Corchorus capsularis      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 37 genes.  Reviewed (0 or Unreviewed (37

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Coc-0065
CCACVL1_02701
A0A1R3K6X7
CCACVL1_02701
2
LLPS-Coc-0355
CCACVL1_03197
A0A1R3K1Q9
CCACVL1_03197
3
LLPS-Coc-0886
CCACVL1_04098
A0A1R3JV58
CCACVL1_04098
4
LLPS-Coc-0121
CCACVL1_04232
A0A1R3JUK4
CCACVL1_04232
5
LLPS-Coc-1846
CCACVL1_05522
A0A1R3JJZ4
CCACVL1_05522
6
LLPS-Coc-1282
CCACVL1_05919
A0A1R3JIB4
CCACVL1_05919
7
LLPS-Coc-0279
CCACVL1_07017
A0A1R3JAG6
CCACVL1_07017
8
LLPS-Coc-2294
CCACVL1_08830
A0A1R3IYN6
CCACVL1_08830
9
LLPS-Coc-0018
CCACVL1_09288
A0A1R3IWW2
CCACVL1_09288
10
LLPS-Coc-2071
CCACVL1_11033
A0A1R3IN56
CCACVL1_11033
11
LLPS-Coc-2168
CCACVL1_11574
A0A1R3IKJ6
CCACVL1_11574
12
LLPS-Coc-1766
CCACVL1_12526
A0A1R3IF62
CCACVL1_12526
13
LLPS-Coc-0406
CCACVL1_12640
A0A1R3IEN2
CCACVL1_12640
14
LLPS-Coc-0475
CCACVL1_13034
A0A1R3ICN4
CCACVL1_13034
15
LLPS-Coc-1530
CCACVL1_13196
A0A1R3IBV1
CCACVL1_13196
16
LLPS-Coc-1879
CCACVL1_13810
A0A1R3I9H0
CCACVL1_13810
17
LLPS-Coc-0145
CCACVL1_14163
A0A1R3I846
CCACVL1_14163
18
LLPS-Coc-0460
CCACVL1_16611
A0A1R3HWC3
CCACVL1_16611
19
LLPS-Coc-1481
CCACVL1_17905
A0A1R3HPK9
CCACVL1_17905
20
LLPS-Coc-0734
CCACVL1_18078
A0A1R3HNB6
CCACVL1_18078
21
LLPS-Coc-1058
CCACVL1_18230
A0A1R3HM25
CCACVL1_18230
22
LLPS-Coc-1013
CCACVL1_18764
A0A1R3HJX5
CCACVL1_18764
23
LLPS-Coc-0940
CCACVL1_18775
A0A1R3HJW6
CCACVL1_18775
24
LLPS-Coc-0814
CCACVL1_18889
A0A1R3HJH8
CCACVL1_18889
25
LLPS-Coc-1272
CCACVL1_19350
A0A1R3HHA1
CCACVL1_19350
26
LLPS-Coc-1186
CCACVL1_20397
A0A1R3HBF6
CCACVL1_20397
27
LLPS-Coc-1508
CCACVL1_20951
A0A1R3H982
CCACVL1_20951
28
LLPS-Coc-0780
CCACVL1_22887
A0A1R3GWB8
CCACVL1_22887
29
LLPS-Coc-1542
CCACVL1_23962
A0A1R3GRK4
CCACVL1_23962
30
LLPS-Coc-0176
CCACVL1_24080
A0A1R3GR23
CCACVL1_24080
31
LLPS-Coc-1327
CCACVL1_25522
A0A1R3GJN5
CCACVL1_25522
32
LLPS-Coc-0089
CCACVL1_26408
A0A1R3GEY1
CCACVL1_26408
33
LLPS-Coc-1069
CCACVL1_27033
A0A1R3GCH9
CCACVL1_27033
34
LLPS-Coc-1456
CCACVL1_28601
A0A1R3G5Y4
CCACVL1_28601
35
LLPS-Coc-1914
CCACVL1_29036
A0A1R3G4B3
CCACVL1_29036
36
LLPS-Coc-0907
CCACVL1_30188
A0A1R3FYF2
CCACVL1_30188
37
LLPS-Coc-0170
CCACVL1_22253
A0A1R3H0L9
LSM4