Arabidopsis lyrata      Regulator


※ Regulator introduction

    The LLPS of scaffold proteins and the stability of MLOs can be modulated by PTMs and other proteins (1-4). For example, arginine methylation of FUS by PRMT1 or PRMT8 reduces the LLPS of FUS, and both PRMTs were classified as PTM regulators. Also, Buchan et al. conducted a microscopy-based genetic screen of >4000 gene deletions in Saccharomyces cerevisiae, and identified 125 genes to be involved in regulating the stability and formation of P-bodies and/or stress granules (5). None of these proteins have been characterized to undergo LLPS, and here we classified all the 125 proteins as MLO regulators.

References
1. Vernon, R.M. and Forman-Kay, J.D. (2019) First-generation predictors of biological protein phase separation. Current opinion in structural biology 58, 88-96. PMID: 31252218
2. Wang, Z. and Zhang, H. (2019) Phase Separation, Transition, and Autophagic Degradation of Proteins in Development and Pathogenesis. Trends in cell biology, 29, 417-427. PMID: 30826216
3. Alberti, S., Gladfelter, A. and Mittag, T. (2019) Considerations and challenges in studying liquid-liquid phase separation and biomolecular condensates. Cell, 176, 419-434. PMID: 30682370
4. Bergeron-Sandoval, L.P., Safaee, N. and Michnick, S.W. (2016) Mechanisms and Consequences of Macromolecular Phase Separation. Cell, 165, 1067-1079. PMID: 27203111
5. Buchan, J.R., Kolaitis, R.M., Taylor, J.P. and Parker, R. (2013) Eukaryotic stress granules are cleared by autophagy and Cdc48/VCP function. Cell, 176, 419-434. PMID: 23791177


There are 361 genes.  Reviewed (0 or Unreviewed (361

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Arl-1095
fgenesh2_kg.6__1322__AT5G13680.1
D7M5V4
ABO1
2
LLPS-Arl-2448
fgenesh2_kg.5__2052__AT3G56190.1
D7LVD3
ALPHA-SNAP2
3
LLPS-Arl-1375
fgenesh2_kg.3__2801__AT2G04660.1
D7L837
APC2
4
LLPS-Arl-0423
fgenesh1_pm.C_scaffold_1000066
D7KQ66
ARALYDRAFT_311286
5
LLPS-Arl-0321
fgenesh1_pm.C_scaffold_1001363
D7KDL4
ARALYDRAFT_312583
6
LLPS-Arl-2127
fgenesh1_pm.C_scaffold_1001532
D7KG89
ARALYDRAFT_312752
7
LLPS-Arl-2311
fgenesh1_pm.C_scaffold_1002482
D7KFM5
ARALYDRAFT_313702
8
LLPS-Arl-1006
fgenesh1_pm.C_scaffold_4001690
D7LD50
ARALYDRAFT_321633
9
LLPS-Arl-1695
fgenesh1_pm.C_scaffold_4002415
D7LFZ0
ARALYDRAFT_322358
10
LLPS-Arl-0195
fgenesh1_pm.C_scaffold_5000220
D7LQL6
ARALYDRAFT_322676
11
LLPS-Arl-1037
fgenesh1_pm.C_scaffold_8001599
D7KHV6
ARALYDRAFT_323263
12
LLPS-Arl-2925
fgenesh1_pm.C_scaffold_5001586
D7LV15
ARALYDRAFT_324042
13
LLPS-Arl-1717
fgenesh1_pm.C_scaffold_6000255
D7KRV1
ARALYDRAFT_325035
14
LLPS-Arl-2183
fgenesh1_pm.C_scaffold_6002760
D7M3F9
ARALYDRAFT_327540
15
LLPS-Arl-2175
