Rattus norvegicus      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 113 genes.  Reviewed (12 or Unreviewed (101

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Ran-0017
ENSRNOG00000001256.8
F1M049
Atxn2
2
LLPS-Ran-0043
ENSRNOG00000018526.7
P31016
Dlg4
3
LLPS-Ran-0041
ENSRNOG00000057464.1
Q80WE1
Fmr1
4
LLPS-Ran-0004
ENSRNOG00000011175.8
A7VJC2
Hnrnpa2b1
5
LLPS-Ran-4900
ENSRNOG00000047014.3
Q9Z214-3
Homer1
6
LLPS-Ran-4900
ENSRNOG00000047014.3
Q9Z214-3
Homer1
7
LLPS-Ran-0034
ENSRNOG00000008639.7
Q9EPH8
Pabpc1
8
LLPS-Ran-0047
ENSRNOG00000020782.7
Q4KLH4
Pspc1
9
LLPS-Ran-0039
ENSRNOG00000045568.3
M0R9Q1
Rbm14
10
LLPS-Ran-0028
ENSRNOG00000000483.8
Q9QUH6
Syngap1
11
LLPS-Ran-0013
ENSRNOG00000016813.7
Q5PQR7
Tia1
12
LLPS-Ran-1862
ENSRNOG00000006975.6
O08816
Wasl
13
LLPS-Ran-0705
ENSRNOG00000052574.1
A0A0G2JU83
14
LLPS-Ran-3234
ENSRNOG00000046657.1
M0R497
15
LLPS-Ran-3550
ENSRNOG00000038905.4
E9PSU5
16
LLPS-Ran-4314
ENSRNOG00000009478.6
Q66HC3
17
LLPS-Ran-1814
ENSRNOG00000008533.4
Q9QZ81
Ago2
18
LLPS-Ran-2593
ENSRNOG00000000122.4
P29410
Ak2
19
LLPS-Ran-0691
ENSRNOG00000006997.8
P08592
App
20
LLPS-Ran-0522
ENSRNOG00000018686.7
A0A0G2JYE0
Atxn2l
21
LLPS-Ran-0231
ENSRNOG00000004479.7
P59241
Aurka
22
LLPS-Ran-2157
ENSRNOG00000005659.6
O55099
Aurkb
23
LLPS-Ran-3264
ENSRNOG00000009783.8
P11730
Camk2g
24
LLPS-Ran-2093
ENSRNOG00000008689.8
D4A3T3
Cbx1
25
LLPS-Ran-3871
ENSRNOG00000049215.1
M0RE14
Cbx2
26
LLPS-Ran-1128
ENSRNOG00000036841.3
B2RYU7
Cbx5
27
LLPS-Ran-0193
ENSRNOG00000018510.8
P51952
Cdk7
28
LLPS-Ran-2442
ENSRNOG00000022586.4
Q641Z4
Cdk9
29
LLPS-Ran-3628
ENSRNOG00000015999.6
P60825
Cirbp
30
LLPS-Ran-4455
ENSRNOG00000005043.7
A0A0G2K520
Cpeb2
31
LLPS-Ran-0052
ENSRNOG00000048025.2
A0A0G2K6F9
Cstf2
32
LLPS-Ran-3703
ENSRNOG00000050289.2
M0R6B9
Cstf2t
33
LLPS-Ran-3421
ENSRNOG00000047280.3
Q66HL2
Cttn
34
LLPS-Ran-2321
ENSRNOG00000055226.1
Q6P730
Dab2ip
35
LLPS-Ran-4196
ENSRNOG00000000477.5
Q8VIB2
Daxx
36
LLPS-Ran-1168
ENSRNOG00000031387.4
Q4KLZ3
Dazap1
37
