Ustilago maydis      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 34 genes.  Reviewed (0 or Unreviewed (34

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Usm-0321
UMAG_02088
Q4PCS5
ADK1
2
LLPS-Usm-0909
UMAG_04573
Q4P5P0
GAR1
3
LLPS-Usm-0692
UMAG_04446
A0A0D1DSM6
LSM4
4
LLPS-Usm-1241
UMAG_01230
Q4PF83
NTE1
5
LLPS-Usm-0436
UMAG_03494
Q4P8R9
PAB1
6
LLPS-Usm-0900
UMAG_00157
A0A0D1E735
UMAG_00157
7
LLPS-Usm-1266
UMAG_00923
A0A0D1E9E7
UMAG_00923
8
LLPS-Usm-1540
UMAG_01182
A0A0D1CDX8
UMAG_01182
9
LLPS-Usm-0017
UMAG_02375
A0A0D1C8U4
UMAG_02375
10
LLPS-Usm-0065
UMAG_02859
A0A0D1C5C8
UMAG_02859
11
LLPS-Usm-0114
UMAG_02881
A0A0D1E2U6
UMAG_02881
12
LLPS-Usm-1151
UMAG_03216
A0A0D1C4S6
UMAG_03216
13
LLPS-Usm-0705
UMAG_03234
A0A0D1CPW7
UMAG_03234
14
LLPS-Usm-0661
UMAG_03687
A0A0D1CN91
UMAG_03687
15
LLPS-Usm-0139
UMAG_03863
A0A0D1C3I0
UMAG_03863
16
LLPS-Usm-0493
UMAG_03967
A0A0D1DW69
UMAG_03967
17
LLPS-Usm-1106
UMAG_04375
A0A0D1CKA2
UMAG_04375
18
LLPS-Usm-0506
UMAG_04397
A0A0D1CKD6
UMAG_04397
19
LLPS-Usm-0223
UMAG_04509
A0A0D1DY11
UMAG_04509
20
LLPS-Usm-1433
UMAG_04835
A0A0D1CIH4
UMAG_04835
21
LLPS-Usm-0795
UMAG_04950
A0A0D1BZG3
UMAG_04950
22
LLPS-Usm-0237
UMAG_05158
A0A0D1E6S7
UMAG_05158
23
LLPS-Usm-0640
UMAG_05998
A0A0D1DN50
UMAG_05998
24
LLPS-Usm-1517
UMAG_06013
A0A0D1DTJ9
UMAG_06013
25
LLPS-Usm-0195
UMAG_10119
A0A0D1E894
UMAG_10119
26
LLPS-Usm-0652
UMAG_10524
A0A0D1DU52
UMAG_10524
27
LLPS-Usm-0484
UMAG_10588
A0A0D1CXH6
UMAG_10588
28
LLPS-Usm-0540
UMAG_10655
A0A0D1CQ54
UMAG_10655
29
LLPS-Usm-1351
UMAG_11293
A0A0D1DU39
UMAG_11293
30
LLPS-Usm-0835
UMAG_11536
A0A0D1DYE5
UMAG_11536
31
LLPS-Usm-0935
UMAG_11602
A0A0D1CG84
UMAG_11602
32
LLPS-Usm-0754
UMAG_11677
A0A0D1CAE8
UMAG_11677
33
LLPS-Usm-0329
UMAG_11962
A0A0D1DWY2
UMAG_11962
34
LLPS-Usm-0358
UMAG_12199
A0A0D1DXX7
UMAG_12199