fgenesh1_pm.C_scaffold_7000820
D7MB80
ARALYDRAFT_328593
16
LLPS-Arl-1123
fgenesh1_pm.C_scaffold_7001850
D7MGU7
ARALYDRAFT_329623
17
LLPS-Arl-1362
fgenesh1_pm.C_scaffold_7002682
D7MJ65
ARALYDRAFT_330455
18
LLPS-Arl-0494
fgenesh1_pg.C_scaffold_1000770
D7KJN2
ARALYDRAFT_334205
19
LLPS-Arl-2943
fgenesh1_pg.C_scaffold_2000992
D7KUB0
ARALYDRAFT_338893
20
LLPS-Arl-2426
fgenesh1_pg.C_scaffold_2001495
D7KYX9
ARALYDRAFT_339396
21
LLPS-Arl-1773
fgenesh1_pg.C_scaffold_3001212
D7L1C8
ARALYDRAFT_341449
22
LLPS-Arl-2585
fgenesh1_pg.C_scaffold_3002996
D7L6X8
ARALYDRAFT_343233
23
LLPS-Arl-0496
fgenesh1_pg.C_scaffold_3003254
D7L091
ARALYDRAFT_343491
24
LLPS-Arl-1663
fgenesh1_pg.C_scaffold_4001686
D7LIP0
ARALYDRAFT_345344
25
LLPS-Arl-1372
fgenesh1_pg.C_scaffold_5000346
D7LQX0
ARALYDRAFT_346954
26
LLPS-Arl-0212
fgenesh1_pg.C_scaffold_6000719
D7M1G1
ARALYDRAFT_350126
27
LLPS-Arl-2391
fgenesh1_pg.C_scaffold_7000188
D7M9I5
ARALYDRAFT_353015
28
LLPS-Arl-1303
fgenesh1_pg.C_scaffold_7000413
D7MBR7
ARALYDRAFT_353240
29
LLPS-Arl-1902
fgenesh1_pg.C_scaffold_8000144
D7MRE7
ARALYDRAFT_356357
30
LLPS-Arl-2412
fgenesh2_kg.1__32__AT1G01960.1
D7KP56
ARALYDRAFT_470078
31
LLPS-Arl-2774
fgenesh2_kg.1__35__AT1G01930.1
D7KP59
ARALYDRAFT_470081
32
LLPS-Arl-0646
fgenesh2_kg.1__380__AT1G04480.1
D7KDF3
ARALYDRAFT_470426
33
LLPS-Arl-1215
fgenesh2_kg.1__459__AT1G05150.1
D7KEB8
ARALYDRAFT_470505
34
LLPS-Arl-0661
fgenesh2_kg.1__596__AT5G25230.1
D7KG09
ARALYDRAFT_470642
35
LLPS-Arl-2280
fgenesh2_kg.1__608__AT1G06360.1
D7KG26
ARALYDRAFT_470654
36
LLPS-Arl-0744
fgenesh2_kg.1__649__AT1G06720.1
D7KG60
ARALYDRAFT_470695
37
LLPS-Arl-0689
fgenesh2_kg.1__1413__AT1G13060.1
D7KPF3
ARALYDRAFT_471459
38
LLPS-Arl-2055
fgenesh2_kg.1__1423__AT1G13160.1
D7KQC5
ARALYDRAFT_471469
39
LLPS-Arl-0778
fgenesh2_kg.1__1486__AT1G13730.1
D7KQJ1
ARALYDRAFT_471532
40
LLPS-Arl-0637
fgenesh2_kg.1__1593__AT1G14610.1
D7KBM5
ARALYDRAFT_471639
41
LLPS-Arl-1455
fgenesh2_kg.1__1656__AT1G15130.1
D7KCN2
ARALYDRAFT_471702
42
LLPS-Arl-1147
fgenesh2_kg.1__1702__AT1G15470.1
D7KDG3
ARALYDRAFT_471748
43
LLPS-Arl-2536
fgenesh2_kg.1__2204__AT1G20200.1
D7KIA4
ARALYDRAFT_472250
44
LLPS-Arl-1098
fgenesh2_kg.1__2210__AT1G20260.2
D7KIA8
ARALYDRAFT_472256
45
LLPS-Arl-1110
fgenesh2_kg.1__2760__AT1G26110.1
D7KQT8
ARALYDRAFT_472806
46
LLPS-Arl-1525
fgenesh2_kg.1__2897__AT1G27400.1
D7KBP8
ARALYDRAFT_472943
47
LLPS-Arl-0436
fgenesh2_kg.1__2923__AT1G27650.1
D7KBT2
ARALYDRAFT_472969
48
LLPS-Arl-2772
fgenesh2_kg.1__2937__AT1G27760.3
D7KBU6
ARALYDRAFT_472983
49
LLPS-Arl-2588
fgenesh2_kg.1__2952__AT1G27970.1
D7KBV8
ARALYDRAFT_472998
50
LLPS-Arl-0081
fgenesh2_kg.1__3151__AT1G29880.1
D7KEM8
ARALYDRAFT_473197
51
LLPS-Arl-1605
fgenesh2_kg.1__3230__AT1G30480.1