LLPS-Ran-0927
ENSRNOG00000007340.7
D3ZZJ7
Dcp1b
38
LLPS-Ran-1160
ENSRNOG00000045895.3
M0RBQ1
Dcp2
39
LLPS-Ran-0361
ENSRNOG00000023383.6
A0A0G2K719
Ddx3x
40
LLPS-Ran-1550
ENSRNOG00000026686.6
Q64060
Ddx4
41
LLPS-Ran-2109
ENSRNOG00000053932.1
D3ZD73
Ddx6
42
LLPS-Ran-3795
ENSRNOG00000016196.7
P97836
Dlgap1
43
LLPS-Ran-1815
ENSRNOG00000001662.7
Q63470
Dyrk1a
44
LLPS-Ran-2310
ENSRNOG00000019579.7
F1M7Z1
Edc3
45
LLPS-Ran-0220
ENSRNOG00000014368.7
A0A0G2JY73
Eif4g3
46
LLPS-Ran-4263
ENSRNOG00000001469.8
Q99372
Eln
47
LLPS-Ran-2730
ENSRNOG00000008184.8
B2RYD2
Esrp1
48
LLPS-Ran-0538
ENSRNOG00000009437.7
A0A140UHY3
Ewsr1
49
LLPS-Ran-1276
ENSRNOG00000015303.7
D3ZVA5
Fbll1
50
LLPS-Ran-0233
ENSRNOG00000054890.1
C0JPT7
Flna
51
LLPS-Ran-1749
ENSRNOG00000009470.7
A0A0G2JXT8
Flnb
52
LLPS-Ran-0549
ENSRNOG00000023360.4
Q5PQK2
Fus
53
LLPS-Ran-3804
ENSRNOG00000000596.6
Q62844
Fyn
54
LLPS-Ran-0527
ENSRNOG00000061146.2
Q6AYA1
Gar1
55
LLPS-Ran-1705
ENSRNOG00000009430.7
Q4KLJ3
Gnl2
56
LLPS-Ran-2028
ENSRNOG00000003990.6
P62994
Grb2
57
LLPS-Ran-3503
ENSRNOG00000048817.2
A0A096MJE3
Gspt2
58
LLPS-Ran-1271
ENSRNOG00000036839.4
P04256
Hnrnpa1
59
LLPS-Ran-0717
ENSRNOG00000002292.8
Q9JJ54
Hnrnpd
60
LLPS-Ran-3396
ENSRNOG00000002270.7
Q3SWU3
Hnrnpdl
61
LLPS-Ran-4425
ENSRNOG00000003399.8
Q8VHV7
Hnrnph1
62
LLPS-Ran-0748
ENSRNOG00000011661.5
Q6AY09
Hnrnph2
63
LLPS-Ran-0793
ENSRNOG00000048193.2
D4ABK7
Hnrnph3
64
LLPS-Ran-0548
ENSRNOG00000020229.7
Q9Z2X5
Homer3
65
LLPS-Ran-0695
ENSRNOG00000010989.8
D4A781
Ipo5
66
LLPS-Ran-2364
ENSRNOG00000002001.8
Q9WVE9
Itsn1
67
LLPS-Ran-3313
ENSRNOG00000015329.6
Q6P6T9
Kpna2
68
LLPS-Ran-2385
ENSRNOG00000009275.4
P52296
Kpnb1
69
LLPS-Ran-0296
ENSRNOG00000017429.3
O70601
Lat
70
LLPS-Ran-0668
ENSRNOG00000010645.5
P08699
Lgals3
71
LLPS-Ran-1032
ENSRNOG00000055738.1
A0A0G2JXM2
LOC103692976
72
LLPS-Ran-4414
ENSRNOG00000039876.4
F1M3H8
LOC681410
73
LLPS-Ran-0683
ENSRNOG00000019572.5
D4A2C6
Lsm4
74
LLPS-Ran-2999
ENSRNOG00000005825.8
P00697
Lyz1
75
LLPS-Ran-1919
ENSRNOG00000025443.4
