Arabidopsis lyrata      Pyrenoid matrix


※ Pyrenoid matrix introduction

    Pyrenoids are non-membrane-bound, proteinaceous structures that contain a matrix packed with the CO2-fixing enzyme Rubisco. In many species, the matrix is traversed by membrane tubules that are continuous with the photosynthetic thylakoid membranes (1). Pyrenoids are a central feature of the algal CO2 concentrating mechanism, which supplies Rubisco with a high concentration of its substrate CO2, enabling more efficient carbon capture than that of most land plants. Pyrenoids are found within the chloroplasts of a diverse array of photosynthetic eukaryotes, including nearly all freshwater and marine algae, as well as a group of non-vascular plants (2).

Reference
1. Freeman R. E., Xu B., et al. (2017) The Eukaryotic CO2-Concentrating Organelle Is Liquid-like and Exhibits Dynamic Reorganization. Cell, 171(1), 148-162.e19. PMID: 28938114
2. Wang Y., et al. (2015) The CO2 concentrating mechanism and photosynthetic carbon assimilation in limiting CO2 : how Chlamydomonas works against the gradient. Plant J., 82(3), 429-48. PMID: 25765072


There are 40 genes.  Reviewed (0 or Unreviewed (40

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Arl-a013
fgenesh1_pm.C_scaffold_4001405
D7LIR8
ARALYDRAFT_321348
2
LLPS-Arl-a026
fgenesh1_pm.C_scaffold_8000833
D7MQW2
ARALYDRAFT_331490
3
LLPS-Arl-a005
fgenesh1_pg.C_scaffold_3001782
D7KE20
ARALYDRAFT_342019
4
LLPS-Arl-a023
fgenesh2_kg.1__658__AT1G06820.1
D7KG68
ARALYDRAFT_470704
5
LLPS-Arl-0467
fgenesh2_kg.1__979__AT1G09340.1
D7KJP2
ARALYDRAFT_471025
6
LLPS-Arl-a016
fgenesh2_kg.1__1879__AT1G17220.1
D7KFC9
ARALYDRAFT_471925
7
LLPS-Arl-a017
fgenesh2_kg.1__2093__AT1G19150.1
D7KHA6
ARALYDRAFT_472139
8
LLPS-Arl-a007
fgenesh2_kg.1__3184__AT1G30120.1
D7KEQ8
ARALYDRAFT_473230
9
LLPS-Arl-a025
fgenesh2_kg.1__3426__AT1G32900.1
D7KID6
ARALYDRAFT_473472
10
LLPS-Arl-a003
fgenesh2_kg.1__3551__AT1G34430.1
D7KK66
ARALYDRAFT_473597
11
LLPS-Arl-1578
fgenesh2_kg.1__3594__AT1G31330.1
D7KL23
ARALYDRAFT_473640
12
LLPS-Arl-a015
fgenesh2_kg.1__4679__AT1G54500.1
D7KP11
ARALYDRAFT_474725
13
LLPS-Arl-2541
fgenesh2_kg.2__304__AT1G61520.1
D7KVK2
ARALYDRAFT_475174
14
LLPS-Arl-0720
fgenesh2_kg.2__935__AT1G67090.1
D7KUZ2
ARALYDRAFT_475805
15
LLPS-Arl-a024
fgenesh2_kg.2__1571__AT1G73110.1
D7KR72
ARALYDRAFT_476441
16
LLPS-Arl-a014
fgenesh2_kg.3__459__AT3G04870.2
D7L2Z6
ARALYDRAFT_477758
17
LLPS-Arl-0113
fgenesh2_kg.3__1864__AT3G16950.2
D7L694
ARALYDRAFT_479163
18
LLPS-Arl-2041
fgenesh2_kg.4__2058__AT2G39730.1
D7LDR2
ARALYDRAFT_482998
19
LLPS-Arl-a020
fgenesh2_kg.5__36__AT2G01320.2
D7LLQ0
ARALYDRAFT_484044
20
LLPS-Arl-2701
fgenesh2_kg.5__1104__AT3G47470.1
D7LND9
ARALYDRAFT_485112
21
LLPS-Arl-2047
fgenesh2_kg.5__1662__AT3G52960.1
D7LUC9
ARALYDRAFT_485670
22
LLPS-Arl-a002
fgenesh2_kg.5__1810__AT3G54210.1
D7LUR6
ARALYDRAFT_485818
23
LLPS-Arl-1848
fgenesh2_kg.5__2683__AT3G61870.1
D7LSQ2
ARALYDRAFT_486691
24
LLPS-Arl-a021
fgenesh2_kg.6__410__AT5G04900.1
D7LY72
ARALYDRAFT_487276
25
LLPS-Arl-a008
fgenesh2_kg.6__3400__AT4G02930.1
D7M3B6
ARALYDRAFT_490266
26
LLPS-Arl-0762
fgenesh2_kg.7__493__AT4G35800.1
D7MC36
ARALYDRAFT_491060
27
LLPS-Arl-a004
fgenesh2_kg.7__2073__AT4G22260.1
D7ME58
ARALYDRAFT_492640
28
LLPS-Arl-a001
fgenesh2_kg.8__2713__AT5G67030.1
D7MKU3
ARALYDRAFT_496897
29
LLPS-Arl-1500
Al_scaffold_0009_153
D7MVJ5
ARALYDRAFT_683115
30
LLPS-Arl-a010
scaffold_100406.1
D7KDF0
ARALYDRAFT_887612
31
LLPS-Arl-a009
scaffold_101288.1
D7KMI7
ARALYDRAFT_888494
32
LLPS-Arl-a006
scaffold_303245.1
D7L839
ARALYDRAFT_899275
33
LLPS-Arl-1389
scaffold_303291.1
D7L8M3
ARALYDRAFT_899321
34
LLPS-Arl-a012
scaffold_600145.1
D7M797
ARALYDRAFT_908088
35
LLPS-Arl-a011
scaffold_600296.1
D7LWS4
ARALYDRAFT_908239
36
LLPS-Arl-a022
scaffold_700231.1
D7M980
ARALYDRAFT_912489
37
LLPS-Arl-2310
scaffold_802811.1
D7MV45
ARALYDRAFT_919411
38
LLPS-Arl-a019
fgenesh2_kg.7__1761__AT4G25080.3
D7MGJ7
CHLM
39
LLPS-Arl-2328
fgenesh2_kg.4__169__AT2G22480.1
D7LE10
PFK
40
LLPS-Arl-a018
scaffold_201018.1
D7KR12
rpl33