D7KFK3
ARALYDRAFT_473276
52
LLPS-Arl-1597
fgenesh2_kg.1__3270__AT1G30820.1
D7KFQ2
ARALYDRAFT_473316
53
LLPS-Arl-0356
fgenesh2_kg.1__3446__AT1G33140.1
D7KIG0
ARALYDRAFT_473492
54
LLPS-Arl-1183
fgenesh2_kg.1__3466__AT1G33390.1
D7KII3
ARALYDRAFT_473512
55
LLPS-Arl-2709
fgenesh2_kg.1__3801__AT1G45231.2
D7KPT9
ARALYDRAFT_473847
56
LLPS-Arl-0509
fgenesh2_kg.1__3824__AT1G47220.1
D7KAP9
ARALYDRAFT_473870
57
LLPS-Arl-0024
fgenesh2_kg.1__3828__AT1G47250.1
D7KAQ3
ARALYDRAFT_473874
58
LLPS-Arl-0946
fgenesh2_kg.1__3931__AT1G48410.2
D7KD09
ARALYDRAFT_473977
59
LLPS-Arl-2107
fgenesh2_kg.1__4049__AT1G49600.1
D7KEZ1
ARALYDRAFT_474095
60
LLPS-Arl-2758
fgenesh2_kg.1__4094__AT1G50030.1
D7KFU9
ARALYDRAFT_474140
61
LLPS-Arl-1919
fgenesh2_kg.1__4106__AT1G50200.1
D7KFW7
ARALYDRAFT_474152
62
LLPS-Arl-2598
fgenesh2_kg.1__4442__AT1G53570.2
D7KKJ6
ARALYDRAFT_474488
63
LLPS-Arl-1898
fgenesh2_kg.1__4492__AT1G54080.1
D7KLE3
ARALYDRAFT_474538
64
LLPS-Arl-1018
fgenesh2_kg.1__4564__AT1G55520.2
D7KMA2
ARALYDRAFT_474610
65
LLPS-Arl-1146
fgenesh2_kg.1__4615__AT1G55915.1
D7KN38
ARALYDRAFT_474661
66
LLPS-Arl-1438
fgenesh2_kg.2__355__AT1G61010.3
D7KW60
ARALYDRAFT_475225
67
LLPS-Arl-0835
fgenesh2_kg.2__371__AT1G60900.1
D7KW76
ARALYDRAFT_475241
68
LLPS-Arl-0255
fgenesh2_kg.2__376__AT1G60850.1
D7KWN9
ARALYDRAFT_475246
69
LLPS-Arl-2489
fgenesh2_kg.2__506__AT1G58684.1
D7KXW4
ARALYDRAFT_475376
70
LLPS-Arl-2002
fgenesh2_kg.2__1001__AT1G67680.1
D7KVM9
ARALYDRAFT_475871
71
LLPS-Arl-0122
fgenesh2_kg.2__1237__AT1G66580.1
D7KXI8
ARALYDRAFT_476107
72
LLPS-Arl-1744
fgenesh2_kg.2__1252__AT1G69960.1
D7KXL2
ARALYDRAFT_476122
73
LLPS-Arl-2375
fgenesh2_kg.2__1493__AT1G72340.1
D7KZC5
ARALYDRAFT_476363
74
LLPS-Arl-1461
fgenesh2_kg.2__1695__AT1G74310.1
D7KS08
ARALYDRAFT_476565
75
LLPS-Arl-0673
fgenesh2_kg.2__2024__AT1G77300.1
D7KUH8
ARALYDRAFT_476894
76
LLPS-Arl-0999
fgenesh2_kg.2__2185__AT1G78900.1
D7KVW2
ARALYDRAFT_477055
77
LLPS-Arl-0621
fgenesh2_kg.2__2199__AT1G79000.1
D7KVX3
ARALYDRAFT_477069
78
LLPS-Arl-0419
fgenesh2_kg.2__2310__AT1G80670.1
D7KX32
ARALYDRAFT_477180
79
LLPS-Arl-0199
fgenesh2_kg.2__2381__AT1G80070.1
D7KX96
ARALYDRAFT_477251
80
LLPS-Arl-0177
fgenesh2_kg.2__2428__AT1G79730.1
D7KXQ1
ARALYDRAFT_477298
81
LLPS-Arl-0660
fgenesh2_kg.3__551__AT3G05590.1
D7L3W4
ARALYDRAFT_477850
82
LLPS-Arl-2198
fgenesh2_kg.3__629__AT3G06290.1
D7L5F1
ARALYDRAFT_477928
83
LLPS-Arl-1579
fgenesh2_kg.3__687__AT3G06720.1
D7L5Z0
ARALYDRAFT_477986
84
LLPS-Arl-1470
fgenesh2_kg.3__725__AT3G07050.1
D7L626
ARALYDRAFT_478024
85
LLPS-Arl-1977
fgenesh2_kg.3__752__AT3G07300.2
D7L6J0
ARALYDRAFT_478051
86
LLPS-Arl-0354
fgenesh2_kg.3__876__AT3G08720.1
D7L772
ARALYDRAFT_478175
87
LLPS-Arl-0864
fgenesh2_kg.3__904__AT3G08950.1
