Xiphophorus maculatus      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 87 genes.  Reviewed (0 or Unreviewed (87

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Xim-0002
ENSXMAG00000003753.2
M3ZNI2
2
LLPS-Xim-0005
ENSXMAG00000018792.2
M4AWN6
3
LLPS-Xim-0025
ENSXMAG00000009677.2
A0A3B5R029
4
LLPS-Xim-0059
ENSXMAG00000019151.2
A0A3B5R9K6
5
LLPS-Xim-0135
ENSXMAG00000003437.2
M3ZMK0
6
LLPS-Xim-0138
ENSXMAG00000000039.2
A0A3B5PRQ0
7
LLPS-Xim-0161
ENSXMAG00000011842.2
A0A3B5QKW5
8
LLPS-Xim-0171
ENSXMAG00000017701.2
M4ATF7
9
LLPS-Xim-0179
ENSXMAG00000014141.2
A0A3B5QDY8
10
LLPS-Xim-0207
ENSXMAG00000023528.1
A0A3B5PSL5
11
LLPS-Xim-0226
ENSXMAG00000006069.2
M3ZV48
12
LLPS-Xim-0349
ENSXMAG00000000396.2
M3ZDV3
13
LLPS-Xim-0357
ENSXMAG00000008522.2
A0A3B5QE15
14
LLPS-Xim-0360
ENSXMAG00000002511.2
M3ZJY7
15
LLPS-Xim-0468
ENSXMAG00000010853.2
M4A8T7
16
LLPS-Xim-0490
ENSXMAG00000002593.2
M3ZK58
17
LLPS-Xim-0500
ENSXMAG00000013524.2
A0A3B5R7C0
18
LLPS-Xim-0525
ENSXMAG00000014898.2
M4AKH7
19
LLPS-Xim-0572
ENSXMAG00000012882.2
A0A3B5Q5A3
20
LLPS-Xim-0732
ENSXMAG00000015925.2
M4ANC5
21
LLPS-Xim-0808
ENSXMAG00000005440.2
M3ZTE5
22
LLPS-Xim-0881
ENSXMAG00000019336.2
M4AY37
23
LLPS-Xim-0975
ENSXMAG00000004985.2
M3ZRZ3
24
LLPS-Xim-1048
ENSXMAG00000016713.2
M4AQK6
25
LLPS-Xim-1081
ENSXMAG00000012546.2
A0A3B5Q6Y2
26
LLPS-Xim-1093
ENSXMAG00000013547.2
M4AGK8
27
LLPS-Xim-1138
ENSXMAG00000023539.1
A0A3B5PRJ4
28
LLPS-Xim-1229
ENSXMAG00000007090.2
M3ZY09
29
LLPS-Xim-1246
ENSXMAG00000010836.2
A0A3B5PZ68
30
LLPS-Xim-1287
ENSXMAG00000015687.2
M4AMP3
31
LLPS-Xim-1401
ENSXMAG00000004307.2
M3ZQ60
32
LLPS-Xim-1427
ENSXMAG00000012282.2
A0A3B5R4U7
33
LLPS-Xim-1551
ENSXMAG00000007377.2
M3ZYW0
34
LLPS-Xim-1559
ENSXMAG00000017876.2
M4ATX9
35
LLPS-Xim-1628
ENSXMAG00000010451.2
M4A7N7
36
LLPS-Xim-1630
ENSXMAG00000028666.1
M3ZRD7
37
LLPS-Xim-1672
ENSXMAG00000026757.1
A0A3B5QRF3
38
LLPS-Xim-1682
ENSXMAG00000007623.2
M3ZZL0
39
LLPS-Xim-1721
ENSXMAG00000017366.2
A0A3B5R5R7
40
LLPS-Xim-1781
ENSXMAG00000006766.2
M3ZX50
41
LLPS-Xim-1813
ENSXMAG00000024335.1
A0A3B5R2K7
42
LLPS-Xim-1865
ENSXMAG00000008323.2
M4A1L6
43
LLPS-Xim-1903
ENSXMAG00000004959.2
