Ficedula albicollis      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 81 genes.  Reviewed (0 or Unreviewed (81

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Fia-0380
ENSFALG00000008322.1
U3K0Y4
2
LLPS-Fia-0861
ENSFALG00000009275.1
U3K3R8
3
LLPS-Fia-1905
ENSFALG00000001950.1
U3JGX1
4
LLPS-Fia-3333
ENSFALG00000006583.1
U3JVR4
5
LLPS-Fia-0314
ENSFALG00000002838.1
U3JJK4
AGO2
6
LLPS-Fia-0159
ENSFALG00000000582.1
U3JCV0
AK2
7
LLPS-Fia-1028
ENSFALG00000011958.1
U3KBV2
APP
8
LLPS-Fia-0377
ENSFALG00000009001.1
U3K2Z7
ATXN2
9
LLPS-Fia-0465
ENSFALG00000010927.1
U3K8Q3
AURKA
10
LLPS-Fia-2329
ENSFALG00000001245.1
U3JEU1
C9orf72
11
LLPS-Fia-2969
ENSFALG00000011444.1
U3KA89
CBX1
12
LLPS-Fia-1053
ENSFALG00000012324.1
U3KCW9
CBX2
13
LLPS-Fia-0281
ENSFALG00000012881.1
U3KEJ2
CBX5
14
LLPS-Fia-0435
ENSFALG00000000124.1
U3JBH5
CCNT1
15
LLPS-Fia-3184
ENSFALG00000009871.1
U3K5J1
CDK7
16
LLPS-Fia-1217
ENSFALG00000001337.1
U3JF41
CDK9
17
LLPS-Fia-3459
ENSFALG00000014000.1
U3KHV9
CIRBP
18
LLPS-Fia-1340
ENSFALG00000009331.1
U3K3X4
CPEB2
19
LLPS-Fia-2103
ENSFALG00000003859.1
U3JMM8
CSTF2
20
LLPS-Fia-1403
ENSFALG00000001357.1
U3JF66
CTTN
21
LLPS-Fia-3574
ENSFALG00000001901.1
U3JGT4
DAB2IP
22
LLPS-Fia-0168
ENSFALG00000014010.1
U3KHX1
DAZAP1
23
LLPS-Fia-0805
ENSFALG00000000043.1
U3JB92
DCP2
24
LLPS-Fia-1270
ENSFALG00000010910.1
U3K8N4
DDX4
25
LLPS-Fia-0573
ENSFALG00000009831.1
U3K5F1
DDX6
26
LLPS-Fia-3813
ENSFALG00000006315.1
U3JUY7
DLGAP1
27
LLPS-Fia-3019
ENSFALG00000005140.1
U3JRF7
DYRK1A
28
LLPS-Fia-3185
ENSFALG00000004543.1
U3JPN2
EDC3
29
LLPS-Fia-2688
ENSFALG00000003676.1
U3JM50
EIF4G3
30
LLPS-Fia-3675
ENSFALG00000007753.1
U3JZ81
ESRP2
31
LLPS-Fia-2970
ENSFALG00000007089.1
U3JX95
EWSR1
32
LLPS-Fia-1542
ENSFALG00000008327.1
U3K0X6
FLNB
33
LLPS-Fia-0578
ENSFALG00000012085.1
U3KC61
FMR1
34
LLPS-Fia-3404
ENSFALG00000010875.1
U3K8R9
FYN
35
LLPS-Fia-2344
ENSFALG00000006445.1
U3JVB9
GAR1
36
LLPS-Fia-0876
ENSFALG00000000909.1
U3JDU1
GNL2
37
LLPS-Fia-3669
ENSFALG00000001150.1
U3JEJ4
GRB2
38
LLPS-Fia-3126
ENSFALG00000003880.1
U3JMP0
GSPT1
39
LLPS-Fia-3688
ENSFALG00000014395.1
U3KJ07
HNRNPA0
40
LLPS-Fia-0006