D7L7P7
ARALYDRAFT_478203
88
LLPS-Arl-1613
fgenesh2_kg.3__1217__AT3G11710.1
D7LAQ8
ARALYDRAFT_478516
89
LLPS-Arl-0001
fgenesh2_kg.3__1249__AT3G11964.1
D7KZM8
ARALYDRAFT_478548
90
LLPS-Arl-1150
fgenesh2_kg.3__1257__AT3G12040.1
D7KZN6
ARALYDRAFT_478556
91
LLPS-Arl-0273
fgenesh2_kg.3__1291__AT3G12280.1
D7KZR3
ARALYDRAFT_478590
92
LLPS-Arl-0796
fgenesh2_kg.3__1547__AT3G14290.1
D7L330
ARALYDRAFT_478846
93
LLPS-Arl-2940
fgenesh2_kg.3__2158__AT3G19390.1
D7L9Y8
ARALYDRAFT_479457
94
LLPS-Arl-0644
fgenesh2_kg.3__2356__AT3G21350.1
D7L0R7
ARALYDRAFT_479655
95
LLPS-Arl-0269
fgenesh2_kg.3__2374__AT3G21540.1
D7L0U0
ARALYDRAFT_479673
96
LLPS-Arl-1082
fgenesh2_kg.3__2427__AT3G22110.1
D7L1K6
ARALYDRAFT_479726
97
LLPS-Arl-2384
fgenesh2_kg.3__2468__AT3G22480.2
D7L1Q5
ARALYDRAFT_479767
98
LLPS-Arl-1347
fgenesh2_kg.3__2555__AT3G23390.1
D7L3B4
ARALYDRAFT_479854
99
LLPS-Arl-0607
fgenesh2_kg.3__2568__AT3G23580.1
D7L3C8
ARALYDRAFT_479867
100
LLPS-Arl-0772
fgenesh2_kg.3__2805__AT2G04740.1
D7L848
ARALYDRAFT_480104
101
LLPS-Arl-1786
fgenesh2_kg.3__2832__AT2G05170.1
D7L8M8
ARALYDRAFT_480131
102
LLPS-Arl-2824
fgenesh2_kg.3__2886__AT2G05630.1
D7L990
ARALYDRAFT_480185
103
LLPS-Arl-1527
fgenesh2_kg.3__2920__AT2G06210.1
D7LA62
ARALYDRAFT_480219
104
LLPS-Arl-0158
fgenesh2_kg.3__2941__AT2G07690.1
D7LB22
ARALYDRAFT_480240
105
LLPS-Arl-1266
fgenesh2_kg.3__3007__AT2G13370.1
D7L024
ARALYDRAFT_480306
106
LLPS-Arl-0631
fgenesh2_kg.3__3010__AT2G13540.1
D7L031
ARALYDRAFT_480309
107
LLPS-Arl-2417
fgenesh2_kg.3__3195__AT2G19750.1
D7L6H2
ARALYDRAFT_480494
108
LLPS-Arl-0097
fgenesh2_kg.3__3337__AT2G17510.1
D7L9F1
ARALYDRAFT_480636
109
LLPS-Arl-1567
fgenesh2_kg.3__3408__AT2G18040.1
D7LAE8
ARALYDRAFT_480707
110
LLPS-Arl-1060
fgenesh2_kg.3__3577__AT2G20490.1
D7L3P0
ARALYDRAFT_480876
111
LLPS-Arl-1422
fgenesh2_kg.4__104__AT2G21790.1
D7LBY7
ARALYDRAFT_481044
112
LLPS-Arl-0860
fgenesh2_kg.4__501__AT3G24350.1
D7LC05
ARALYDRAFT_481441
113
LLPS-Arl-1737
fgenesh2_kg.4__675__AT2G27200.1
D7LGU4
ARALYDRAFT_481615
114
LLPS-Arl-0365
fgenesh2_kg.4__687__AT2G27285.1
D7LGV5
ARALYDRAFT_481627
115
LLPS-Arl-1174
fgenesh2_kg.4__726__AT2G28390.1
D7LHM9
ARALYDRAFT_481666
116
LLPS-Arl-2110
fgenesh2_kg.4__813__AT2G27600.1
D7LJ25
ARALYDRAFT_481753
117
LLPS-Arl-1385
fgenesh2_kg.4__1104__AT2G31170.1
D7LCZ9
ARALYDRAFT_482044
118
LLPS-Arl-1380
fgenesh2_kg.4__1148__AT2G31610.1
D7LDM7
ARALYDRAFT_482088
119
LLPS-Arl-1051
fgenesh2_kg.4__1190__AT2G32000.1
D7LEC3
ARALYDRAFT_482130
120
LLPS-Arl-1062
fgenesh2_kg.4__1424__AT2G34210.1
D7LGY4
ARALYDRAFT_482364
121
LLPS-Arl-0949
fgenesh2_kg.4__1470__AT2G34480.1
D7LH11
ARALYDRAFT_482410
122
LLPS-Arl-1742
fgenesh2_kg.4__1521__AT2G34970.1
D7LHR0
ARALYDRAFT_482461
123
LLPS-Arl-2080
