Theobroma cacao      Cajal body


※ Cajal body introduction

    Cajal bodies is a kind of non-membrane-bound nuclear bodies, formation of such sub-organelles usually involves dynamic processes, which can move within the nucleoplasm except when transiently immobilized through interaction with chromatin (1). The Cajal body has been suggested to be associated with telomere maintenance and maturation of the splicing machinery and processing of histone mRNA (2;3), it is rich in ribonucleoprotein (RNP) complexes and characterized by the marker protein coilin that interacts with many factors and thereby serves as a platform for the assembly of Cajal bodies (1). WRAP53β has been demonstrated to be an essential Cajal Body Component, it guides SMN across the cell to Cajal Bodies, and phosphorylation of WRAP53β by ATM promotes its involvement in the DNA damage response (4). besides, Fam118 is a newly identified component of Cajal bodies that is required for Cajal body formation (5). Defects in Cajal body formation are linked to impaired cell proliferation and splicing (6). In fact, Cajal bodies are not essential in telomerase function and telomere elongation ,whereas certain Cajal body factors such as WRAP53β clearly play important roles in telomere homeostasis (1).

References
1. Henriksson, S., & Farnebo, M. (2015) On the road with WRAP53beta: guardian of Cajal bodies and genome integrity. Front Genet, 6, 91. PMID: 25852739
2. Machyna, M., Heyn, P., & Neugebauer, K. M. (2013) Cajal bodies: where form meets function. Wiley Interdiscip Rev RNA, 4(1), 17-34. PMID: 23042601
3. Hutten, S., Chachami, G., Winter, U., Melchior, F., & Lamond, A. I. (2014) A role for the Cajal-body-associated SUMO isopeptidase USPL1 in snRNA transcription mediated by RNA polymerase II. J. Cell. Sci., 127(Pt 5), 1065-1078. PMID: 24413172
4. Coucoravas, C., Dhanjal, S., Henriksson, S., Bohm, S., & Farnebo, M. (2017) Phosphorylation of the Cajal body protein WRAP53beta by ATM promotes its involvement in the DNA damage response. RNA Biol., 14(6), 804-813. PMID: 27715493
5. Li, Y., Fong, K. W., Tang, M., Han, X., Gong, Z., Ma, W, Chen, J. (2014) Fam118B, a newly identified component of Cajal bodies, is required for Cajal body formation, snRNP biogenesis and cell viability. J. Cell Sci., 127(Pt 9), 2029-2039. PMID:24569877
6. Lemm, I., Girard, C., Kuhn, A. N., Watkins, N. J., Schneider, M., Bordonne, R., & Luhrmann, R. (2006) Ongoing U snRNP biogenesis is required for the integrity of Cajal bodies. Mol. Biol. Cell, 17(7), 3221-3231. PMID:16687569


There are 19 genes.  Reviewed (0 or Unreviewed (19

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Thc-0607
TCM_000818
A0A061DP63
TCM_000818
2
LLPS-Thc-0006
TCM_003324
A0A061DMS8
TCM_003324
3
LLPS-Thc-0775
TCM_006886
A0A061DZ10
TCM_006886
4
LLPS-Thc-2094
TCM_014605
A0A061G5W0
TCM_014605
5
LLPS-Thc-0601
TCM_015226
A0A061G0C4
TCM_015226
6
LLPS-Thc-0041
TCM_022624
A0A061EV54
TCM_022624
7
LLPS-Thc-0696
TCM_024782
A0A061EX26
TCM_024782
8
LLPS-Thc-0311
TCM_025439
A0A061EZF8
TCM_025439
9
LLPS-Thc-0486
TCM_026443
A0A061F2U4
TCM_026443
10
LLPS-Thc-0156
TCM_027144
A0A061G885
TCM_027144
11
LLPS-Thc-1919
TCM_029986
A0A061GMR7
TCM_029986
12
LLPS-Thc-1672
TCM_036882
A0A061GHH1
TCM_036882
13
LLPS-Thc-0036
TCM_038810
A0A061GPH3
TCM_038810
14
LLPS-Thc-0069
TCM_039613
A0A061GSH9
TCM_039613
15
LLPS-Thc-0965
TCM_041353
A0A061GW11
TCM_041353
16
LLPS-Thc-1438
TCM_041798
A0A061GWW6
TCM_041798
17
LLPS-Thc-2091
TCM_042243
A0A061H0E4
TCM_042243
18
LLPS-Thc-0763
TCM_044678
A0A061FR43
TCM_044678
19
LLPS-Thc-1875
TCM_046691
A0A061DXR8
TCM_046691