Vigna radiata      Pyrenoid matrix


※ Pyrenoid matrix introduction

    Pyrenoids are non-membrane-bound, proteinaceous structures that contain a matrix packed with the CO2-fixing enzyme Rubisco. In many species, the matrix is traversed by membrane tubules that are continuous with the photosynthetic thylakoid membranes (1). Pyrenoids are a central feature of the algal CO2 concentrating mechanism, which supplies Rubisco with a high concentration of its substrate CO2, enabling more efficient carbon capture than that of most land plants. Pyrenoids are found within the chloroplasts of a diverse array of photosynthetic eukaryotes, including nearly all freshwater and marine algae, as well as a group of non-vascular plants (2).

Reference
1. Freeman R. E., Xu B., et al. (2017) The Eukaryotic CO2-Concentrating Organelle Is Liquid-like and Exhibits Dynamic Reorganization. Cell, 171(1), 148-162.e19. PMID: 28938114
2. Wang Y., et al. (2015) The CO2 concentrating mechanism and photosynthetic carbon assimilation in limiting CO2 : how Chlamydomonas works against the gradient. Plant J., 82(3), 429-48. PMID: 25765072


There are 34 genes.  Reviewed (0 or Unreviewed (34

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Vir-a003
vigra.VC1973A.gnm6.ann1.Vradi11g04750
2
LLPS-Vir-a009
vigra.VC1973A.gnm6.ann1.Vradi03g00210
3
LLPS-Vir-a019
vigra.VC1973A.gnm6.ann1.Vradi11g10090
4
LLPS-Vir-a022
vigra.VC1973A.gnm6.ann1.Vradi08g13980
5
LLPS-Vir-a006
vigra.VC1973A.gnm6.ann1.Vradi06g00580
Q9LKI1
CipLhcb2
6
LLPS-Vir-1492
vigra.VC1973A.gnm6.ann1.Vradi07g17370
Q9XQB4
CipPsaF
7
LLPS-Vir-a016
vigra.VC1973A.gnm6.ann1.Vradi0007s01990
A0A1S3TBP8
LOC106753842
8
LLPS-Vir-2220
vigra.VC1973A.gnm6.ann1.Vradi0111s00360
A0A1S3TE66
LOC106754550
9
LLPS-Vir-0921
vigra.VC1973A.gnm6.ann1.Vradi03g00570
A0A1S3TLU2
LOC106756705
10
LLPS-Vir-1302
vigra.VC1973A.gnm6.ann1.Vradi03g04200
A0A1S3TN67
LOC106757122
11
LLPS-Vir-1453
vigra.VC1973A.gnm6.ann1.Vradi03g07390
A0A1S3TRC0
LOC106757979
12
LLPS-Vir-a013
vigra.VC1973A.gnm6.ann1.Vradi04g03400
A0A1S3TRT4
LOC106758099
13
LLPS-Vir-a000
vigra.VC1973A.gnm6.ann1.Vradi05g00530
A0A1S3TZ75
LOC106760144
14
LLPS-Vir-a023
vigra.VC1973A.gnm6.ann1.Vradi05g08700
A0A1S3U1Q2
LOC106760974
15
LLPS-Vir-a014
vigra.VC1973A.gnm6.ann1.Vradi05g14410
A0A1S3U707
LOC106762405
16
LLPS-Vir-a002
vigra.VC1973A.gnm6.ann1.Vradi01g10940
A0A1S3UB09
LOC106763549
17
LLPS-Vir-1863
vigra.VC1973A.gnm6.ann1.Vradi06g01850
A0A1S3UFT9
LOC106764942
18
LLPS-Vir-a001
vigra.VC1973A.gnm6.ann1.Vradi01g08300
A0A1S3UH34
LOC106765284
19
LLPS-Vir-a005
vigra.VC1973A.gnm6.ann1.Vradi07g22300
A0A1S3UNM8
LOC106767270
20
LLPS-Vir-a017
vigra.VC1973A.gnm6.ann1.Vradi07g29860
A0A1S3UU32
LOC106768779
21
LLPS-Vir-a012
vigra.VC1973A.gnm6.ann1.Vradi07g12120
A0A1S3UXQ1
LOC106769581
22
LLPS-Vir-a007
vigra.VC1973A.gnm6.ann1.Vradi08g17250
A0A1S3UY69
LOC106769639
23
LLPS-Vir-a018
vigra.VC1973A.gnm6.ann1.Vradi08g20640
A0A1S3V694
LOC106772136
24
LLPS-Vir-a015
vigra.VC1973A.gnm6.ann1.Vradi08g13110
A0A1S3V872
LOC106772487
25
LLPS-Vir-a021
vigra.VC1973A.gnm6.ann1.Vradi08g01360
A0A1S3V935
LOC106772686
26
LLPS-Vir-a010
vigra.VC1973A.gnm6.ann1.Vradi01g01180
A0A1S3VER0
LOC106774272
27
LLPS-Vir-0818
vigra.VC1973A.gnm6.ann1.Vradi09g07740
A0A1S3VEQ4
LOC106774376
28
LLPS-Vir-a008
vigra.VC1973A.gnm6.ann1.Vradi10g07730
A0A1S3VFI7
LOC106774530
29
LLPS-Vir-a004
vigra.VC1973A.gnm6.ann1.Vradi10g04120
A0A1S3VGU4
LOC106775059
30
LLPS-Vir-a011
vigra.VC1973A.gnm6.ann1.Vradi10g09290
A0A1S3VK74
LOC106775994
31
LLPS-Vir-0776
vigra.VC1973A.gnm6.ann1.Vradi11g06730
A0A1S3VRA4
LOC106777530
32
LLPS-Vir-1598
vigra.VC1973A.gnm6.ann1.Vradi0179s00340
A0A1S3W1E9
LOC106780329
33
LLPS-Vir-a020
vigra.VC1973A.gnm6.ann1.Vradi0396s00040
A0A1S3W160
LOC106780500
34
LLPS-Vir-1805
vigra.VC1973A.gnm6.ann1.Vradi01g08620
Q9XQB5
rbcS