fgenesh2_kg.4__1685__AT2G36460.1
D7LJ40
ARALYDRAFT_482625
124
LLPS-Arl-0694
fgenesh2_kg.4__1865__AT2G37990.1
D7LKR9
ARALYDRAFT_482805
125
LLPS-Arl-2012
fgenesh2_kg.4__2064__AT2G39770.1
D7LDR8
ARALYDRAFT_483004
126
LLPS-Arl-1846
fgenesh2_kg.624__1__AT2G39990.1
D7LDU9
ARALYDRAFT_483038
127
LLPS-Arl-2653
fgenesh2_kg.4__2101__AT2G40010.1
D7LEE5
ARALYDRAFT_483041
128
LLPS-Arl-0526
fgenesh2_kg.4__2141__AT2G40290.1
D7LF24
ARALYDRAFT_483081
129
LLPS-Arl-0080
fgenesh2_kg.4__2150__AT2G40360.1
D7LF32
ARALYDRAFT_483090
130
LLPS-Arl-1136
fgenesh2_kg.4__2229__AT2G41020.1
D7LGI5
ARALYDRAFT_483169
131
LLPS-Arl-2939
fgenesh2_kg.4__2536__AT2G43640.1
D7LKG6
ARALYDRAFT_483476
132
LLPS-Arl-0565
fgenesh2_kg.4__2659__AT2G44680.1
D7LLP6
ARALYDRAFT_483599
133
LLPS-Arl-1367
fgenesh2_kg.4__2758__AT2G45620.1
D7LCL1
ARALYDRAFT_483698
134
LLPS-Arl-0828
fgenesh2_kg.4__2779__AT2G45810.1
D7LD91
ARALYDRAFT_483719
135
LLPS-Arl-0947
fgenesh2_kg.4__2966__AT2G47300.2
D7LGL6
ARALYDRAFT_483906
136
LLPS-Arl-0914
fgenesh2_kg.5__72__AT2G01650.1
D7LLU4
ARALYDRAFT_484080
137
LLPS-Arl-2537
fgenesh2_kg.5__119__AT2G02040.1
D7LPY9
ARALYDRAFT_484127
138
LLPS-Arl-1544
fgenesh2_kg.5__299__AT2G04032.1
D7LQP1
ARALYDRAFT_484307
139
LLPS-Arl-0746
fgenesh2_kg.5__492__AT3G27170.1
D7LLW8
ARALYDRAFT_484500
140
LLPS-Arl-1065
fgenesh2_kg.5__675__AT3G29160.2
D7LNU4
ARALYDRAFT_484683
141
LLPS-Arl-1891
fgenesh2_kg.5__811__AT3G43810.1
D7LMD4
ARALYDRAFT_484819
142
LLPS-Arl-1464
fgenesh2_kg.5__1221__AT3G48750.1
D7LS07
ARALYDRAFT_485229
143
LLPS-Arl-2861
fgenesh2_kg.5__1316__AT3G49660.1
D7LSL5
ARALYDRAFT_485324
144
LLPS-Arl-1484
fgenesh2_kg.5__1350__AT3G50000.1
D7LT11
ARALYDRAFT_485358
145
LLPS-Arl-0478
fgenesh2_kg.5__1406__AT3G50670.1
D7LTH2
ARALYDRAFT_485414
146
LLPS-Arl-0287
fgenesh2_kg.5__1469__AT3G51250.1
D7LTS7
ARALYDRAFT_485477
147
LLPS-Arl-0188
fgenesh2_kg.5__1690__AT3G53230.1
D7LUF9
ARALYDRAFT_485698
148
LLPS-Arl-1069
fgenesh2_kg.5__1855__AT3G54610.1
D7LUV9
ARALYDRAFT_485863
149
LLPS-Arl-0217
fgenesh2_kg.5__1932__AT3G55170.2
D7LV16
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LLPS-Arl-0747
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LLPS-Arl-1522
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LLPS-Arl-0059
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LLPS-Arl-0715
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LLPS-Arl-1513
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LLPS-Arl-0241
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LLPS-Arl-1102
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LLPS-Arl-0468
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LLPS-Arl-1185
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LLPS-Arl-0488
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LLPS-Arl-0680
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LLPS-Arl-1954
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LLPS-Arl-2529
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LLPS-Arl-1916
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LLPS-Arl-0304
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AVA-P2
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LLPS-Arl-1128
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D7MN19
CBP20
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LLPS-Arl-2161
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D7LIG8
CKS2
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LLPS-Arl-0737
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ECA1
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LLPS-Arl-0556
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LLPS-Arl-0852
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LLPS-Arl-0879
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FEN1
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LLPS-Arl-1776
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G6PD6
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LLPS-Arl-0799
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LLPS-Arl-0904
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LLPS-Arl-0638
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D7M457
MCM7
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LLPS-Arl-0756
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NSF
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LLPS-Arl-0463
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PFK
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LLPS-Arl-1946
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PIE1
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LLPS-Arl-0088
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RPT1A
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LLPS-Arl-0400
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LLPS-Arl-1267
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SAE2
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LLPS-Arl-0486
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LLPS-Arl-0079
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D7LDY2
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LLPS-Arl-2592
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D7LYZ1
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LLPS-Arl-2064
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LLPS-Arl-0219
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LLPS-Arl-0971
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