Colletotrichum orbiculare      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 35 genes.  Reviewed (0 or Unreviewed (35

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Coo-0474
Cob_01320
N4VD15
ADK1
2
LLPS-Coo-0172
Cob_01284
N4UYF3
Cob_01284
3
LLPS-Coo-0237
Cob_01331
N4UUY7
Cob_01331
4
LLPS-Coo-0384
Cob_01608
N4V7Q3
Cob_01608
5
LLPS-Coo-0313
Cob_01825
N4UZN1
Cob_01825
6
LLPS-Coo-0635
Cob_03500
N4W1R3
Cob_03500
7
LLPS-Coo-0374
Cob_04322
N4W2C8
Cob_04322
8
LLPS-Coo-0871
Cob_04623
N4VY50
Cob_04623
9
LLPS-Coo-0122
Cob_04756
N4VF88
Cob_04756
10
LLPS-Coo-0822
Cob_04896
N4VSE9
Cob_04896
11
LLPS-Coo-0705
Cob_04973
N4VI76
Cob_04973
12
LLPS-Coo-0350
Cob_07055
N4VBK8
Cob_07055
13
LLPS-Coo-1087
Cob_07208
N4VUI0
Cob_07208
14
LLPS-Coo-0315
Cob_07383
N4VKM4
Cob_07383
15
LLPS-Coo-0114
Cob_07639
N4VNZ5
Cob_07639
16
LLPS-Coo-0169
Cob_07709
N4V7K8
Cob_07709
17
LLPS-Coo-0363
Cob_07953
N4VRY6
Cob_07953
18
LLPS-Coo-0589
Cob_08149
N4V656
Cob_08149
19
LLPS-Coo-0544
Cob_08652
N4VP61
Cob_08652
20
LLPS-Coo-1281
Cob_08654
N4V3Y7
Cob_08654
21
LLPS-Coo-1397
Cob_09578
N4VDV5
Cob_09578
22
LLPS-Coo-0991
Cob_09641
N4VI52
Cob_09641
23
LLPS-Coo-0139
Cob_10195
N4V194
Cob_10195
24
LLPS-Coo-0881
Cob_10200
N4V198
Cob_10200
25
LLPS-Coo-0023
Cob_10211
N4VFT6
Cob_10211
26
LLPS-Coo-0617
Cob_10300
N4UYH0
Cob_10300
27
LLPS-Coo-0081
Cob_10339
N4VB52
Cob_10339
28
LLPS-Coo-1140
Cob_10768
N4VGZ6
Cob_10768
29
LLPS-Coo-0918
Cob_10945
N4V877
Cob_10945
30
LLPS-Coo-0196
Cob_11000
N4UVQ9
Cob_11000
31
LLPS-Coo-0876
Cob_12003
N4V916
Cob_12003
32
LLPS-Coo-1426
Cob_12106
N4USB8
Cob_12106
33
LLPS-Coo-0403
Cob_12317
N4UQW8
Cob_12317
34
LLPS-Coo-0525
Cob_12609
N4UTB0
Cob_12609
35
LLPS-Coo-0423
Cob_13267
N4V0X5
Cob_13267