Q6XVN8
Map1lc3a
76
LLPS-Ran-2248
ENSRNOG00000038106.2
A0A0G2K9Q7
Map1lc3b2
77
LLPS-Ran-2493
ENSRNOG00000005133.9
P19332
Mapt
78
LLPS-Ran-3781
ENSRNOG00000020730.7
Q501R9
Nbr1
79
LLPS-Ran-4134
ENSRNOG00000014917.7
A0A0G2JUA7
Nck1
80
LLPS-Ran-4001
ENSRNOG00000020873.7
Q9R044
Nphs1
81
LLPS-Ran-0899
ENSRNOG00000004616.8
P13084
Npm1
82
LLPS-Ran-2525
ENSRNOG00000001456.5
P49791
Nup153
83
LLPS-Ran-0327
ENSRNOG00000048733.2
P17955
Nup62
84
LLPS-Ran-0242
ENSRNOG00000020347.7
P49793
Nup98
85
LLPS-Ran-3620
ENSRNOG00000020420.6
P12928
Pklr
86
LLPS-Ran-2070
ENSRNOG00000018815.7
Q62673
Plk1
87
LLPS-Ran-0872
ENSRNOG00000000977.8
M0R715
Pnpla6
88
LLPS-Ran-1043
ENSRNOG00000028834.5
D4A5A6
Polr2a
89
LLPS-Ran-0819
ENSRNOG00000007706.3
Q09137
Prkaa2
90
LLPS-Ran-3771
ENSRNOG00000026109.6
Q63009
Prmt1
91
LLPS-Ran-2782
ENSRNOG00000010448.9
Q00438
Ptbp1
92
LLPS-Ran-1577
ENSRNOG00000009972.7
A0A0G2JW78
Rara
93
LLPS-Ran-3727
ENSRNOG00000002827.7
D3ZSL1
Rbfox1
94
LLPS-Ran-2156
ENSRNOG00000005387.6
Q925G0
Rbm3
95
LLPS-Ran-0783
ENSRNOG00000023344.3
P62752
Rpl23a
96
LLPS-Ran-1562
ENSRNOG00000023529.3
P09895
Rpl5
97
LLPS-Ran-4321
ENSRNOG00000022499.6
D4A624
Sgo1
98
LLPS-Ran-0634
ENSRNOG00000052296.2
Q9JLU4
Shank3
99
LLPS-Ran-4454
ENSRNOG00000007106.7
D4A3T0
Sos1
100
LLPS-Ran-2979
ENSRNOG00000003147.8
O08623
Sqstm1
101
LLPS-Ran-0414
ENSRNOG00000005031.4
Q5BJZ4
Surf6
102
LLPS-Ran-1748
ENSRNOG00000010365.7
P09951
Syn1
103
LLPS-Ran-0976
ENSRNOG00000008157.2
Q63537
Syn2
104
LLPS-Ran-2326
ENSRNOG00000012455.6
I6L9G6
Tardbp
105
LLPS-Ran-0383
ENSRNOG00000020271.5
Q5BJN3
Tial1
106
LLPS-Ran-0484
ENSRNOG00000014999.7
F1LQP9
Tnpo1
107
LLPS-Ran-0232
ENSRNOG00000024907.6
F1LV37
Tnrc6b
108
LLPS-Ran-1850
ENSRNOG00000060728.1
P68370
Tuba1a
109
LLPS-Ran-2286
ENSRNOG00000003099.6
D4AA63
Ubqln2
110
LLPS-Ran-0637
ENSRNOG00000048509.2
A0A0G2K012
Ubxn6
111
LLPS-Ran-3336
ENSRNOG00000015109.5
D3ZUE3
Ubxn8
112
LLPS-Ran-2010
ENSRNOG00000009935.5
Q80U96
Xpo1
113
LLPS-Ran-1220
ENSRNOG00000000236.7
Q498C9
Zfp207