Oryza indica      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 36 genes.  Reviewed (0 or Unreviewed (36

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Ori-0634
BGIOSGA019809
A2Y4B6
CDKD-1
2
LLPS-Ori-0181
BGIOSGA001965
B8ABU5
LSM4
3
LLPS-Ori-1076
BGIOSGA012620
A2XGQ1
NUG2
4
LLPS-Ori-0419
BGIOSGA002219
A2WLL4
OsI_00731
5
LLPS-Ori-0087
BGIOSGA003469
A2WPN6
OsI_01816
6
LLPS-Ori-0163
BGIOSGA004977
B8A7P8
OsI_04778
7
LLPS-Ori-0196
BGIOSGA006472
B8AHX0
OsI_07219
8
LLPS-Ori-1277
BGIOSGA008699
B8AFZ8
OsI_08237
9
LLPS-Ori-0121
BGIOSGA005404
B8AEF3
OsI_09350
10
LLPS-Ori-0251
BGIOSGA009310
A2XB50
OsI_09490
11
LLPS-Ori-0062
BGIOSGA011957
A2XD20
OsI_10206
12
LLPS-Ori-1708
BGIOSGA010048
B8APJ2
OsI_13038
13
LLPS-Ori-0042
BGIOSGA013396
B8AQ13
OsI_13167
14
LLPS-Ori-0600
BGIOSGA009403
B8ANT2
OsI_14416
15
LLPS-Ori-0967
BGIOSGA016029
B8ARK4
OsI_15137
16
LLPS-Ori-0265
BGIOSGA014088
A2XYZ3
OsI_17926
17
LLPS-Ori-1273
BGIOSGA017411
B8ARW2
OsI_18044
18
LLPS-Ori-0329
BGIOSGA019672
A2Y3K8
OsI_19590
19
LLPS-Ori-1974
BGIOSGA038476
A2Y5M0
OsI_20291
20
LLPS-Ori-0641
BGIOSGA017681
B8B075
OsI_20733
21
LLPS-Ori-0528
BGIOSGA023217
A2YER4
OsI_23609
22
LLPS-Ori-0063
BGIOSGA025460
A2YJX0
OsI_25526
23
LLPS-Ori-0301
BGIOSGA026134
B8B8K2
OsI_26865
24
LLPS-Ori-1457
BGIOSGA027630
B8BAW1
OsI_27866
25
LLPS-Ori-0915
BGIOSGA028303
A2YT00
OsI_28451
26
LLPS-Ori-0250
BGIOSGA030226
A2YYH2
OsI_30396
27
LLPS-Ori-0167
BGIOSGA029795
A2Z129
OsI_31301
28
LLPS-Ori-1972
BGIOSGA029268
B8BEN3
OsI_32390
29
LLPS-Ori-2415
BGIOSGA034736
B8BIX4
OsI_34981
30
LLPS-Ori-1311
BGIOSGA034839
B8BJ73
OsI_35185
31
LLPS-Ori-0534
BGIOSGA034909
B8BJE1
OsI_35315
32
LLPS-Ori-1133
BGIOSGA034093
A2ZDQ6
OsI_35920
33
LLPS-Ori-0056
BGIOSGA035498
A2ZFN5
OsI_36586
34
LLPS-Ori-1240
BGIOSGA033615
B8BLL8
OsI_36864
35
LLPS-Ori-1101
BGIOSGA037053
B8BNC7
OsI_37599
36
LLPS-Ori-1070
BGIOSGA035909
A2ZM95
OsI_38948