Aspergillus nidulans      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 36 genes.  Reviewed (0 or Unreviewed (36

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Asn-0756
ANIA_05122
Q5B2V8
adk1
2
LLPS-Asn-0458
ANIA_00745
C8VR90
ANIA_00745
3
LLPS-Asn-0151
ANIA_00906
G5EAZ4
ANIA_00906
4
LLPS-Asn-0625
ANIA_00926
C8VUP5
ANIA_00926
5
LLPS-Asn-0517
ANIA_01013
Q5BEL7
ANIA_01013
6
LLPS-Asn-1318
ANIA_01325
Q5BDQ5
ANIA_01325
7
LLPS-Asn-0777
ANIA_01401
C8VRM0
ANIA_01401
8
LLPS-Asn-0277
ANIA_01666
C8VNL5
ANIA_01666
9
LLPS-Asn-1445
ANIA_02080
Q5BBK0
ANIA_02080
10
LLPS-Asn-0021
ANIA_02751
Q5B9M9
ANIA_02751
11
LLPS-Asn-1282
ANIA_02989
C8VIY5
ANIA_02989
12
LLPS-Asn-0356
ANIA_03735
Q5B6U5
ANIA_03735
13
LLPS-Asn-1290
ANIA_04021
Q5B609
ANIA_04021
14
LLPS-Asn-0193
ANIA_04094
Q5B5T6
ANIA_04094
15
LLPS-Asn-0265
ANIA_04499
Q5B4N1
ANIA_04499
16
LLPS-Asn-0733
ANIA_05627
G5EB32
ANIA_05627
17
LLPS-Asn-0129
ANIA_05717
Q5B163
ANIA_05717
18
LLPS-Asn-1203
ANIA_05815
C8V088
ANIA_05815
19
LLPS-Asn-1280
ANIA_06060
C8V2U2
ANIA_06060
20
LLPS-Asn-0203
ANIA_06074
C8V2S8
ANIA_06074
21
LLPS-Asn-0716
ANIA_06893
Q5AXT7
ANIA_06893
22
LLPS-Asn-1184
ANIA_07572
Q5AVV8
ANIA_07572
23
LLPS-Asn-0361
ANIA_07700
Q5AVI0
ANIA_07700
24
LLPS-Asn-0382
ANIA_07746
C8VDL3
ANIA_07746
25
LLPS-Asn-0537
ANIA_08856
Q5AS74
ANIA_08856
26
LLPS-Asn-0048
ANIA_10010
C8VR18
ANIA_10010
27
LLPS-Asn-0266
ANIA_10164
C8VTL0
ANIA_10164
28
LLPS-Asn-0479
ANIA_10407
C8VHJ1
ANIA_10407
29
LLPS-Asn-0423
ANIA_10417
C8VHA5
ANIA_10417
30
LLPS-Asn-0019
ANIA_10712
C8VFT3
ANIA_10712
31
LLPS-Asn-a044
ANIA_11147
C8VLU9
ANIA_11147
32
LLPS-Asn-0912
ANIA_10781
C8V1T8
LSM4
33
LLPS-Asn-0437
ANIA_04000
Q5B630
pab1
34
LLPS-Asn-1498
ANIA_04888
P87208
pdcA
35
LLPS-Asn-0064
ANIA_05210
P22360
pkiA
36
LLPS-Asn-0343
ANIA_08865
Q96VK3
ptkA