M3ZRX6
44
LLPS-Xim-1986
ENSXMAG00000016090.2
A0A3B5Q5T5
45
LLPS-Xim-2011
ENSXMAG00000007316.2
A0A3B5QQX8
46
LLPS-Xim-2054
ENSXMAG00000002128.2
A0A3B5RFG2
47
LLPS-Xim-2067
ENSXMAG00000013527.2
M4AGG7
48
LLPS-Xim-2125
ENSXMAG00000010683.2
M4A8C5
49
LLPS-Xim-2135
ENSXMAG00000027915.1
A0A3B5Q5N7
50
LLPS-Xim-2217
ENSXMAG00000024608.1
A0A3B5QF04
51
LLPS-Xim-2400
ENSXMAG00000022975.1
A0A3B5QKF7
52
LLPS-Xim-2416
ENSXMAG00000028057.1
A0A3B5QRL7
53
LLPS-Xim-2543
ENSXMAG00000007353.2
A0A3B5R002
54
LLPS-Xim-2659
ENSXMAG00000003481.2
A0A3B5Q6U1
55
LLPS-Xim-2729
ENSXMAG00000001707.2
M3ZHM0
56
LLPS-Xim-2778
ENSXMAG00000008347.2
M4A1M9
57
LLPS-Xim-2786
ENSXMAG00000011153.2
M4A9N9
58
LLPS-Xim-2806
ENSXMAG00000004665.2
M3ZRE7
59
LLPS-Xim-2850
ENSXMAG00000022050.1
A0A3B5PWU7
60
LLPS-Xim-2912
ENSXMAG00000009720.2
M4A5K5
61
LLPS-Xim-3255
ENSXMAG00000003838.2
M3ZNQ8
62
LLPS-Xim-3279
ENSXMAG00000003247.2
M3ZM12
63
LLPS-Xim-3287
ENSXMAG00000014963.2
M4AKJ2
64
LLPS-Xim-3363
ENSXMAG00000008513.2
M4A247
65
LLPS-Xim-3380
ENSXMAG00000018135.2
M4AUN8
66
LLPS-Xim-3433
ENSXMAG00000011173.2
M4A9Q8
67
LLPS-Xim-3447
ENSXMAG00000009357.2
M4A4I4
68
LLPS-Xim-3558
ENSXMAG00000000827.2
M3ZF41
69
LLPS-Xim-3566
ENSXMAG00000027746.1
A0A3B5QEA1
70
LLPS-Xim-3589
ENSXMAG00000011345.2
M4AA79
71
LLPS-Xim-3593
ENSXMAG00000027769.1
A0A3B5Q8W3
72
LLPS-Xim-3646
ENSXMAG00000025560.1
A0A3B5PUF5
73
LLPS-Xim-3662
ENSXMAG00000029896.1
A0A3B5QBG3
74
LLPS-Xim-3818
ENSXMAG00000006763.2
M3ZX48
75
LLPS-Xim-3903
ENSXMAG00000006810.2
M3ZXF9
76
LLPS-Xim-4072
ENSXMAG00000017725.2
M4ATI0
77
LLPS-Xim-4171
ENSXMAG00000013851.2
M4AHG6
78
LLPS-Xim-0827
ENSXMAG00000000787.2
M3ZF21
AGO2
79
LLPS-Xim-0690
ENSXMAG00000021412.1
A0A3B5RDI6
AK2
80
LLPS-Xim-3291
ENSXMAG00000007687.2
M4A001
FLNB
81
LLPS-Xim-2899
ENSXMAG00000002316.2
M3ZJC4
GAR1
82
LLPS-Xim-1391
ENSXMAG00000029150.1
A0A3B5QVQ1
HNRNPA0 (1 of many)
83
LLPS-Xim-1668
ENSXMAG00000026672.1
A0A3B5QNL6
LSM4
84
LLPS-Xim-0153
ENSXMAG00000005154.2
M3ZSH7
NUP62
85
LLPS-Xim-1142
ENSXMAG00000012832.2
A0A3B5PST5
PLK1
86
LLPS-Xim-1204
ENSXMAG00000004091.2
M3ZPG6
RPL5 (1 of many)
87
LLPS-Xim-1735
ENSXMAG00000015716.2
Q92143
tp53