3MZM9
102705840
161
LLPS-Orbr-0583
OB02G31110
J3LEP4
102705879
162
LLPS-Orbr-0482
OB10G16750
J3N2C7
102706130
163
LLPS-Orbr-0492
OB03G26550
J3LNM9
102706176
164
LLPS-Orbr-2220
OB01G50390
J3L733
102706253
165
LLPS-Orbr-1891
OB02G44790
J3LIL2
102706448
166
LLPS-Orbr-0776
OB03G26570
J3LNN1
102706458
167
LLPS-Orbr-1311
OB03G25030
J3LN77
102706461
168
LLPS-Orbr-1006
OB06G13250
J3MBD1
102706481
169
LLPS-Orbr-0346
OB06G34020
J3MHA8
102706484
170
LLPS-Orbr-0178
OB01G45770
J3L5S1
102706516
171
LLPS-Orbr-0970
OB05G17250
J3M551
102706656
172
LLPS-Orbr-1893
OB05G17280
J3M554
102706940
173
LLPS-Orbr-1747
OB01G49020
J3L6P6
102707167
174
LLPS-Orbr-0272
OB03G45320
J3LU06
102707300
175
LLPS-Orbr-2108
OB05G22190
J3M6J5
102707311
176
LLPS-Orbr-0880
OB10G25320
J3N4T4
102707524
177
LLPS-Orbr-1427
OB01G50550
J3L749
102707645
178
LLPS-Orbr-0043
OB02G14940
J3LA27
102707743
179
LLPS-Orbr-0008
OB03G14080
J3LK32
102707752
180
LLPS-Orbr-0831
OB02G25890
J3LD72
102707838
181
LLPS-Orbr-0942
OB02G36410
J3LG74
102707840
182
LLPS-Orbr-0768
OB02G41360
J3LHL9
102707933
183
LLPS-Orbr-1539
OB01G45900
J3L5T4
102708196
184
LLPS-Orbr-1998
OB03G29640
J3LPI8
102708232
185
LLPS-Orbr-1254
OB09G11100
J3MVT2
102708461
186
LLPS-Orbr-0424
OB01G28900
J3L0Y4
102708474
187
LLPS-Orbr-2342
OB02G21650
J3LBZ8
102708771
188
LLPS-Orbr-1683
OB05G30610
J3M8Y7
102708800
189
LLPS-Orbr-0484
OB04G25920
J3LZL7
102708888
190
LLPS-Orbr-0087
OB02G19280
J3LBB1
102708961
191
LLPS-Orbr-0376
OB04G34270
J3M202
102708988
192
LLPS-Orbr-0414
OB04G29500
J3M0M5
102709072
193
LLPS-Orbr-2077
OB06G34460
J3MHF2
102709094
194
LLPS-Orbr-0495
OB06G30130
J3MG69
102709375
195
LLPS-Orbr-0020
OB05G34200
J3M9Z6
102709464
196
LLPS-Orbr-0640
OB03G26800
J3LNQ4
102709543
197
LLPS-Orbr-1525
OB01G32150
J3L1V9
102709701
198
LLPS-Orbr-1353
OB02G21770
J3LC10
102709901
199
LLPS-Orbr-0116
OB02G38260
J3LGQ9
102709902
200
LLPS-Orbr-0468
OB05G33610
J3M9T7
102709932
201
LLPS-Orbr-1608
OB02G29710
J3LEA4
102709992
202
LLPS-Orbr-1742
OB05G10400
J3M366
102710020
203
LLPS-Orbr-0434
OB04G17470
J3LX72
102710113
204
LLPS-Orbr-1275
OB01G47560
J3L6A0
102710165
205
LLPS-Orbr-1672
OB02G45100
J3LIP3
102710181
206
LLPS-Orbr-1091
OB06G27810
J3MFI7
102710310
207
LLPS-Orbr-0048
OB10G21540
J3N3Q6
102710332
208
LLPS-Orbr-1690
OB01G12630
J3KWA7
102710338
209
LLPS-Orbr-1000
OB01G21220
J3KYR6
102710341
210
LLPS-Orbr-0818
OB05G21230
J3M699
102710409
211
LLPS-Orbr-1575
OB08G10700
J3MPP1
102710426
212
LLPS-Orbr-0191
OB05G12580
J3M3T4
102710493
213
LLPS-Orbr-1830
OB03G44190
J3LTP3
102710572
214
LLPS-Orbr-1096
OB05G28630
J3M8D9
102710699
215
LLPS-Orbr-0155
OB05G32540
J3M9I0
102710875
216
LLPS-Orbr-1679
OB10G22250
J3N3X7
102710911
217
LLPS-Orbr-0046
OB11G12860
J3N650
102710919
218
LLPS-Orbr-1219
OB12G21540
J3NDU6
102710932
219
LLPS-Orbr-1221