ENSFALG00000009527.1
U3K4H6
HNRNPA2B1
41
LLPS-Fia-1215
ENSFALG00000005716.1
U3JT61
HNRNPD
42
LLPS-Fia-3721
ENSFALG00000005709.1
U3JT46
HNRNPDL
43
LLPS-Fia-3163
ENSFALG00000012964.1
U3KET9
HNRNPH3
44
LLPS-Fia-0710
ENSFALG00000004414.1
U3JP88
IPO5
45
LLPS-Fia-3439
ENSFALG00000002323.1
U3JI33
ITSN1
46
LLPS-Fia-1452
ENSFALG00000002347.1
U3JI37
KPNA2
47
LLPS-Fia-0894
ENSFALG00000005533.1
U3JSK4
KPNB1
48
LLPS-Fia-2575
ENSFALG00000011738.1
U3KB60
LBR
49
LLPS-Fia-0299
ENSFALG00000003771.1
U3JMC5
LGALS3
50
LLPS-Fia-2902
ENSFALG00000013033.1
U3KF02
LOC101818836
51
LLPS-Fia-0751
ENSFALG00000009478.1
U3K4C8
LSM4
52
LLPS-Fia-1407
ENSFALG00000002762.1
U3JJC5
LYZ
53
LLPS-Fia-2100
ENSFALG00000012540.1
U3KDI2
MAP1LC3A
54
LLPS-Fia-2458
ENSFALG00000000804.1
U3JDH9
NBR1
55
LLPS-Fia-2212
ENSFALG00000013388.1
U3KG17
NUP153
56
LLPS-Fia-2305
ENSFALG00000011235.1
U3K9P3
NUP62
57
LLPS-Fia-0522
ENSFALG00000010169.1
U3K6I4
NUP98
58
LLPS-Fia-1569
ENSFALG00000005372.1
U3JS39
PABPC1L
59
LLPS-Fia-2080
ENSFALG00000009648.1
U3K4X2
PKM
60
LLPS-Fia-0038
ENSFALG00000003778.1
U3JMD3
PLK1
61
LLPS-Fia-3660
ENSFALG00000012259.1
U3KCR2
PRKAA2
62
LLPS-Fia-0665
ENSFALG00000008750.1
U3K275
PSPC1
63
LLPS-Fia-1020
ENSFALG00000013928.1
U3KHN1
PTBP1
64
LLPS-Fia-3236
ENSFALG00000000392.1
U3JC97
RARA
65
LLPS-Fia-2567
ENSFALG00000004027.1
U3JN51
RBFOX1
66
LLPS-Fia-2098
ENSFALG00000006378.1
U3JV50
RPL23A
67
LLPS-Fia-2481
ENSFALG00000001722.1
U3JG95
RPL5
68
LLPS-Fia-2976
ENSFALG00000009218.1
U3K3K9
SGO1
69
LLPS-Fia-1479
ENSFALG00000002384.1
U3JI79
SOS1
70
LLPS-Fia-0811
ENSFALG00000007803.1
U3JZD9
SQSTM1
71
LLPS-Fia-0566
ENSFALG00000001495.1
U3JFK2
SURF6
72
LLPS-Fia-2628
ENSFALG00000000009.1
U3JB56
SYN2
73
LLPS-Fia-0498
ENSFALG00000007199.1
U3JXL3
TARDBP
74
LLPS-Fia-1636
ENSFALG00000002173.1
U3JHL0
TIA1
75
LLPS-Fia-0859
ENSFALG00000010292.1
U3K6T0
TNPO1
76
LLPS-Fia-0128
ENSFALG00000012195.1
U3KCJ1
TNRC6B
77
LLPS-Fia-2663
ENSFALG00000000224.1
U3JBT7
TUBA1C
78
LLPS-Fia-0142
ENSFALG00000001114.1
U3JEG0
UBXN6
79
LLPS-Fia-2160
ENSFALG00000009888.1
U3K5L4
WASL
80
LLPS-Fia-0912
ENSFALG00000010989.1
U3K8W1
XPO1
81
LLPS-Fia-2510
ENSFALG00000002301.1
U3JHZ3
ZNF207