Saccharomyces cerevisiae      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 37 genes.  Reviewed (26 or Unreviewed (11

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Sac-0328
YCR088W
P15891
ABP1
2
LLPS-Sac-0495
YDR226W
P07170
ADK1
3
LLPS-Sac-0760
YPR185W
Q06628
ATG13
4
LLPS-Sac-0389
YAL038W
P00549
CDC19
5
LLPS-Sac-0053
YMR001C
P32562
CDC5
6
LLPS-Sac-0395
YGR218W
P30822
CRM1
7
LLPS-Sac-0210
YNL118C
P53550
DCP2
8
LLPS-Sac-0503
YDL160C
P39517
DHH1
9
LLPS-Sac-0656
YEL015W
P39998
EDC3
10
LLPS-Sac-0322
YHR089C
P28007
GAR1
11
LLPS-Sac-1724
YLR293C
P32835
GSP1
12
LLPS-Sac-0080
YER112W
P40070
LSM4
13
LLPS-Sac-0267
YJL041W
P14907
NSP1
14
LLPS-Sac-0599
YKL068W
Q02629
NUP100
15
LLPS-Sac-0617
YMR047C
Q02630
NUP116
16
LLPS-Sac-0254
YER165W
P04147
PAB1
17
LLPS-Sac-0330
YCR077C
P25644
PAT1
18
LLPS-Sac-0015
YGR178C
P53297
PBP1
19
LLPS-Sac-0524
YNL016W
P32588
PUB1
20
LLPS-Sac-0230
YFL033C
P43565
RIM15
21
LLPS-Sac-0013
YDL140C
P04050
RPO21
22
LLPS-Sac-0308
YDR477W
P06782
SNF1
23
LLPS-Sac-0410
YDR172W
P05453
SUP35
24
LLPS-Sac-0420
YGL049C
P39936
TIF4632
25
LLPS-Sac-0696
YJR066W
P35169
TOR1
26
LLPS-Sac-0631
YNL197C
P34761
WHI3
27
LLPS-Sac-0966
YMR276W
P48510
DSK2
28
LLPS-Sac-0911
YNL280C
P32462
ERG24
29
LLPS-Sac-0061
YBR017C
P38217
KAP104
30
LLPS-Sac-0940
YLR347C
Q06142
KAP95
31
LLPS-Sac-0892
YDL108W
P06242
KIN28
32
LLPS-Sac-1115
YGL092W
P49687
NUP145
33
LLPS-Sac-1276
YLR044C
P06169
PDC1
34
LLPS-Sac-1073
YMR308C
P32337
PSE1
35
LLPS-Sac-1310
YGL044C
P25299
RNA15
36
LLPS-Sac-0960
YOL127W
P04456
RPL25
37
LLPS-Sac-1185
YPL131W
P26321
RPL5