OB06G13640
J3MBH0
102710987
220
LLPS-Orbr-0751
OB09G19100
J3MY31
102711012
221
LLPS-Orbr-0401
OB01G19000
J3KY44
102711021
222
LLPS-Orbr-0784
OB01G32300
J3L1X4
102711025
223
LLPS-Orbr-1383
OB06G14120
J3MBL8
102711162
224
LLPS-Orbr-0533
OB05G12920
J3M3W8
102711349
225
LLPS-Orbr-1491
OB11G11770
J3N5U1
102711381
226
LLPS-Orbr-0891
OB04G32780
J3M1K3
102711424
227
LLPS-Orbr-0560
OB04G17740
J3LX99
102711524
228
LLPS-Orbr-1677
OB04G24360
J3LZ61
102711525
229
LLPS-Orbr-1046
OB04G34510
J3M226
102711694
230
LLPS-Orbr-0804
OB02G27620
J3LDP5
102711860
231
LLPS-Orbr-0240
OB04G37170
J3M2U2
102712080
232
LLPS-Orbr-1526
OB08G18260
J3MRU7
102712100
233
LLPS-Orbr-0603
OB10G21670
J3N3R9
102712115
234
LLPS-Orbr-1529
OB07G12440
J3MIL2
102712187
235
LLPS-Orbr-0679
OB03G38740
J3LS48
102712238
236
LLPS-Orbr-1479
OB05G10500
J3M376
102712255
237
LLPS-Orbr-0892
OB02G43590
J3LI92
102712334
238
LLPS-Orbr-0432
OB02G29870
J3LEC0
102712420
239
LLPS-Orbr-1103
OB03G27040
J3LNS8
102712427
240
LLPS-Orbr-1598
OB04G10760
J3LVA1
102712435
241
LLPS-Orbr-1167
OB06G16280
J3MC84
102712450
242
LLPS-Orbr-0243
OB06G19070
J3MD13
102712451
243
LLPS-Orbr-0310
OB09G21890
J3MYW0
102712662
244
LLPS-Orbr-1308
OB02G11680
J3L951
102712697
245
LLPS-Orbr-0568
OB02G11720
J3L955
102712965
246
LLPS-Orbr-0258
OB05G28890
J3M8G5
102713273
247
LLPS-Orbr-2184
OB02G40110
J3LH94
102713444
248
LLPS-Orbr-0402
OB04G14570
J3LWD2
102713539
249
LLPS-Orbr-0522
OB03G18080
J3LL82
102713608
250
LLPS-Orbr-0881
OB08G18560
J3MRX7
102713656
251
LLPS-Orbr-0148
OB03G26000
J3LNH4
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LLPS-Orbr-0536
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LLPS-Orbr-1150
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LLPS-Orbr-2350
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J3N219
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LLPS-Orbr-2083
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LLPS-Orbr-0000
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J3LJK1
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J3LVA2
102722671
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LLPS-Orbr-1071
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J3LSD6
102722754
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LLPS-Orbr-1858
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J3MVA8
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LLPS-Orbr-1263
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J3MPY3
102722882
336
LLPS-Orbr-0420
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J3M2B6
102723046
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LLPS-Orbr-0578
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J3MNF8
EIF6
338
LLPS-Orbr-0792
OB05G31750
J3M9A1
FEN1
339
LLPS-Orbr-1069
OB04G21210
J3LY96
LSM1